FFCP PHASE1:Hg19::chr1:92351748..92351761,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7049 | |EntrezGene=7049 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11774 | |HGNC=11774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_ENST00000212355,uc001doh.2,uc001doi.2,uc010osy.1_5end | |association_with_transcript=25bp_to_ENST00000212355,uc001doh.2,uc001doi.2,uc010osy.1_5end | ||
|cluster_id=chr1:92351748..92351761,- | |||
|description=CAGE_peak_3_at_TGFBR3_5end | |description=CAGE_peak_3_at_TGFBR3_5end | ||
|id=chr1:92351748..92351761,- | |id=chr1:92351748..92351761,- | ||
|ontology_enrichment_celltype=CL:0000791!1.22e-10!18;CL:0000789!1.22e-10!18;CL:0002420!1.22e-10!18;CL:0002419!1.22e-10!18;CL:0000790!1.22e-10!18;CL:0000625!7.18e-08!11;CL:0000084!5.47e-07!25;CL:0000827!5.47e-07!25 | |ontology_enrichment_celltype=CL:0000791!1.22e-10!18;CL:0000789!1.22e-10!18;CL:0002420!1.22e-10!18;CL:0002419!1.22e-10!18;CL:0000790!1.22e-10!18;CL:0000625!7.18e-08!11;CL:0000084!5.47e-07!25;CL:0000827!5.47e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.51e-14;18!CL:0000789;1.51e-14;18!CL:0002419;1.51e-14;18!CL:0000625;5.18e-12;11!CL:0000084;9.68e-12;25 | |ontology_enrichment_celltype_v019=CL:0000791;1.51e-14;18!CL:0000789;1.51e-14;18!CL:0002419;1.51e-14;18!CL:0000625;5.18e-12;11!CL:0000084;9.68e-12;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.15e-15,18;CL:0000789,5.15e-15,18;CL:0002420,5.15e-15,18;CL:0002419,5.15e-15,18;CL:0000790,5.15e-15,18;CL:0000084,2.49e-12,25;CL:0000827,2.49e-12,25;CL:0000625,2.49e-12,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.51e-14;18 | |ontology_enrichment_development_v019=CL:0000790;1.51e-14;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.08e-12!115 | |ontology_enrichment_uberon=UBERON:0007023!6.08e-12!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;3.36e-07;6!UBERON:0003293;3.36e-07;6!UBERON:0003294;3.36e-07;6!UBERON:0010047;3.36e-07;6!UBERON:0003408;3.36e-07;6!UBERON:0000167;3.36e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001044;3.36e-07;6!UBERON:0003293;3.36e-07;6!UBERON:0003294;3.36e-07;6!UBERON:0010047;3.36e-07;6!UBERON:0003408;3.36e-07;6!UBERON:0000167;3.36e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.19e-10,114;UBERON:0001044,3.32e-07,6;UBERON:0003293,3.32e-07,6;UBERON:0003294,3.32e-07,6;UBERON:0010047,3.32e-07,6;UBERON:0000167,3.32e-07,6 | |||
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|phase1_expression=0.363356758541113,1.07050261945492,0.140954404095971,2.00146596706261,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0,0,0.436882744260345,0.527533956456907,0.37129905888014,1.32558950291166,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0.458480434487708,0.410502947249729,0.629686250509434,0.393364276848904,4.60595277716655,0.928896739896456,0,0,0,0,0,0,0,1.40381113229099,1.08505435357926,0.447830948479849,0.647787332037959,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,3.540775862049,2.75107533924415,3.90642848099067,0.334372990781356,0.977766799900771,1.89379122293893,0,2.1167986808183,1.47302953737419,1.55073726208535,1.62482318259009,2.0494611156108,1.04047478047903,0.657751618414705,1.38175008892924,0.579606171470105,0.444859689486181,0,1.04535523804977,2.37949619664889,1.53288197440768,2.74901956386104,2.78321661221453,4.77848121486145,0.651083453856419,1.90090408889675,1.80690142893327,3.07167866770604,7.49584359314075,3.55165878066025,3.28451198768419,7.25784275609037,8.02320587350522,4.05508330871837,0,0,0.383587685530591,0,0,0.434539556882471,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,1.24430121722827,0,0,0.324547393654683,0,0,0,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0.838998872419812,0.825354125820202,0.417989933073621,0.516833518338658,1.77883131343355,1.33888245105868,0.402829317109147,0,0.24406205754817,0.735326160691737,0.81014194788176,1.16089646769304,1.57170560838319,1.57656072676651,0,0,0.549605231791222,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.860509862246441,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0.538842688278752,0.817309515567294,1.21085942115945,0.576175924479999,0,0.624320153660641,0,1.19558944441441,0.117434498643765,0.647491777472526,0.702254033511242,1.02077085627447,0.245668634623536,0.826606249406124,0,0.741800787835671,0,0,1.0100166837244,0.625592599359821,1.38532057742091,0,0.612975591598039,1.65261864797256,0.226864366320042,0.89694817844431,1.92201649936711,0.423863802319124,0.600182192168805,0.618315175430633,0.257640540045629,0.18611685633159,1.0126579934476,0.292311015483596,0.504867548488229,0.460249493211497,0.646584227275248,0,0.302256294682921,0.339121184620975,0.193260853163297,0,0,0,0.132529768321485,0.348581828608555,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0.98110732562673,0.38474715694639,0,0,0,0,0,0.982827216677626,2.95394953340702,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0.977424915930974,1.03993478527958,0,0,0,0.433099343283221,0,1.52203321787679,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0.63497894292169,1.14596527667483,0,0,0.822619941626588,0.300343057843917,1.42913216315289,0.336393253036082,0,0.07333828582095,0.258543431515556,3.57656445851882,2.535908257668,0.26593811658487,0,0.514414748524284,1.41849132023278,0.266422179016099,0.428933980974443,1.08524321078289,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0.560425719967636,6.69904584686553,6.03757209606648,6.93052395910641,0,0,0,0,0,0,0,0.414415513436035,0.736148950314839,0.500170521059677,0.542530047399471,0.207970861530807,0.535286966391485,0,0.702848489956279,0.300946099727719,0,1.03473071292505,0,0.737476674166813,1.39013783148933,0.979005787313703,1.02943027143257,1.86091223510599,1.07857100409308,5.76328812138599,0.303127571446259,0,1.20956117331872,0,0.153461973288062,0.561320188866147,0,0,0.160853921143607,1.48418066444991,0.925258162815933,0.355123450626254,0.98552587216571,0,0.581051892299796,0.241718899183244,0,0,0.34444334449382,0.728364672026868,0.786746489756545,0,0.0770153371044148,0,0,0.105551628892876,0,0.680374821106063,0.647747748306418,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0,0,2.67906630284078,0.54941678891006,0.742585499285292,0,0,0,0.193341436584244,0.616194468458578,0.614014698904518,0.137836572484531,0.537101224341368,0.580066775656914,0.596586391912706,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,1.25924938732256,0,0,0,0,0.55597265731176,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0.95460974377781,0.78494864019923,0.179872457583315,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0,0.974853958525138,0,0.9554993798559,0.424216295861138,0,0,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0,1.00387946542836,0,0,0,0.844430541190656,2.30506425071931,1.51789269506286,0,0,0,0,3.29503302718727,0,0,0.443430153536676,0.229723400206959,1.52234282769651,0.764637207142375,1.70894156152249,0.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| ||
|short_description=p3@TGFBR3 | |short_description=p3@TGFBR3 | ||
}} | }} |
Latest revision as of 19:45, 19 September 2015
Short description: | p3@TGFBR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGFBR3_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000212355, uc001doh.2, uc001doi.2, uc010osy.1_5end |
EntrezGene: | TGFBR3 |
HGNC: | 11774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.15e-15 | 18 |
alpha-beta T cell | 5.15e-15 | 18 |
immature T cell | 5.15e-15 | 18 |
mature T cell | 5.15e-15 | 18 |
immature alpha-beta T cell | 5.15e-15 | 18 |
T cell | 2.49e-12 | 25 |
pro-T cell | 2.49e-12 | 25 |
CD8-positive, alpha-beta T cell | 2.49e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.19e-10 | 114 |
saliva-secreting gland | 3.32e-07 | 6 |
gland of oral region | 3.32e-07 | 6 |
gland of foregut | 3.32e-07 | 6 |
oral gland | 3.32e-07 | 6 |
oral cavity | 3.32e-07 | 6 |