FFCP PHASE1:Hg19::chr6:111136611..111136682,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19338 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BWU1 | |||
|association_with_transcript=-92bp_to_ENST00000368911_5end | |||
|cluster_id=chr6:111136611..111136682,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_CDK19_5end | |||
|id=chr6:111136611..111136682,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.44e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.89e-30!94;UBERON:0001016!3.89e-30!94;UBERON:0005743!1.38e-27!86;UBERON:0001049!3.35e-27!57;UBERON:0005068!3.35e-27!57;UBERON:0006241!3.35e-27!57;UBERON:0007135!3.35e-27!57;UBERON:0001017!1.84e-26!82;UBERON:0007023!3.29e-26!115;UBERON:0002346!9.76e-25!90;UBERON:0000955!4.20e-24!69;UBERON:0006238!4.20e-24!69;UBERON:0002780!1.82e-23!41;UBERON:0001890!1.82e-23!41;UBERON:0006240!1.82e-23!41;UBERON:0003075!1.86e-23!86;UBERON:0007284!1.86e-23!86;UBERON:0002616!3.86e-23!59;UBERON:0003080!2.16e-22!42;UBERON:0000924!8.12e-22!173;UBERON:0006601!8.12e-22!173;UBERON:0004121!1.27e-20!169;UBERON:0001893!2.72e-20!34;UBERON:0002020!2.85e-20!34;UBERON:0003528!2.85e-20!34;UBERON:0002791!1.10e-19!33;UBERON:0003056!4.54e-19!61;UBERON:0001869!6.03e-19!32;UBERON:0000153!7.86e-17!129;UBERON:0007811!7.86e-17!129;UBERON:0000033!4.53e-16!123;UBERON:0000956!1.54e-14!25;UBERON:0000203!1.54e-14!25;UBERON:0002619!3.73e-14!22;UBERON:0001950!5.14e-13!20;UBERON:0000481!3.59e-09!347;UBERON:0000064!4.60e-08!219;UBERON:0000475!6.74e-08!365;UBERON:0002308!3.01e-07!9;UBERON:0000125!3.01e-07!9;UBERON:0000922!3.71e-07!612;UBERON:0000062!4.38e-07!511;UBERON:0002420!9.96e-07!9;UBERON:0007245!9.96e-07!9;UBERON:0010009!9.96e-07!9;UBERON:0010011!9.96e-07!9;UBERON:0000454!9.96e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.58e-18;34!UBERON:0003528;1.95e-18;34!UBERON:0002020;1.95e-18;34!UBERON:0002780;2.69e-18;41!UBERON:0001890;2.69e-18;41!UBERON:0002791;2.82e-18;32!UBERON:0001869;3.10e-18;32!UBERON:0000073;1.93e-16;53!UBERON:0002616;1.93e-16;53!UBERON:0000956;2.12e-15;25!UBERON:0000203;2.12e-15;25!UBERON:0002619;8.03e-15;22!UBERON:0001950;1.29e-13;20!UBERON:0000955;2.04e-12;68!UBERON:0001017;1.09e-11;75!UBERON:0001016;1.12e-11;83!UBERON:0007023;1.51e-08;114!UBERON:0000922;5.52e-08;49!UBERON:0000125;1.25e-07;9!UBERON:0002308;1.25e-07;9!UBERON:0002420;6.79e-07;9!UBERON:0007245;6.79e-07;9!UBERON:0010009;6.79e-07;9!UBERON:0010011;6.79e-07;9!UBERON:0000454;6.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.34e-30,89;UBERON:0001049,3.72e-29,56;UBERON:0005068,3.72e-29,56;UBERON:0006241,3.72e-29,56;UBERON:0007135,3.72e-29,56;UBERON:0001017,1.16e-27,81;UBERON:0000073,3.02e-27,53;UBERON:0002616,3.02e-27,53;UBERON:0002346,5.95e-27,86;UBERON:0007023,3.54e-26,114;UBERON:0003075,1.30e-25,82;UBERON:0007284,1.30e-25,82;UBERON:0000955,2.00e-25,68;UBERON:0006238,2.00e-25,68;UBERON:0002780,2.18e-24,41;UBERON:0001890,2.18e-24,41;UBERON:0003080,2.18e-24,41;UBERON:0006240,2.18e-24,41;UBERON:0004121,1.75e-22,171;UBERON:0000924,1.75e-22,171;UBERON:0006601,1.75e-22,171;UBERON:0003056,1.41e-21,61;UBERON:0001893,4.45e-21,34;UBERON:0003528,4.68e-21,34;UBERON:0002020,4.68e-21,34;UBERON:0011216,1.03e-20,223;UBERON:0010314,1.41e-20,132;UBERON:0010371,4.54e-20,104;UBERON:0002791,1.00e-19,32;UBERON:0001869,1.13e-19,32;UBERON:0000956,4.40e-15,25;UBERON:0000203,4.40e-15,25;UBERON:0002619,1.11e-14,22;UBERON:0001950,1.70e-13,20;UBERON:0000125,1.74e-07,9;UBERON:0002308,1.74e-07,9;UBERON:0002420,6.03e-07,9;UBERON:0007245,6.03e-07,9;UBERON:0010009,6.03e-07,9;UBERON:0010011,6.03e-07,9;UBERON:0000454,6.03e-07,9 | |||
|phase1_expression=0.908391896352783,0.856402095563933,1.40954404095971,1.0007329835313,0.893922188854576,0.872338524100369,0,0,1.30592814099919,0.982935746006035,0,1.09220686065086,0.263766978228454,2.35156070624089,3.31397375727916,1.34465029290355,1.20538905604795,0,0.975865597581014,1.47745269692145,0.204000691244253,0.940364164434263,4.29353980696585,2.18999080116615,3.26410862946487,1.83392173795083,1.31360943119913,0.944529375764151,1.96682138424452,1.53531759238885,0.464448369948228,0,0.30120591877825,0,0.46480320348181,0.426507697462265,0.880801318004542,0,2.4065333696417,0.434021741431704,2.23915474239924,1.6194683300949,2.57575567634187,1.30858414901608,0.755751887377619,0.242584061187816,0.232429036905685,0.411167888021826,1.54853185447552,0.28769239232215,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.674170453335254,0.612167784741805,0,0,0,0.797854630486527,0.852449501065388,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0.211255286311942,1.06302149982522,0.419317291016752,0.786300418025466,1.20141514273205,1.12507910687956,1.42506371870624,1.39241674039363,0.91332076882317,1.75996244461323,1.09227722252426,6.22656477704488,2.13365111283254,3.2031678962881,2.29900975981793,1.98313461835459,1.90810750907073,1.70763890732835,1.76171156811282,1.52909291250092,0,0,1.58030450865046,1.7703879310245,1.57204305099666,0.205601498999509,0.501559486172034,1.30368906653436,0.946895611469467,0,0.779873198196215,0.294605907474837,0.221533894583621,0,0.384273959177026,0.910415432919148,0.822189523018381,1.10540007114339,0.579606171470105,0.741432815810302,0.267540828089713,0,0.793165398882963,0.383220493601921,0.34362744548263,0.506039384039006,0.95569624297229,0,0,1.05402583354441,1.02389288923535,1.24930726552346,0.710331756132051,1.64225599384209,1.00803371612366,1.06976078313403,0.868946423296794,4.87613732627923,0.670700859703636,1.15076305659177,0.722878304769133,2.50668955317945,1.01392563272577,1.5905718941022,0,2.26883561193763,1.33037638477538,2.72287835648691,5.89405839739707,0.728590576585084,0,0.649094787309367,0.696518949197069,1.19662164466979,0.715471872916026,0,0,1.19257444420023,2.58070378531837,0,0,0.838998872419812,0.825354125820202,0,1.29208379584664,1.06729878806013,1.33888245105868,1.20848795132744,0,1.22031028774085,0,4.0507097394088,1.60739510911344,2.2452937262617,0.900891843866578,0,0.949265659568129,0.916008719652036,2.63560834872127,0,1.74437620857014,1.49091585508596,1.77282716330412,1.58891016975863,2.29469296599051,1.77334191099179,1.68203280042692,0,2.4666754841716,3.11211035399766,1.21239604862719,0.980771418680752,0.908144565869588,3.45705554687999,0.937285727335186,1.5608003841516,0.570471821544449,1.64393548606981,2.93586246609412,1.45685649931318,2.10676210053373,1.63323337003915,1.35117749042945,2.78979609174567,3.56400857184616,3.21447008062124,0,0,2.02003336744879,3.62843707628696,1.38532057742091,1.31693286264251,1.5324389789951,3.45547535485173,0.794025282120147,1.25572744982203,2.13557388818567,1.90738711043606,0.600182192168805,1.23663035086127,1.54584324027377,2.60563598864226,1.18143432568886,0.974370051611986,1.26216887122057,2.66944706062668,1.93975268182574,1.06502877754984,1.91428986632517,1.18692414617341,0.57978255948989,0.545492241181669,0.573609190778008,4.63500083292463,4.5060121229305,2.44007280025989,3.93912009058408,2.77552935963191,5.10968302706162,0,3.85944562915731,4.14404764057442,2.3218396401599,0,1.41968160047813,0.674338760312407,1.44606617930089,0.661763836394364,1.74303555273925,1.66089433377768,0.539325232640658,0.588664395376038,0.38474715694639,0.738155454624648,0,0.4115740113314,0,7.60530208930985,0.982827216677626,2.95394953340702,2.6487785964879,2.33678033231916,2.57351715447788,0.768251997860379,1.1240175325762,0.402115889646523,1.11106134190236,1.62904152655162,1.03993478527958,1.44331342025273,4.40535538905292,2.46558257895225,0.577465791044295,0,0.190254152234598,2.37061319387782,1.71697232418975,2.46217006087397,0.702012795417713,0.891786973732369,0,0.16798212819886,1.27597587518148,1.25381931783988,0,1.15014803749563,0.492663237895943,1.14462964217194,1.24396869324463,1.44119953416961,1.13618190083742,1.0159663086747,2.29193055334967,0,0,1.23392991243988,1.20137223137567,2.85826432630578,1.56983518083505,0.87192013766656,1.39342743059805,1.42198887333556,0,0,2.92531928243358,0,1.28603687131071,0,0.799266537048298,1.28680194292333,2.71310802695722,2.46972101034231,0.325736184293735,2.13235169245527,0.791951872933429,0.602878754119172,2.61460037580088,0.799783929456456,0,2.51128545716063,0,0.958499421966331,2.29723871668228,4.27910715122155,0.723906533337896,1.2328579353023,0.716243852959582,2.69004345584465,1.77327684181734,0.646882724578552,2.43851768931522,1.52456774533478,5.20559415430487,8.50617694055465,7.203199409377,2.55175500661265,5.99205619157746,0,4.97298616123243,3.18997878469764,1.50051156317903,1.89885516589815,1.24782516918484,1.24900292158013,1.10391690523754,1.40569697991256,3.31040709700491,0,0,0.664225598535437,1.29058417979192,2.43274120510632,1.37060810223918,1.02943027143257,1.03384013061444,1.07857100409308,0.320182673410333,2.12189300012382,0,1.5119514666484,1.24053903909388,0.61384789315225,0.561320188866147,2.17836553734692,0,1.12597744800525,0,0,0.710246901252508,0.98552587216571,2.07701771673448,0.232420756919918,2.53804844142407,1.80455823272956,4.9723734025384,1.14814448164607,1.63882051206045,0.655622074797121,2.70719767744447,1.46329140498388,1.56869953835371,0,1.26661954671451,0,0.850468526382578,1.29549549661284,0,1.08378575017541,2.00675909541941,0.509752546090077,0.831076008928724,0.895499018888713,5.92001666944023,5.49014447152291,2.82095137628028,2.62411716559765,3.57916234130733,4.12164046590889,2.7470839445503,2.47528499761764,1.14853107599234,0.650060246036521,3.21367859688319,4.54352375972973,2.15668063960502,0.614014698904518,0.689182862422653,3.86712881525785,3.33538396002726,0.852266274161009,3.20515328328254,0.330569830721956,2.88285101047659,1.91419068741876,3.8439956725109,1.85938219718914,1.25924938732256,0,0.616067160352178,0,0.869932992075073,0.37064843820784,1.00187420719394,1.48863347743867,0.316379424718726,1.71567174531442,0.255897791311334,4.2793898803392,1.27281299170375,0,1.2591072030832,1.92175920815238,1.7671860351853,0.404364963146632,1.58510321173008,0.421258456238981,0.48763373908959,0.974853958525138,0,1.63799893689583,1.55545975149084,0,1.10273068709225,0,0.876901770507525,2.89387767133344,0.655894752046633,0.608731130888112,0.92947049429925,0.281695602532241,1.72093622644862,0.982490410131212,0.35667105148125,2.48332744849418,0.844430541190656,1.31717957183961,1.89736586882858,1.39973888097993,0.769776901804097,0,0,5.08376524194607,0.43050537267123,1.68471475667626,0,1.83778720165568,0.507447609232169,1.52927441428475,3.41788312304498,1.42939065274673,2.87953591160336,0.648473311192717,1.62009431171434,0,1.38871292465715,17.3246373947405,0.980160863924127,0.185803175125719,2.01976898167023,1.35169502361987,0.478278818186467,0.798317485731266,1.34053759092657,2.11673582723883,0.973865820823666,0.561594356226918,1.36940807419915,1.09675927041116,2.50634477090067,0.169291777801603,1.76646882614069,2.01799707191048,2.98092366383228,0.687010689511529,0.921722292925374,2.01308497103174,1.33479313369527,0.781552381608161,1.39203086947621,2.46174797895425,0.540911356951966,0.99921590399346,5.63948020351398,0.935702702041099,2.3441308683503,2.54857095673978,1.78309414843965,2.27308917445131,2.3874448473769,2.07875276582847,5.22173193568695,2.98244294329889,12.3789086441251,2.56010021552684,0.494411622680279,9.50064336575971,2.59022384726391,2.76283915531148,3.02319297425131,1.84083628503879,2.33861130376032,0.311039587661807,0.0898683511473268,1.79021174675609,1.02314474045374,3.35387579165574,2.3948309234694,1.11136990144637,8.72399471485697,9.09127361986142,1.99613798001194,7.55240507147176,3.58585999984402,0.724999575434793,1.365521379426,1.5255219017566,0.945550727071745,8.27384095779515,6.70690610781485,6.7713748023984,9.74315524395223,13.5068011260457,16.7839909948792,19.1302119681019,11.8219047581419,6.80094731177315,3.59496929612668,1.95193241990045,6.61772223132655,1.93701494939902,5.07240589653732,4.48788222048861,3.25942115766024,3.19001159731919,1.09917112082235,1.5991043280559,0,2.04074333313532,2.82559859230266,6.76786981851542,5.88187602953219,3.35643173951685,3.03605972358696,5.56278026431325,1.26598838716816,0.326465616318295,1.69623685720729,5.84249327303646,0.995261931078505,4.59979335417364,5.49927130440263,2.6686901581256,1.97702302314405,1.98401704060365,21.1639557559326,8.02577647298789,13.118808960619,1.27718352450966,1.76098157038881,4.37004683161367,2.36750641709634,3.62972148145992,14.385419796633,1.64285107034069,2.70582154946087,2.17745201934219,5.31723098165748,3.97190347050599,4.39506085770115,4.77889719091835,0.284609546029793,2.63481878724963,1.56203764501618,2.25382514053069,0.957651272384428,3.31980669659857,0.859930162358083,1.35458863804719,1.97341156132701,1.47807822695777,2.71569246167574,12.9736506236505,8.3612874088797,2.19267079434801,0.993573058514948,10.6995245165435,2.73771935828724,0.801588202515337,4.26905989478705,1.19885765749278,1.58499458869517,4.23785405813888,1.20116498503375,3.60136994970374,1.49103042678519,2.82832841540154,1.63085047288337,2.09205692624666,1.52997326454483,3.46740707881823,15.0105072177447,22.4524821382869,0,2.14882720709979,0.788662062837943,1.95497680890578,4.81236890424536,4.30723814746088,1.99679000498991,0.858452096273142,2.67805748930247,7.05426461110626,0.720599767084807,16.3094329338435,1.41809728153003,1.15382201733633,2.08950985947973,1.27955725969173,1.27009998098677,7.95229689809303,12.1221031439302,1.12527203925513,0.825236619583403,2.49264202817511,0.899895566206002,0.77380195455795,9.17318305536172,1.34173875039706,1.73372556058236,5.92736845925479,2.95680942254338,1.6135860539956,3.64638874906946,2.1440859791201,0.662091970365432,1.27134268827375,0.542999601753713,1.72844298240254,0.979762080328227,0,2.54486814322951,1.36310417428337,0.339936274560377,2.4913879725274,0,13.5747104179628,11.9009341568421,2.73738940614927,1.40963004463334,2.77647272676006,6.75978511928564,3.72815149812476,0.992332043623902,0.395223263795889,0.365377795142688,3.19170628885091,1.08803560673895,1.0027595760908,0.919036730290385,3.60659893780785,7.85270481251171,7.08854543973589,9.64007492725509,12.1435202785305,6.88091034828085,9.31804032909559,11.984605767687,8.71596400098254,0.74988244777264,1.66814029295813,3.99651466962954,1.17632909849086,6.55668868129634,3.76794674388145,0.298509605773748,0.701139929541673,1.10961172300523,2.46223906857616,2.0125432140206,0.889811221596536,2.51724075236616,2.26846385644859,1.39893480524502,0.591420599958536,1.59296767163702,1.79921244865442,1.70789252563885,0.414706207840855,1.32920857278997,0,1.20206087197775,0.761610424337591,0.813741466409323,1.09109195521536,1.28892668450986,0.464033759878494,0.398095888698616,1.60011105865261,0.343395705182793,1.34699795506368,2.52369796457302,3.27453711692416,1.07220795687463,1.30497145982606,0.453411851024545,0.926089897295336,1.46842022703881,0.179088841081487,0.617602894321944,1.09642024789354,0.176689145945881,0.578742114812744,1.01365464391844,2.30617366729152,0.690860683462397,1.21543982470953,17.4205629551181,0.974301544196942,2.25870228532717,0.654261577023377,3.93131818615695,0.737318726261158,0.845248493434508,1.39991177098451,1.06691729694141,0.516644938982447,1.13503190713367,0.736423801007363,1.95831310807222,1.86623178009892,7.80155664952275,6.68513830659427,3.14531883711793,11.7946409247375,1.69732529954025,5.95209776284712,4.33775174906508,7.26238393365217,0.954013051960256,2.12926711503384,2.40171224485641,1.76337971845342,0.6124909547064,10.7905098162052,8.5017945795351,20.2735001002582,7.17907274842643,9.83079615264701,11.6875756664528,11.4647708398614,15.704636228507,2.45369296252564,2.00548529691159,0.917142992608395,1.96393632455575,1.90691047733584,2.7614397042404,1.79024599904647,3.76051641746286,0.80682027481408,0.781514011233092,1.83334686136996,2.78412259767164,1.6264169483875,11.1437014620351,12.4972495778216,15.9148833305912,9.63920314947384,8.20462213527329,0,6.45074531906083,11.4316308833753,0.127762427639595,7.49982570229601,6.38939072215766,2.42786241694653,5.00856820972855,8.16061805496277,1.26757386311357,1.8863681038116,8.63215608805763,8.61623333673323,1.65471377237555,1.89093383216518,5.18054412813393,13.6690563226922,5.88571542958957,6.39211104356647,0.863710364874486,3.8220135030964,5.36074081324923,7.58465336317088,0.697448552208751,2.43401581223611,3.20684545892101,2.48659396995644,0.85359238546975,4.83881763269864,0,1.65664801022791,2.89725576181136,1.27016115057279,0.68732060563215,0.62041277132864,2.8666168169323,1.67783147696688,1.86485443868962,0.365753774946808,0.647428837187895,2.97722139883116,2.3196288626764,3.88568794447312,1.63757624423474,8.7538341071002,5.11356390343545,5.87319626602592,9.45488444010691,4.98177383770023,3.70435958918134,2.84127428655144,0.470317296361523,2.45148321753905,3.53514820652439,10.9932741584369,11.5848096127564,8.8757702792514,0.339854229375634,1.59772660565751,4.57651004612398,0.89947040332436,0.892769693028288,0.705789743431384,2.32699963398588,4.3820183294791,0.458729283404541,14.1906187319937,3.31320280605688,8.56692776405525,10.9087672585094,3.7031878836078,1.85997509083376,1.84870251452567,1.73050624849516,2.77566134637174,2.29457701123761,0.380095503034311,1.73381010561369,2.13773924212448,0.643264296743914,3.25919801080088,4.09204970378493,9.11078042531007,7.46252495512901,16.2389803503176,2.13233981900981,4.52322419781107,3.81074568032436,7.01444271543194,3.58821960257963,4.20071244635888,3.03175783437329,0.653150243690884,3.76456631193809,2.6940821205835,1.2192774916755,1.99596213927608,1.79087190944144,5.97673136915207,15.4457825829552,1.70667884002515,4.69281884806909,6.60103798587479,4.47585796147312,5.3260541934841,2.61655931668334,0.961705476909699 | |||
|short_description=p1@CDK19 | |||
}} |
Latest revision as of 20:08, 19 September 2015
Short description: | p1@CDK19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDK19_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -92bp_to_ENST00000368911_5end |
EntrezGene: | CDK19 |
HGNC: | 19338 |
UniProt: | Q9BWU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data