FFCP PHASE1:Hg19::chrX:142722897..142722911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=139065 | |EntrezGene=139065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23502 | |HGNC=23502 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IW52 | |UniProt=Q8IW52 | ||
|association_with_transcript=107bp_to_ENST00000338017,NM_173078,uc004fbx.2_5end | |association_with_transcript=107bp_to_ENST00000338017,NM_173078,uc004fbx.2_5end | ||
|cluster_id=chrX:142722897..142722911,- | |||
|description=CAGE_peak_5_at_SLITRK4_5end | |description=CAGE_peak_5_at_SLITRK4_5end | ||
|id=chrX:142722897..142722911,- | |id=chrX:142722897..142722911,- | ||
|ontology_enrichment_celltype=CL:0000680!3.28e-09!57;CL:0000056!3.28e-09!57;CL:0000355!3.28e-09!57;CL:0000183!7.20e-08!59;CL:0000187!1.38e-07!54;CL:0000393!9.01e-07!60;CL:0000211!9.01e-07!60 | |ontology_enrichment_celltype=CL:0000680!3.28e-09!57;CL:0000056!3.28e-09!57;CL:0000355!3.28e-09!57;CL:0000183!7.20e-08!59;CL:0000187!1.38e-07!54;CL:0000393!9.01e-07!60;CL:0000211!9.01e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002494;1.50e-14;16!CL:0002548;1.75e-10;6!CL:0002195;1.35e-08;2!CL:0002571;1.35e-08;2!CL:0002539;5.93e-07;10 | |ontology_enrichment_celltype_v019=CL:0002494;1.50e-14;16!CL:0002548;1.75e-10;6!CL:0002195;1.35e-08;2!CL:0002571;1.35e-08;2!CL:0002539;5.93e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.42e-14,16;CL:0002548,1.57e-10,6;CL:0002195,2.06e-08,2;CL:0002571,2.06e-08,2;CL:0002539,6.03e-07,10 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.69e-07!14 | |ontology_enrichment_disease=DOID:2394!6.69e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.14e-16;14!DOID:120;9.90e-08;27!DOID:193;4.12e-07;29 | |ontology_enrichment_disease_v019=DOID:2394;4.14e-16;14!DOID:120;9.90e-08;27!DOID:193;4.12e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.13e-16,14;DOID:120,1.10e-07,27;DOID:193,4.53e-07,29 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000948;3.27e-10;22!UBERON:0007100;7.96e-09;25!UBERON:0005406;8.65e-09;2!UBERON:0004237;5.93e-07;10!UBERON:0004695;5.93e-07;10!UBERON:0002111;5.93e-07;10!UBERON:0004178;5.93e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0000948;3.27e-10;22!UBERON:0007100;7.96e-09;25!UBERON:0005406;8.65e-09;2!UBERON:0004237;5.93e-07;10!UBERON:0004695;5.93e-07;10!UBERON:0002111;5.93e-07;10!UBERON:0004178;5.93e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.77e-12,117;UBERON:0000948,9.96e-12,24;UBERON:0005498,9.96e-12,24;UBERON:0004140,9.96e-12,24;UBERON:0009881,9.96e-12,24;UBERON:0004141,9.96e-12,24;UBERON:0003084,9.96e-12,24;UBERON:0007005,9.96e-12,24;UBERON:0004139,9.96e-12,24;UBERON:0004291,9.96e-12,24;UBERON:0007100,3.08e-10,27;UBERON:0000025,6.71e-09,192;UBERON:0005406,7.28e-09,2;UBERON:0004872,1.64e-08,83;UBERON:0000490,2.04e-08,148;UBERON:0004535,1.59e-07,109;UBERON:0001009,3.23e-07,112;UBERON:0005256,4.35e-07,122;UBERON:0004237,6.03e-07,10;UBERON:0004695,6.03e-07,10;UBERON:0002111,6.03e-07,10;UBERON:0004178,6.03e-07,10;UBERON:0001134,7.49e-07,62;UBERON:0002036,7.49e-07,62;UBERON:0003082,7.49e-07,62 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.446961094427288,4.36169262050184,0,0,0,0,0,0,0,0.123766352960047,0,10.0848771967766,13.2592796165275,10.2243412654232,17.5655807564582,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0.300353785683013,0.64290234678832,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,3.96373941714944,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,1.25849830862972,1.92582629358047,3.34391946458897,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0.354668382198357,1.68203280042692,0,0,4.66816553099649,1.21239604862719,2.7788523529288,0,0,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,2.60894021268048,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,1.47008711385542,1.26755034821831,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.532844358032199,2.28764789853036,0,0,0,1.06617584622764,0.791951872933429,2.1100756394171,0.871533458600294,3.499054691372,0,0,0,0,0,0,1.30303176000821,0.410952645100767,0.895304816199478,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0.482561763430822,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.73886140225013,0,0,0,0,0.812839312631559,2.00675909541941,0.254876273045038,0,0,0,0,0,0.656029291399411,0,0,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0.413509717453592,0.107420244868274,0.145016693914229,0.255679882248303,0.623224249527161,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,1.89827654831236,5.52827562379092,0.511795582622668,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0.606547444719948,0,4.63384301862879,0,0.487426979262569,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.92947049429925,0,0.573645408816206,0.0982490410131212,0.7133421029625,0,0,0,0.379473173765715,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0.296964680832639,0,0,0.281338832821026,4.78627431598495,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0.371072392647405,1.99613798001194,0,0.262379999988587,0,0,0,0,0,0,0,0,0.241192877250816,0,0.774054819518572,0,1.09692698576986,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0.19871461170299,1.45614830698521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.546746009922222,0,0.394028536495991,0.629455057619977,0.211200673038813,3.22717210799121,0,0,0,0,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0.387848869084652,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.3755727921195,0,0.110929051536852,0.0620964029413835,1.38348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,2.21782724984451,4.30101271341996,10.7952746919265,0.310525913752519,0,1.59505028734797,1.04349012362347,1.20206087197775,1.90402606084398,1.22061219961398,0,0.322231671127465,1.39210127963548,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,1.86623178009892,0,0,0,0,0,0.425149840203366,0,0,0,0,0.80057074828547,0,0,0.770750701157514,1.41696576325585,0.159633859057151,0.41023272848151,1.00828678488687,0.553258019713743,0.807378228159255,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.317079050969534,0.546974809018219,0,0.496211178389294,0.879356221798103,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.328863867814245,0,0.111231401892069,0,0,0,0,0.647782773655864,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,7.08373367308104,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p5@SLITRK4 | |short_description=p5@SLITRK4 | ||
}} | }} |
Latest revision as of 19:52, 19 September 2015
Short description: | p5@SLITRK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLITRK4_5end |
Coexpression cluster: | NA |
Association with transcript: | 107bp_to_ENST00000338017, NM_173078, uc004fbx.2_5end |
EntrezGene: | SLITRK4 |
HGNC: | 23502 |
UniProt: | Q8IW52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.42e-14 | 16 |
cardiac fibroblast | 1.57e-10 | 6 |
hepatic stem cell | 2.06e-08 | 2 |
hepatic mesenchymal stem cell | 2.06e-08 | 2 |
aortic smooth muscle cell | 6.03e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 5.77e-12 | 117 |
heart | 9.96e-12 | 24 |
primitive heart tube | 9.96e-12 | 24 |
primary heart field | 9.96e-12 | 24 |
anterior lateral plate mesoderm | 9.96e-12 | 24 |
heart tube | 9.96e-12 | 24 |
heart primordium | 9.96e-12 | 24 |
cardiac mesoderm | 9.96e-12 | 24 |
cardiogenic plate | 9.96e-12 | 24 |
heart rudiment | 9.96e-12 | 24 |
primary circulatory organ | 3.08e-10 | 27 |
tube | 6.71e-09 | 192 |
perirenal fat | 7.28e-09 | 2 |
splanchnic layer of lateral plate mesoderm | 1.64e-08 | 83 |
unilaminar epithelium | 2.04e-08 | 148 |
cardiovascular system | 1.59e-07 | 109 |
circulatory system | 3.23e-07 | 112 |
trunk mesenchyme | 4.35e-07 | 122 |
blood vessel smooth muscle | 6.03e-07 | 10 |
arterial system smooth muscle | 6.03e-07 | 10 |
artery smooth muscle tissue | 6.03e-07 | 10 |
aorta smooth muscle tissue | 6.03e-07 | 10 |
skeletal muscle tissue | 7.49e-07 | 62 |
striated muscle tissue | 7.49e-07 | 62 |
myotome | 7.49e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.13e-16 | 14 |
female reproductive organ cancer | 1.10e-07 | 27 |
reproductive organ cancer | 4.53e-07 | 29 |