FFCP PHASE1:Hg19::chr11:67888836..67888869,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1119 | |EntrezGene=1119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1937 | |HGNC=1937 | ||
|TSSclassifier=strong | |||
|UniProt=P35790 | |UniProt=P35790 | ||
|association_with_transcript=0bp_to_NM_001277,NM_212469,uc001onj.2,uc001onk.2_5end | |association_with_transcript=0bp_to_NM_001277,NM_212469,uc001onj.2,uc001onk.2_5end | ||
|cluster_id=chr11:67888836..67888869,- | |||
|description=CAGE_peak_1_at_CHKA_5end | |description=CAGE_peak_1_at_CHKA_5end | ||
|id=chr11:67888836..67888869,- | |id=chr11:67888836..67888869,- | ||
|ontology_enrichment_celltype=CL:0000763!5.97e-25!112;CL:0000049!5.97e-25!112;CL:0000766!1.01e-20!76;CL:0000557!3.93e-18!71;CL:0000988!1.62e-17!182;CL:0000037!2.06e-17!172;CL:0000566!2.06e-17!172;CL:0002032!3.48e-16!165;CL:0000837!3.48e-16!165;CL:0000839!7.77e-16!70;CL:0002009!2.42e-15!65;CL:0002194!5.97e-15!63;CL:0000576!5.97e-15!63;CL:0000040!5.97e-15!63;CL:0000559!5.97e-15!63;CL:0000860!1.57e-13!45;CL:0000738!2.10e-13!140;CL:0002057!4.56e-12!42;CL:0002031!1.10e-08!124;CL:0002087!2.58e-08!119 | |ontology_enrichment_celltype=CL:0000763!5.97e-25!112;CL:0000049!5.97e-25!112;CL:0000766!1.01e-20!76;CL:0000557!3.93e-18!71;CL:0000988!1.62e-17!182;CL:0000037!2.06e-17!172;CL:0000566!2.06e-17!172;CL:0002032!3.48e-16!165;CL:0000837!3.48e-16!165;CL:0000839!7.77e-16!70;CL:0002009!2.42e-15!65;CL:0002194!5.97e-15!63;CL:0000576!5.97e-15!63;CL:0000040!5.97e-15!63;CL:0000559!5.97e-15!63;CL:0000860!1.57e-13!45;CL:0000738!2.10e-13!140;CL:0002057!4.56e-12!42;CL:0002031!1.10e-08!124;CL:0002087!2.58e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000766;3.98e-09;69!CL:0000576;6.68e-09;48!CL:0000860;5.38e-08;33!CL:0002057;5.38e-08;33!CL:0000473;1.03e-07;39!CL:0000234;1.03e-07;39!CL:0000763;2.12e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.33e-24,108;CL:0000049,2.33e-24,108;CL:0000766,3.13e-20,72;CL:0000557,1.24e-17,67;CL:0000988,6.39e-17,177;CL:0000037,8.51e-17,168;CL:0002032,1.39e-15,161;CL:0000837,1.39e-15,161;CL:0000839,2.55e-15,66;CL:0002009,7.71e-15,61;CL:0002194,1.88e-14,59;CL:0000576,1.88e-14,59;CL:0000040,1.88e-14,59;CL:0000559,1.88e-14,59;CL:0000473,5.29e-13,48;CL:0000234,5.29e-13,48;CL:0000738,7.75e-13,136;CL:0000860,4.56e-12,42;CL:0002057,4.56e-12,42;CL:0002031,3.46e-08,120;CL:0002087,7.98e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.74e-09;42!CL:0000049;3.94e-07;108 | |||
|ontology_enrichment_disease=DOID:305!5.12e-07!106 | |ontology_enrichment_disease=DOID:305!5.12e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.12e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005743!3.56e-17!86;UBERON:0000073!5.22e-17!94;UBERON:0001016!5.22e-17!94;UBERON:0001017!1.31e-15!82;UBERON:0001049!4.82e-15!57;UBERON:0005068!4.82e-15!57;UBERON:0006241!4.82e-15!57;UBERON:0007135!4.82e-15!57;UBERON:0002405!7.53e-15!115;UBERON:0001474!1.21e-14!86;UBERON:0002371!3.42e-14!80;UBERON:0002780!8.15e-13!41;UBERON:0001890!8.15e-13!41;UBERON:0006240!8.15e-13!41;UBERON:0001893!1.10e-12!34;UBERON:0003080!1.20e-12!42;UBERON:0002020!1.87e-12!34;UBERON:0003528!1.87e-12!34;UBERON:0002616!2.78e-12!59;UBERON:0002791!3.50e-12!33;UBERON:0000955!7.39e-12!69;UBERON:0006238!7.39e-12!69;UBERON:0001869!1.60e-11!32;UBERON:0003075!1.53e-10!86;UBERON:0007284!1.53e-10!86;UBERON:0003056!2.26e-10!61;UBERON:0004765!4.55e-10!101;UBERON:0001434!4.55e-10!101;UBERON:0002390!5.83e-10!102;UBERON:0003061!5.83e-10!102;UBERON:0002193!8.24e-10!112;UBERON:0002346!1.02e-09!90;UBERON:0000956!7.23e-09!25;UBERON:0000203!7.23e-09!25;UBERON:0007023!5.50e-08!115;UBERON:0002619!5.62e-08!22;UBERON:0001950!1.52e-07!20;UBERON:0000062!2.06e-07!511 | |ontology_enrichment_uberon=UBERON:0005743!3.56e-17!86;UBERON:0000073!5.22e-17!94;UBERON:0001016!5.22e-17!94;UBERON:0001017!1.31e-15!82;UBERON:0001049!4.82e-15!57;UBERON:0005068!4.82e-15!57;UBERON:0006241!4.82e-15!57;UBERON:0007135!4.82e-15!57;UBERON:0002405!7.53e-15!115;UBERON:0001474!1.21e-14!86;UBERON:0002371!3.42e-14!80;UBERON:0002780!8.15e-13!41;UBERON:0001890!8.15e-13!41;UBERON:0006240!8.15e-13!41;UBERON:0001893!1.10e-12!34;UBERON:0003080!1.20e-12!42;UBERON:0002020!1.87e-12!34;UBERON:0003528!1.87e-12!34;UBERON:0002616!2.78e-12!59;UBERON:0002791!3.50e-12!33;UBERON:0000955!7.39e-12!69;UBERON:0006238!7.39e-12!69;UBERON:0001869!1.60e-11!32;UBERON:0003075!1.53e-10!86;UBERON:0007284!1.53e-10!86;UBERON:0003056!2.26e-10!61;UBERON:0004765!4.55e-10!101;UBERON:0001434!4.55e-10!101;UBERON:0002390!5.83e-10!102;UBERON:0003061!5.83e-10!102;UBERON:0002193!8.24e-10!112;UBERON:0002346!1.02e-09!90;UBERON:0000956!7.23e-09!25;UBERON:0000203!7.23e-09!25;UBERON:0007023!5.50e-08!115;UBERON:0002619!5.62e-08!22;UBERON:0001950!1.52e-07!20;UBERON:0000062!2.06e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.52e-11;34!UBERON:0003528;1.07e-10;34!UBERON:0002020;1.07e-10;34!UBERON:0002791;1.98e-10;32!UBERON:0001869;2.26e-10;32!UBERON:0002780;1.78e-09;41!UBERON:0001890;1.78e-09;41!UBERON:0000956;8.51e-09;25!UBERON:0000203;8.51e-09;25!UBERON:0000073;1.11e-08;53!UBERON:0002616;1.11e-08;53!UBERON:0002619;6.43e-08;22!UBERON:0001950;1.72e-07;20 | |||
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| ||
|short_description=p1@CHKA | |short_description=p1@CHKA | ||
}} | }} |
Latest revision as of 19:51, 19 September 2015
Short description: | p1@CHKA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHKA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001277, NM_212469, uc001onj.2, uc001onk.2_5end |
EntrezGene: | CHKA |
HGNC: | 1937 |
UniProt: | P35790 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.33e-24 | 108 |
common myeloid progenitor | 2.33e-24 | 108 |
myeloid leukocyte | 3.13e-20 | 72 |
granulocyte monocyte progenitor cell | 1.24e-17 | 67 |
hematopoietic cell | 6.39e-17 | 177 |
hematopoietic stem cell | 8.51e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.39e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-15 | 161 |
myeloid lineage restricted progenitor cell | 2.55e-15 | 66 |
macrophage dendritic cell progenitor | 7.71e-15 | 61 |
monopoietic cell | 1.88e-14 | 59 |
monocyte | 1.88e-14 | 59 |
monoblast | 1.88e-14 | 59 |
promonocyte | 1.88e-14 | 59 |
defensive cell | 5.29e-13 | 48 |
phagocyte | 5.29e-13 | 48 |
leukocyte | 7.75e-13 | 136 |
classical monocyte | 4.56e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.56e-12 | 42 |
hematopoietic lineage restricted progenitor cell | 3.46e-08 | 120 |
nongranular leukocyte | 7.98e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.12e-07 | 106 |