FFCP PHASE1:Hg19::chr15:90931547..90931558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8826 | |EntrezGene=8826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6110 | |HGNC=6110 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENST00000559809_5end | |association_with_transcript=-28bp_to_ENST00000559809_5end | ||
|cluster_id=chr15:90931547..90931558,+ | |||
|description=CAGE_peak_2_at_IQGAP1_5end | |description=CAGE_peak_2_at_IQGAP1_5end | ||
|id=chr15:90931547..90931558,+ | |id=chr15:90931547..90931558,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.00e-22!76;CL:0000557!1.80e-20!71;CL:0002009!2.46e-19!65;CL:0002194!2.12e-18!63;CL:0000576!2.12e-18!63;CL:0000040!2.12e-18!63;CL:0000559!2.12e-18!63;CL:0000839!2.32e-18!70;CL:0002057!6.43e-16!42;CL:0000860!2.54e-15!45;CL:0000763!1.64e-11!112;CL:0000049!1.64e-11!112;CL:0000738!1.87e-11!140;CL:0002031!6.18e-08!124;CL:0000134!3.57e-07!358;CL:0002087!4.62e-07!119 | |ontology_enrichment_celltype=CL:0000766!2.00e-22!76;CL:0000557!1.80e-20!71;CL:0002009!2.46e-19!65;CL:0002194!2.12e-18!63;CL:0000576!2.12e-18!63;CL:0000040!2.12e-18!63;CL:0000559!2.12e-18!63;CL:0000839!2.32e-18!70;CL:0002057!6.43e-16!42;CL:0000860!2.54e-15!45;CL:0000763!1.64e-11!112;CL:0000049!1.64e-11!112;CL:0000738!1.87e-11!140;CL:0002031!6.18e-08!124;CL:0000134!3.57e-07!358;CL:0002087!4.62e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.40e-15;33!CL:0002057;3.40e-15;33!CL:0000473;1.81e-14;39!CL:0000234;1.81e-14;39!CL:0000576;8.27e-11;48!CL:0000766;5.78e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.55e-23,72;CL:0000557,4.31e-21,67;CL:0002009,5.49e-20,61;CL:0002194,4.94e-19,59;CL:0000576,4.94e-19,59;CL:0000040,4.94e-19,59;CL:0000559,4.94e-19,59;CL:0000839,6.40e-19,66;CL:0000473,2.83e-18,48;CL:0000234,2.83e-18,48;CL:0000860,5.73e-16,42;CL:0002057,5.73e-16,42;CL:0000763,1.32e-11,108;CL:0000049,1.32e-11,108;CL:0000738,2.28e-11,136;CL:0002031,7.65e-08,120;CL:0000134,2.64e-07,354;CL:0002087,5.89e-07,115;CL:0002320,8.32e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.82e-18!102;UBERON:0003061!3.82e-18!102;UBERON:0002371!1.09e-17!80;UBERON:0002193!1.15e-17!112;UBERON:0001474!1.53e-15!86;UBERON:0004765!3.93e-15!101;UBERON:0001434!3.93e-15!101;UBERON:0003081!9.69e-15!216;UBERON:0002204!3.16e-11!167;UBERON:0000926!1.77e-09!448;UBERON:0004120!1.77e-09!448;UBERON:0006603!1.77e-09!448;UBERON:0002405!2.43e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.87e-18,98;UBERON:0003061,1.87e-18,98;UBERON:0002371,3.24e-18,76;UBERON:0002193,8.28e-18,108;UBERON:0003081,4.82e-17,203;UBERON:0002405,5.30e-17,93;UBERON:0004765,5.72e-16,90;UBERON:0001474,7.15e-16,82;UBERON:0001434,1.06e-14,100;UBERON:0000926,2.73e-14,315;UBERON:0004120,2.73e-14,315;UBERON:0006603,2.73e-14,315;UBERON:0002204,5.62e-11,167;UBERON:0002384,8.33e-07,371 | |||
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| ||
|short_description=p2@IQGAP1 | |short_description=p2@IQGAP1 | ||
}} | }} |
Latest revision as of 19:40, 19 September 2015
Short description: | p2@IQGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IQGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000559809_5end |
EntrezGene: | IQGAP1 |
HGNC: | 6110 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.55e-23 | 72 |
granulocyte monocyte progenitor cell | 4.31e-21 | 67 |
macrophage dendritic cell progenitor | 5.49e-20 | 61 |
monopoietic cell | 4.94e-19 | 59 |
monocyte | 4.94e-19 | 59 |
monoblast | 4.94e-19 | 59 |
promonocyte | 4.94e-19 | 59 |
myeloid lineage restricted progenitor cell | 6.40e-19 | 66 |
defensive cell | 2.83e-18 | 48 |
phagocyte | 2.83e-18 | 48 |
classical monocyte | 5.73e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.73e-16 | 42 |
myeloid cell | 1.32e-11 | 108 |
common myeloid progenitor | 1.32e-11 | 108 |
leukocyte | 2.28e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.65e-08 | 120 |
mesenchymal cell | 2.64e-07 | 354 |
nongranular leukocyte | 5.89e-07 | 115 |
connective tissue cell | 8.32e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.87e-18 | 98 |
blood island | 1.87e-18 | 98 |
bone marrow | 3.24e-18 | 76 |
hemolymphoid system | 8.28e-18 | 108 |
lateral plate mesoderm | 4.82e-17 | 203 |
immune system | 5.30e-17 | 93 |
skeletal element | 5.72e-16 | 90 |
bone element | 7.15e-16 | 82 |
skeletal system | 1.06e-14 | 100 |
mesoderm | 2.73e-14 | 315 |
mesoderm-derived structure | 2.73e-14 | 315 |
presumptive mesoderm | 2.73e-14 | 315 |
musculoskeletal system | 5.62e-11 | 167 |
connective tissue | 8.33e-07 | 371 |