FFCP PHASE1:Hg19::chr10:90640185..90640282,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:90640185..90640282,+ to FFCP PHASE1:Hg19::chr10:90640185..90640282,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57559 | |EntrezGene=57559 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24105 | |HGNC=24105 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FJ0 | |UniProt=Q96FJ0 | ||
|association_with_transcript=159bp_to_NM_020799,uc001kfk.2,uc010qmx.1_5end | |||
|cluster_id=chr10:90640185..90640282,+ | |||
|description=CAGE_peak_2_at_STAMBPL1_5end | |||
|id=chr10:90640185..90640282,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.86e-07!53;CL:0000051!4.86e-07!53;CL:0000838!9.35e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.17e-07,53;CL:0000051,8.17e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.34e-11!123;UBERON:0000153!7.91e-11!129;UBERON:0007811!7.91e-11!129;UBERON:0001049!1.85e-10!57;UBERON:0005068!1.85e-10!57;UBERON:0006241!1.85e-10!57;UBERON:0007135!1.85e-10!57;UBERON:0003080!1.30e-09!42;UBERON:0002780!1.57e-09!41;UBERON:0001890!1.57e-09!41;UBERON:0006240!1.57e-09!41;UBERON:0002616!1.69e-09!59;UBERON:0000955!3.20e-09!69;UBERON:0006238!3.20e-09!69;UBERON:0002619!7.19e-09!22;UBERON:0000073!1.25e-08!94;UBERON:0001016!1.25e-08!94;UBERON:0000481!1.47e-08!347;UBERON:0002346!1.52e-08!90;UBERON:0001869!1.68e-08!32;UBERON:0000924!2.19e-08!173;UBERON:0006601!2.19e-08!173;UBERON:0001950!2.33e-08!20;UBERON:0001017!2.56e-08!82;UBERON:0003056!3.72e-08!61;UBERON:0005743!5.10e-08!86;UBERON:0003075!6.72e-08!86;UBERON:0007284!6.72e-08!86;UBERON:0002020!7.14e-08!34;UBERON:0003528!7.14e-08!34;UBERON:0001893!7.40e-08!34;UBERON:0004121!8.10e-08!169;UBERON:0002791!1.98e-07!33;UBERON:0000956!3.45e-07!25;UBERON:0000203!3.45e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.40e-09;22!UBERON:0001950;1.04e-08;20!UBERON:0001869;2.74e-07;32!UBERON:0001737;4.64e-07;9!UBERON:0001557;4.64e-07;9!UBERON:0000956;6.04e-07;25!UBERON:0000203;6.04e-07;25!UBERON:0002791;9.39e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.71e-10,56;UBERON:0005068,7.71e-10,56;UBERON:0006241,7.71e-10,56;UBERON:0007135,7.71e-10,56;UBERON:0000073,9.20e-10,53;UBERON:0002616,9.20e-10,53;UBERON:0002619,1.72e-09,22;UBERON:0011216,2.25e-09,223;UBERON:0002780,2.53e-09,41;UBERON:0001890,2.53e-09,41;UBERON:0003080,2.53e-09,41;UBERON:0006240,2.53e-09,41;UBERON:0001950,5.92e-09,20;UBERON:0000955,5.97e-09,68;UBERON:0006238,5.97e-09,68;UBERON:0001016,1.41e-08,89;UBERON:0002346,1.42e-08,86;UBERON:0001869,1.83e-08,32;UBERON:0004121,2.09e-08,171;UBERON:0000924,2.09e-08,171;UBERON:0006601,2.09e-08,171;UBERON:0001017,5.21e-08,81;UBERON:0010314,6.03e-08,132;UBERON:0003075,6.72e-08,82;UBERON:0007284,6.72e-08,82;UBERON:0002791,7.49e-08,32;UBERON:0003528,7.85e-08,34;UBERON:0002020,7.85e-08,34;UBERON:0001893,1.12e-07,34;UBERON:0003056,1.76e-07,61;UBERON:0000956,4.48e-07,25;UBERON:0000203,4.48e-07,25;UBERON:0001737,6.89e-07,9 | |||
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| ||
|short_description=p2@STAMBPL1 | |||
}} | }} |
Latest revision as of 20:17, 19 September 2015
Short description: | p2@STAMBPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STAMBPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_NM_020799, uc001kfk.2, uc010qmx.1_5end |
EntrezGene: | STAMBPL1 |
HGNC: | 24105 |
UniProt: | Q96FJ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.17e-07 | 53 |
common lymphoid progenitor | 8.17e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
neural tube | 7.71e-10 | 56 |
neural rod | 7.71e-10 | 56 |
future spinal cord | 7.71e-10 | 56 |
neural keel | 7.71e-10 | 56 |
regional part of nervous system | 9.20e-10 | 53 |
regional part of brain | 9.20e-10 | 53 |
regional part of cerebral cortex | 1.72e-09 | 22 |
organ system subdivision | 2.25e-09 | 223 |
regional part of forebrain | 2.53e-09 | 41 |
forebrain | 2.53e-09 | 41 |
anterior neural tube | 2.53e-09 | 41 |
future forebrain | 2.53e-09 | 41 |
neocortex | 5.92e-09 | 20 |
brain | 5.97e-09 | 68 |
future brain | 5.97e-09 | 68 |
nervous system | 1.41e-08 | 89 |
neurectoderm | 1.42e-08 | 86 |
cerebral hemisphere | 1.83e-08 | 32 |
ectoderm-derived structure | 2.09e-08 | 171 |
ectoderm | 2.09e-08 | 171 |
presumptive ectoderm | 2.09e-08 | 171 |
central nervous system | 5.21e-08 | 81 |
structure with developmental contribution from neural crest | 6.03e-08 | 132 |
neural plate | 6.72e-08 | 82 |
presumptive neural plate | 6.72e-08 | 82 |
regional part of telencephalon | 7.49e-08 | 32 |
brain grey matter | 7.85e-08 | 34 |
gray matter | 7.85e-08 | 34 |
telencephalon | 1.12e-07 | 34 |
pre-chordal neural plate | 1.76e-07 | 61 |
cerebral cortex | 4.48e-07 | 25 |
pallium | 4.48e-07 | 25 |
larynx | 6.89e-07 | 9 |