FFCP PHASE1:Hg19::chrX:1455724..1455733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3563 | |EntrezGene=3563 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6012 | |HGNC=6012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_ENST00000432757_5end | |association_with_transcript=35bp_to_ENST00000432757_5end | ||
|cluster_id=chrX:1455724..1455733,+ | |||
|description=CAGE_peak_3_at_IL3RA_5end | |description=CAGE_peak_3_at_IL3RA_5end | ||
|id=chrX:1455724..1455733,+ | |id=chrX:1455724..1455733,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.54e-43!42;CL:0000860!7.87e-40!45;CL:0002194!6.41e-30!63;CL:0000576!6.41e-30!63;CL:0000040!6.41e-30!63;CL:0000559!6.41e-30!63;CL:0000839!2.08e-29!70;CL:0000557!6.19e-29!71;CL:0002009!7.09e-29!65;CL:0000766!9.52e-27!76;CL:0002031!9.29e-20!124;CL:0002087!6.78e-19!119;CL:0000738!1.16e-18!140;CL:0000763!1.55e-18!112;CL:0000049!1.55e-18!112;CL:0000037!1.37e-15!172;CL:0000566!1.37e-15!172;CL:0002032!5.90e-15!165;CL:0000837!5.90e-15!165;CL:0000988!1.98e-14!182;CL:0000784!1.60e-08!3 | |ontology_enrichment_celltype=CL:0002057!5.54e-43!42;CL:0000860!7.87e-40!45;CL:0002194!6.41e-30!63;CL:0000576!6.41e-30!63;CL:0000040!6.41e-30!63;CL:0000559!6.41e-30!63;CL:0000839!2.08e-29!70;CL:0000557!6.19e-29!71;CL:0002009!7.09e-29!65;CL:0000766!9.52e-27!76;CL:0002031!9.29e-20!124;CL:0002087!6.78e-19!119;CL:0000738!1.16e-18!140;CL:0000763!1.55e-18!112;CL:0000049!1.55e-18!112;CL:0000037!1.37e-15!172;CL:0000566!1.37e-15!172;CL:0002032!5.90e-15!165;CL:0000837!5.90e-15!165;CL:0000988!1.98e-14!182;CL:0000784!1.60e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.67e-84;33!CL:0002057;2.67e-84;33!CL:0000473;3.52e-63;39!CL:0000234;3.52e-63;39!CL:0000576;2.17e-43;48!CL:0000766;5.12e-21;69!CL:0000784;1.32e-14;3!CL:0000763;1.01e-13;100!CL:0002087;8.11e-13;104!CL:0000738;1.69e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.48e-74,42;CL:0002057,7.48e-74,42;CL:0000473,2.44e-64,48;CL:0000234,2.44e-64,48;CL:0002194,3.51e-57,59;CL:0000576,3.51e-57,59;CL:0000040,3.51e-57,59;CL:0000559,3.51e-57,59;CL:0002009,2.92e-55,61;CL:0000839,5.81e-51,66;CL:0000557,3.54e-50,67;CL:0000766,1.41e-46,72;CL:0000763,2.16e-30,108;CL:0000049,2.16e-30,108;CL:0002087,2.09e-28,115;CL:0002031,3.96e-27,120;CL:0000738,1.66e-26,136;CL:0000037,5.31e-21,168;CL:0000988,8.29e-20,177;CL:0002032,1.29e-19,161;CL:0000837,1.29e-19,161;CL:0000784,1.23e-14,3;CL:0000134,1.48e-08,354;CL:0002320,2.47e-08,361;CL:0000219,1.49e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-52;42!CL:0000049;3.94e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.42e-25!80;UBERON:0001474!3.96e-23!86;UBERON:0002390!7.69e-21!102;UBERON:0003061!7.69e-21!102;UBERON:0004765!4.94e-19!101;UBERON:0001434!4.94e-19!101;UBERON:0002193!1.46e-18!112;UBERON:0002405!5.93e-18!115;UBERON:0002204!9.88e-10!167;UBERON:0003081!3.16e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.91e-44,76;UBERON:0001474,1.12e-40,82;UBERON:0004765,6.87e-37,90;UBERON:0002405,1.24e-35,93;UBERON:0002390,1.04e-33,98;UBERON:0003061,1.04e-33,98;UBERON:0001434,5.40e-33,100;UBERON:0002193,2.16e-30,108;UBERON:0002204,8.03e-19,167;UBERON:0003081,4.93e-15,203;UBERON:0000926,1.01e-08,315;UBERON:0004120,1.01e-08,315;UBERON:0006603,1.01e-08,315;UBERON:0002384,4.95e-08,371 | |||
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|short_description=p3@IL3RA | |short_description=p3@IL3RA | ||
}} | }} |
Latest revision as of 20:07, 19 September 2015
Short description: | p3@IL3RA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL3RA_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000432757_5end |
EntrezGene: | IL3RA |
HGNC: | 6012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.48e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.48e-74 | 42 |
defensive cell | 2.44e-64 | 48 |
phagocyte | 2.44e-64 | 48 |
monopoietic cell | 3.51e-57 | 59 |
monocyte | 3.51e-57 | 59 |
monoblast | 3.51e-57 | 59 |
promonocyte | 3.51e-57 | 59 |
macrophage dendritic cell progenitor | 2.92e-55 | 61 |
myeloid lineage restricted progenitor cell | 5.81e-51 | 66 |
granulocyte monocyte progenitor cell | 3.54e-50 | 67 |
myeloid leukocyte | 1.41e-46 | 72 |
myeloid cell | 2.16e-30 | 108 |
common myeloid progenitor | 2.16e-30 | 108 |
nongranular leukocyte | 2.09e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 3.96e-27 | 120 |
leukocyte | 1.66e-26 | 136 |
hematopoietic stem cell | 5.31e-21 | 168 |
hematopoietic cell | 8.29e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.29e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-19 | 161 |
plasmacytoid dendritic cell | 1.23e-14 | 3 |
mesenchymal cell | 1.48e-08 | 354 |
connective tissue cell | 2.47e-08 | 361 |
motile cell | 1.49e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.91e-44 | 76 |
bone element | 1.12e-40 | 82 |
skeletal element | 6.87e-37 | 90 |
immune system | 1.24e-35 | 93 |
hematopoietic system | 1.04e-33 | 98 |
blood island | 1.04e-33 | 98 |
skeletal system | 5.40e-33 | 100 |
hemolymphoid system | 2.16e-30 | 108 |
musculoskeletal system | 8.03e-19 | 167 |
lateral plate mesoderm | 4.93e-15 | 203 |
mesoderm | 1.01e-08 | 315 |
mesoderm-derived structure | 1.01e-08 | 315 |
presumptive mesoderm | 1.01e-08 | 315 |
connective tissue | 4.95e-08 | 371 |