FFCP PHASE1:Hg19::chr15:90818696..90818716,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=A6NN79 | |UniProt=A6NN79 | ||
|association_with_transcript=430bp_to_AK098314_5end | |association_with_transcript=430bp_to_AK098314_5end | ||
|cluster_id=chr15:90818696..90818716,+ | |||
|coexpression_cluster_id=C1043 | |coexpression_cluster_id=C1043 | ||
|description=CAGE_peak_1_at_AK098314_5end | |description=CAGE_peak_1_at_AK098314_5end | ||
|id=chr15:90818696..90818716,+ | |id=chr15:90818696..90818716,+ | ||
|ontology_enrichment_celltype=CL:0002159;2.60e-15;14!CL:0002076;1.05e-13;42!CL:0002251;9.92e-10;20!CL:0002077;6.28e-09;34!CL:0002621;2.97e-08;3!CL:0002166;3.69e-08;3!CL:0000622;7.22e-08;5!CL:0002541;1.63e-07;3!CL:0002368;1.89e-07;13!CL:0002328;5.11e-07;3 | |ontology_enrichment_celltype=CL:0000066!1.05e-21!254;CL:0002076!6.61e-15!43;CL:0000223!5.79e-13!59;CL:0000220!7.96e-11!246;CL:0002321!8.29e-11!248;CL:0002077!2.55e-08!33;CL:0002251!2.67e-08!21;CL:0002159!8.12e-08!13 | ||
| | |ontology_enrichment_celltype_v019=CL:0002159;2.60e-15;14!CL:0002076;1.05e-13;42!CL:0002251;9.92e-10;20!CL:0002077;6.28e-09;34!CL:0002621;2.97e-08;3!CL:0002166;3.69e-08;3!CL:0000622;7.22e-08;5!CL:0002541;1.63e-07;3!CL:0002368;1.89e-07;13!CL:0002328;5.11e-07;3 | ||
|ontology_enrichment_disease=DOID:0060084;2.90e-08;3!DOID:127;2.90e-08;3 | |ontology_enrichment_celltype_v019_2=CL:0002076,9.09e-19,42;CL:0002159,3.22e-15,14;CL:0000223,2.33e-13,58;CL:0000066,2.18e-11,253;CL:0002077,4.27e-10,34;CL:0002251,8.54e-10,20;CL:0002621,3.08e-08,3;CL:0002166,3.23e-08,3;CL:0000622,6.49e-08,5;CL:0002368,1.61e-07,13;CL:0002328,1.65e-07,3;CL:0002541,1.72e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0005631;2.83e-08;10!UBERON:0000158;2.83e-08;10!UBERON:0001949;2.97e-08;3!UBERON:0003124;1.63e-07;3!UBERON:0000920;1.63e-07;3!UBERON:0000486;4.68e-07;12!UBERON:0004815;5.11e-07;3!UBERON:0002031;5.11e-07;3!UBERON:0000165;9.20e-07;28 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.74e-08!106;DOID:0050687!4.66e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.90e-08;3!DOID:127;2.90e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.48e-08,3;DOID:127,2.48e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.77e-13!169;UBERON:0000925!7.77e-13!169;UBERON:0006595!7.77e-13!169;UBERON:0001004!1.16e-10!72;UBERON:0001007!3.32e-10!155;UBERON:0001555!3.32e-10!155;UBERON:0007026!3.32e-10!155;UBERON:0004921!1.18e-08!129;UBERON:0004185!1.18e-08!129;UBERON:0000161!1.30e-08!35;UBERON:0005156!3.66e-08!59;UBERON:0000990!3.66e-08!59;UBERON:0000166!1.12e-07!21;UBERON:0003100!5.96e-07!41;UBERON:0000077!7.88e-07!130;UBERON:0000065!8.80e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.83e-08;10!UBERON:0000158;2.83e-08;10!UBERON:0001949;2.97e-08;3!UBERON:0003124;1.63e-07;3!UBERON:0000920;1.63e-07;3!UBERON:0000486;4.68e-07;12!UBERON:0004815;5.11e-07;3!UBERON:0002031;5.11e-07;3!UBERON:0000165;9.20e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.48e-09,74;UBERON:0003102,1.17e-08,99;UBERON:0001949,3.08e-08,3;UBERON:0004119,3.75e-08,160;UBERON:0000925,3.75e-08,160;UBERON:0006595,3.75e-08,160;UBERON:0000166,1.36e-07,22;UBERON:0004815,1.65e-07,3;UBERON:0002031,1.65e-07,3;UBERON:0000920,1.72e-07,3;UBERON:0000161,2.77e-07,36;UBERON:0000033,3.36e-07,56;UBERON:0000153,3.90e-07,62;UBERON:0007811,3.90e-07,62 | |||
|phase1_expression=0.181678379270557,1.92690471501885,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,0.697801167972428,0.436882744260345,0.527533956456907,0.37129905888014,0.331397375727916,1.34465029290355,1.20538905604795,1.46062018077475,0.487932798790507,0,0.408001382488506,0,0,0,0.125542639594803,0,0.0821005894499457,0,0,0,0,1.83884244895785,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0.221533894583621,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0.724232594804119,0,0.973269740605272,0,0.443458794925128,0.175669571386252,0.0654895377488563,1.45718115317017,4.07862887062872,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0,0,0.825354125820202,0.626984899610432,0.258416759169329,0.71153252537342,0,0.805658634218294,0.760272105718513,0.732186172644509,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0,0,0.302714855289863,0,0,0.624320153660641,0,0.747243402759005,0,0.161872944368132,0,0.204154171254893,0.368502951935304,0.103325781175765,0,0.494533858557114,0.910161361938026,1.43723628363248,0,0,0,0,0,0.150238058906597,0,0,0,0,0.900273288253207,0.103052529238439,0,0,0.843881661206331,0.194874010322397,0.252433774244115,0.184099797284599,0.646584227275248,0,0.10075209822764,0.339121184620975,3.09217365061275,3.81844568827169,3.15485054927904,0.487894824518382,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0.928735856063958,0.721879481669586,1.41968160047813,0.505754070234305,0.723033089650446,0.661763836394364,0.871517776369625,0.71181185733329,0.808987848960987,1.37355025587742,1.53898862778556,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,4.39001141634502,1.1240175325762,2.91534019993729,1.75918045801206,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0.858486162094873,0,0,0,3.74935335947108,3.35964256397719,2.97727704209012,0.447792613514241,1.16253575405585,0.383382679165211,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.411309970813294,0,0.571652865261156,0.224262168690721,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,1.58390374586686,0.301439377059586,0,1.29964888536674,0,0,0,0.239624855491583,0,0,0.579125226670317,0.61642896765115,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0.542530047399471,0.415941723061614,2.3195768543631,0.157702415033935,0.702848489956279,0,2.27407504055985,1.03473071292505,0,0,0.521301686808497,0,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,0,0.153461973288062,1.68396056659844,0.512556597022804,0,0.482561763430822,0,0.154209693802656,0,0.164254312027618,1.03850885836724,0.464841513839837,0.846016147141356,13.4339335103201,5.52485933615378,0.34444334449382,0.546273504020151,1.31124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0.680374821106063,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0,0.824328093181778,0,0,1.14853107599234,6.50060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0.290033387828457,0.255679882248303,0.178064071293475,2.80984356113663,1.15314040419064,0.255225424989168,0.910420027699949,0.464845549297286,2.20368642781448,0,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0.372158369359667,0.949138274156178,0.762520775695299,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0.709522128141196,0.844430541190656,0,0,0,0.577332676353072,2.01090682660736,1.08890984861323,0.470719003883896,2.15252686335615,6.73885902670502,6.65145230305014,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,4.05865624054073,4.15750553165694,9.82914246717543,0.994147647766298,0,0,0.659215496907038,0,0.796991953004279,0,0.251932747854276,0,0,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,1.93448862085349,0.254253650292766,0.945550727071745,0.689486746482929,0,0,0,0,0,0,0,0.219385397153973,0.32681539055697,1.25481369850743,1.38510465306835,0.341826167541004,0.23056390438806,1.25660702173681,0.217294743844016,1.5950057986596,1.09917112082235,5.33034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.424059214301822,0.216388639742091,0,0.353830258013357,0.611030144933625,0.593042257361244,0,0.104421949505455,0,0,0,0,0.391329237864179,0.485560759068186,0.394584402849391,0,0,0,0.150323419414493,0.518440956986236,0,0.661983911750998,0,0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| ||
|short_description=p1@AK098314 | |short_description=p1@AK098314 | ||
}} | }} |
Latest revision as of 19:38, 19 September 2015
Short description: | p1@AK098314 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK098314_5end |
Coexpression cluster: | C1043_keratoacanthoma_Prostate_tongue_amniotic_salivary_skin_esophagus |
Association with transcript: | 430bp_to_AK098314_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.09e-19 | 42 |
general ecto-epithelial cell | 3.22e-15 | 14 |
endodermal cell | 2.33e-13 | 58 |
epithelial cell | 2.18e-11 | 253 |
ecto-epithelial cell | 4.27e-10 | 34 |
epithelial cell of alimentary canal | 8.54e-10 | 20 |
gingival epithelial cell | 3.08e-08 | 3 |
epithelial cell of Malassez | 3.23e-08 | 3 |
acinar cell | 6.49e-08 | 5 |
respiratory epithelial cell | 1.61e-07 | 13 |
bronchial epithelial cell | 1.65e-07 | 3 |
chorionic membrane mesenchymal stem cell | 1.72e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.48e-09 | 74 |
surface structure | 1.17e-08 | 99 |
gingival epithelium | 3.08e-08 | 3 |
endoderm-derived structure | 3.75e-08 | 160 |
endoderm | 3.75e-08 | 160 |
presumptive endoderm | 3.75e-08 | 160 |
oral opening | 1.36e-07 | 22 |
lower respiratory tract epithelium | 1.65e-07 | 3 |
epithelium of bronchus | 1.65e-07 | 3 |
egg chorion | 1.72e-07 | 3 |
orifice | 2.77e-07 | 36 |
head | 3.36e-07 | 56 |
anterior region of body | 3.90e-07 | 62 |
craniocervical region | 3.90e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.48e-08 | 3 |
leiomyoma | 2.48e-08 | 3 |