FFCP PHASE1:Hg19::chr10:90305239..90305251,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55328 | |EntrezGene=55328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25641 | |HGNC=25641 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_uc009xtj.2_5end | |association_with_transcript=27bp_to_uc009xtj.2_5end | ||
|cluster_id=chr10:90305239..90305251,- | |||
|coexpression_cluster_id=C158 | |coexpression_cluster_id=C158 | ||
|description=CAGE_peak_10_at_RNLS_5end | |description=CAGE_peak_10_at_RNLS_5end | ||
|id=chr10:90305239..90305251,- | |id=chr10:90305239..90305251,- | ||
|ontology_enrichment_celltype=CL:0002566!2.80e-07!1 | |ontology_enrichment_celltype=CL:0002566!2.80e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000746;1.71e-14;3!CL:0000737;3.26e-11;4!CL:0002149;7.25e-08;6!CL:0002255;7.25e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.83e-14,3;CL:0000513,1.83e-14,3;CL:0000737,3.42e-11,4;CL:0002149,7.25e-08,6;CL:0002255,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000513;1.71e-14;3 | |||
|ontology_enrichment_disease=DOID:1909!3.99e-14!2 | |ontology_enrichment_disease=DOID:1909!3.99e-14!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.81e-21;2!DOID:3001;7.25e-08;6!DOID:299;2.35e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.81e-21,2;DOID:3001,7.25e-08,6;DOID:299,2.35e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0006834!1.69e-07!1;UBERON:0002363!2.98e-07!1;UBERON:0007647!2.98e-07!1;UBERON:0010115!2.98e-07!1 | |ontology_enrichment_uberon=UBERON:0006834!1.69e-07!1;UBERON:0002363!2.98e-07!1;UBERON:0007647!2.98e-07!1;UBERON:0010115!2.98e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.22e-14;3!UBERON:0001235;1.22e-14;3!UBERON:0006858;1.22e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.22e-14,3;UBERON:0001235,1.22e-14,3;UBERON:0006858,1.22e-14,3 | |||
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|short_description=p10@RNLS | |short_description=p10@RNLS | ||
}} | }} |
Latest revision as of 19:36, 19 September 2015
Short description: | p10@RNLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RNLS_5end |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | 27bp_to_uc009xtj.2_5end |
EntrezGene: | RNLS |
HGNC: | 25641 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.83e-14 | 3 |
cardiac muscle myoblast | 1.83e-14 | 3 |
striated muscle cell | 3.42e-11 | 4 |
epithelial cell of uterus | 7.25e-08 | 6 |
stromal cell of endometrium | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.22e-14 | 3 |
adrenal cortex | 1.22e-14 | 3 |
adrenal/interrenal gland | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.81e-21 | 2 |
female reproductive endometrioid cancer | 7.25e-08 | 6 |
adenocarcinoma | 2.35e-07 | 25 |