FFCP PHASE1:Hg19::chr3:119012895..119012908,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:119012895..119012908,+
|short_description=p6@ARHGAP31
|description=CAGE_peak_6_at_ARHGAP31_5end
|association_with_transcript=-311bp_to_ENST00000264245,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57514 | |EntrezGene=57514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29216 | |HGNC=29216 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M1Z3 | |UniProt=Q2M1Z3 | ||
|association_with_transcript=-311bp_to_ENST00000264245,NM_020754,uc003ecj.3_5end | |||
|cluster_id=chr3:119012895..119012908,+ | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_6_at_ARHGAP31_5end | |||
|id=chr3:119012895..119012908,+ | |||
|ontology_enrichment_celltype=CL:0000192!6.10e-15!42;CL:0000514!6.10e-15!42;CL:0000359!2.47e-14!32;CL:0000187!2.26e-13!54;CL:0000680!2.97e-13!57;CL:0000056!2.97e-13!57;CL:0000355!2.97e-13!57;CL:0000183!1.57e-12!59;CL:0000393!3.20e-11!60;CL:0000211!3.20e-11!60;CL:0000723!2.01e-09!436;CL:0000048!2.34e-09!430;CL:0000034!7.26e-09!444;CL:0000055!1.15e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.69e-24;32!CL:0000192;1.21e-15;43!CL:0002494;2.51e-13;16!CL:0002539;5.91e-11;10!CL:0000187;1.14e-09;55!CL:0002595;3.08e-09;5!CL:0002592;1.54e-08;3!CL:0000393;4.70e-08;61!CL:0000211;4.70e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.33e-26,32;CL:0000192,7.03e-22,43;CL:0000514,7.03e-22,43;CL:0000187,3.94e-19,55;CL:0000680,8.48e-18,58;CL:0000056,8.48e-18,58;CL:0000355,8.48e-18,58;CL:0000393,1.34e-16,61;CL:0000211,1.34e-16,61;CL:0002494,1.29e-13,16;CL:0002539,6.35e-11,10;CL:0002595,3.07e-09,5;CL:0002592,9.68e-09,3;CL:0000222,2.69e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.21e-15;43!CL:0000355;7.54e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!2.25e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.52e-13;14!DOID:120;4.36e-09;27!DOID:193;2.73e-08;29!DOID:0060084;4.05e-08;3!DOID:127;4.05e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.78e-13,14;DOID:120,3.15e-09,27;DOID:193,2.02e-08,29;DOID:0060084,5.14e-08,3;DOID:127,5.14e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001009!1.80e-15!113;UBERON:0004535!9.56e-14!110;UBERON:0004872!1.21e-13!84;UBERON:0001637!2.05e-13!42;UBERON:0003509!2.05e-13!42;UBERON:0004572!2.05e-13!42;UBERON:0001134!2.49e-12!61;UBERON:0002036!2.49e-12!61;UBERON:0003082!2.49e-12!61;UBERON:0002385!3.72e-12!63;UBERON:0001015!3.72e-12!63;UBERON:0000383!3.72e-12!63;UBERON:0004573!5.53e-12!33;UBERON:0004571!5.53e-12!33;UBERON:0004290!5.58e-12!70;UBERON:0001981!9.16e-12!60;UBERON:0007500!9.16e-12!60;UBERON:0004537!9.16e-12!60;UBERON:0006965!9.16e-12!60;UBERON:0003914!1.46e-11!118;UBERON:0002049!1.85e-11!79;UBERON:0007798!1.85e-11!79;UBERON:0000914!8.45e-11!83;UBERON:0002329!8.45e-11!83;UBERON:0003077!8.45e-11!83;UBERON:0003059!8.45e-11!83;UBERON:0007282!8.45e-11!83;UBERON:0009618!8.45e-11!83;UBERON:0007285!8.45e-11!83;UBERON:0000055!1.12e-10!69;UBERON:0007100!1.65e-10!27;UBERON:0000486!1.44e-08!82;UBERON:0000948!2.89e-08!24;UBERON:0005498!2.89e-08!24;UBERON:0004140!2.89e-08!24;UBERON:0009881!2.89e-08!24;UBERON:0004141!2.89e-08!24;UBERON:0003084!2.89e-08!24;UBERON:0007005!2.89e-08!24;UBERON:0004139!2.89e-08!24;UBERON:0004291!2.89e-08!24;UBERON:0003081!5.54e-08!216;UBERON:0005256!1.77e-07!143;UBERON:0001135!3.53e-07!15;UBERON:0002204!6.52e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.62e-28;25!UBERON:0000948;9.41e-22;22!UBERON:0004573;3.21e-20;33!UBERON:0004571;3.21e-20;33!UBERON:0001637;2.50e-17;42!UBERON:0003509;2.50e-17;42!UBERON:0004572;2.50e-17;42!UBERON:0007500;5.52e-12;56!UBERON:0001981;5.52e-12;56!UBERON:0004537;5.52e-12;56!UBERON:0002119;1.95e-11;4!UBERON:0004237;5.91e-11;10!UBERON:0004695;5.91e-11;10!UBERON:0002111;5.91e-11;10!UBERON:0004178;5.91e-11;10!UBERON:0000055;7.82e-10;65!UBERON:0003513;1.19e-09;7!UBERON:0003834;3.08e-09;5!UBERON:0001533;3.08e-09;5!UBERON:0000992;3.67e-09;13!UBERON:0001135;6.31e-09;15!UBERON:0002049;1.01e-08;75!UBERON:0007798;1.01e-08;75!UBERON:0003498;1.54e-08;3!UBERON:0005985;1.54e-08;3!UBERON:0001621;1.54e-08;3!UBERON:0001009;3.38e-08;112!UBERON:0003914;3.75e-08;74!UBERON:0000947;1.15e-07;21!UBERON:0010191;1.15e-07;21!UBERON:0004535;6.86e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.90e-34,83;UBERON:0001009,3.67e-29,112;UBERON:0007100,1.01e-28,27;UBERON:0004535,4.98e-25,109;UBERON:0007500,9.54e-25,59;UBERON:0001981,9.54e-25,59;UBERON:0004537,9.54e-25,59;UBERON:0006965,9.54e-25,59;UBERON:0001637,1.04e-24,42;UBERON:0003509,1.04e-24,42;UBERON:0004572,1.04e-24,42;UBERON:0003914,7.52e-24,117;UBERON:0004573,1.18e-22,33;UBERON:0004571,1.18e-22,33;UBERON:0000948,2.22e-22,24;UBERON:0005498,2.22e-22,24;UBERON:0004140,2.22e-22,24;UBERON:0009881,2.22e-22,24;UBERON:0004141,2.22e-22,24;UBERON:0003084,2.22e-22,24;UBERON:0007005,2.22e-22,24;UBERON:0004139,2.22e-22,24;UBERON:0004291,2.22e-22,24;UBERON:0000055,2.83e-22,68;UBERON:0002049,7.60e-20,78;UBERON:0007798,7.60e-20,78;UBERON:0001134,3.17e-16,62;UBERON:0002036,3.17e-16,62;UBERON:0003082,3.17e-16,62;UBERON:0002329,4.33e-16,71;UBERON:0003059,4.33e-16,71;UBERON:0007282,4.33e-16,71;UBERON:0004290,4.33e-16,71;UBERON:0009618,4.33e-16,71;UBERON:0003077,9.07e-16,72;UBERON:0007285,9.07e-16,72;UBERON:0002385,1.63e-15,64;UBERON:0001015,1.63e-15,64;UBERON:0000383,1.63e-15,64;UBERON:0007524,1.86e-15,73;UBERON:0007503,5.08e-14,78;UBERON:0000926,4.55e-13,315;UBERON:0004120,4.55e-13,315;UBERON:0006603,4.55e-13,315;UBERON:0000486,9.16e-13,83;UBERON:0002119,1.62e-11,4;UBERON:0000025,4.86e-11,192;UBERON:0004237,6.35e-11,10;UBERON:0004695,6.35e-11,10;UBERON:0002111,6.35e-11,10;UBERON:0004178,6.35e-11,10;UBERON:0003081,8.47e-11,203;UBERON:0003103,1.25e-10,68;UBERON:0000490,1.76e-10,148;UBERON:0003513,1.10e-09,7;UBERON:0000992,2.81e-09,13;UBERON:0003834,3.07e-09,5;UBERON:0001533,3.07e-09,5;UBERON:0001135,7.69e-09,15;UBERON:0001621,9.68e-09,3;UBERON:0004111,1.12e-08,240;UBERON:0003498,2.57e-08,5;UBERON:0005985,2.57e-08,5;UBERON:0005256,4.05e-08,122;UBERON:0003104,1.02e-07,160;UBERON:0009142,1.02e-07,160;UBERON:0000947,1.38e-07,21;UBERON:0010191,1.38e-07,21;UBERON:0003134,2.07e-07,37;UBERON:0000474,2.07e-07,37 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,2.53299878168311,0.631719873426831,0.261185628199839,1.47440361900905,0.697801167972428,0,0,0.37129905888014,0.994192127183747,1.34465029290355,1.20538905604795,0.730310090387373,3.41552959153355,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.66198622559563,1.40381113229099,0.651032612147555,0,0,0,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.768482119587302,0,0,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.797854630486527,0.852449501065388,0,0.56738522469114,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.384273959177026,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,1.34140171940727,1.2786256184353,0,0.50133791063589,0,0,0,0,0.221729397462564,0,0,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0.516833518338658,0,0,1.20848795132744,4.56163263431108,0,1.10298924103761,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.662045904066094,3.15520282823695,0,0,0,0,1.24484414159907,0.942974704487816,1.79808093424805,0.302714855289863,0.576175924479999,0,2.18512053781224,1.1409436430889,0.896692083310806,0,0.161872944368132,0,0,0,0.206651562351531,1.18800285728205,0,3.64064544775211,0,0,0,0,0,0,1.05166641234618,1.02088964844019,0.358779271377724,0,0.211931901159562,0.600182192168805,0.206105058476878,0,0,2.53164498361899,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,0.4115740113314,0,0,0,0,0,0,1.20097467208968,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,1.52631302506568,0,0,0.380508304469197,0,0,0,0,0,0,0,0.283550194484773,0.447792613514241,0.871901815541886,0,0,0,0.829312462163088,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0.775630294546667,0,3.381211010224,0.797814349754612,0,0,0,0,0.57191197463259,0,0,0.65147236858747,0.710783897485092,2.37585561880029,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0.394061520403854,0.215627574859517,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0,0,0,0.771048469013278,0.532685175939381,0.0821271560138091,1.55776328755086,0.116210378459959,0,0,0,0.114814448164607,0.910455840033585,0.131124414959424,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,0.764628819135115,0,0,0,0,0,0,0,1.23649213977267,0.366277859273374,0.165018999841176,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0,0.170453254832202,0.0890320356467374,0.330569830721956,0,1.27612712494584,0,0.464845549297286,1.25924938732256,0,1.23213432070436,3.19383618190213,4.34966496037536,2.96518750566272,1.43124886741991,0,0.632758849437452,0.762520775695299,0.511795582622668,0,0,2.35484592059769,0.179872457583315,1.09814811894422,0.353437207037059,1.81964233415984,7.92551605865041,8.00391066854064,0,21.9342140668156,6.33900880540533,0.136499911407986,2.68670320712054,0,0,5.97095077717098,5.26141062304515,0,0,1.21746226177622,1.239293992399,0.845086807596724,0.573645408816206,0,1.07001315444375,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,3.00533503561846,0,0,0,0,0,0.102268682502155,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,5.38668266925187,0,0,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0.794858446811959,0,0,0.400794101257669,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,1.11712960508902,2.06244381610515,0,6.7890860169657,14.1644595885068,3.57074331906996,5.24031085396465,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0.449947783103001,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,2.15144807199414,0,2.1440859791201,9.26928758511604,0.25426853765475,1.08599920350743,3.45688596480507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| ||
|short_description=p6@ARHGAP31 | |||
}} | }} |
Latest revision as of 19:36, 19 September 2015
Short description: | p6@ARHGAP31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGAP31_5end |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | -311bp_to_ENST00000264245, NM_020754, uc003ecj.3_5end |
EntrezGene: | ARHGAP31 |
HGNC: | 29216 |
UniProt: | Q2M1Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.33e-26 | 32 |
smooth muscle cell | 7.03e-22 | 43 |
smooth muscle myoblast | 7.03e-22 | 43 |
muscle cell | 3.94e-19 | 55 |
muscle precursor cell | 8.48e-18 | 58 |
myoblast | 8.48e-18 | 58 |
multi-potent skeletal muscle stem cell | 8.48e-18 | 58 |
electrically responsive cell | 1.34e-16 | 61 |
electrically active cell | 1.34e-16 | 61 |
cardiocyte | 1.29e-13 | 16 |
aortic smooth muscle cell | 6.35e-11 | 10 |
smooth muscle cell of the subclavian artery | 3.07e-09 | 5 |
smooth muscle cell of the coronary artery | 9.68e-09 | 3 |
mesodermal cell | 2.69e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.78e-13 | 14 |
female reproductive organ cancer | 3.15e-09 | 27 |
reproductive organ cancer | 2.02e-08 | 29 |
cell type benign neoplasm | 5.14e-08 | 3 |
leiomyoma | 5.14e-08 | 3 |