FFCP PHASE1:Hg19::chrX:140271249..140271333,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23641 | |EntrezGene=23641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6548 | |HGNC=6548 | ||
|TSSclassifier=strong | |||
|UniProt=O95751 | |UniProt=O95751 | ||
|association_with_transcript=0bp_to_ENST00000370526,NM_012317,uc004fbj.2_5end | |association_with_transcript=0bp_to_ENST00000370526,NM_012317,uc004fbj.2_5end | ||
|cluster_id=chrX:140271249..140271333,- | |||
|coexpression_cluster_id=C4853 | |||
|description=CAGE_peak_1_at_LDOC1_5end | |description=CAGE_peak_1_at_LDOC1_5end | ||
|id=chrX:140271249..140271333,- | |id=chrX:140271249..140271333,- | ||
|ontology_enrichment_celltype=CL:0000222!1.75e-19!119;CL:0000183!1.52e-17!59;CL:0000680!1.59e-15!57;CL:0000056!1.59e-15!57;CL:0000355!1.59e-15!57;CL:0000187!2.14e-15!54;CL:0000055!4.25e-15!180;CL:0000192!4.89e-15!42;CL:0000514!4.89e-15!42;CL:0000359!1.50e-13!32;CL:0000393!1.74e-13!60;CL:0000211!1.74e-13!60;CL:0000220!3.37e-09!246;CL:0002321!1.29e-08!248;CL:1000449!4.90e-07!16 | |ontology_enrichment_celltype=CL:0000222!1.75e-19!119;CL:0000183!1.52e-17!59;CL:0000680!1.59e-15!57;CL:0000056!1.59e-15!57;CL:0000355!1.59e-15!57;CL:0000187!2.14e-15!54;CL:0000055!4.25e-15!180;CL:0000192!4.89e-15!42;CL:0000514!4.89e-15!42;CL:0000359!1.50e-13!32;CL:0000393!1.74e-13!60;CL:0000211!1.74e-13!60;CL:0000220!3.37e-09!246;CL:0002321!1.29e-08!248;CL:1000449!4.90e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.21e-13;32!CL:0000192;9.33e-11;43!CL:0000187;2.29e-08;55!CL:1000449;1.62e-07;15!CL:0000393;2.38e-07;61!CL:0000211;2.38e-07;61!CL:1000497;9.52e-07;17!CL:0002518;9.52e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.03e-19,121;CL:0000680,2.74e-15,58;CL:0000056,2.74e-15,58;CL:0000355,2.74e-15,58;CL:0000187,3.80e-15,55;CL:0000192,1.02e-14,43;CL:0000514,1.02e-14,43;CL:0000359,1.33e-13,32;CL:0000393,2.54e-13,61;CL:0000211,2.54e-13,61;CL:0002321,9.02e-09,250;CL:1000449,1.64e-07,15;CL:1000497,9.87e-07,17;CL:0002518,9.87e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;9.33e-11;43!CL:0000355;3.79e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.54e-36!312;UBERON:0000483!2.53e-35!309;UBERON:0000477!2.89e-34!286;UBERON:0000475!7.62e-32!365;UBERON:0000025!5.73e-28!194;UBERON:0004111!1.23e-27!241;UBERON:0000481!1.21e-26!347;UBERON:0003075!3.37e-20!86;UBERON:0007284!3.37e-20!86;UBERON:0001049!1.65e-18!57;UBERON:0005068!1.65e-18!57;UBERON:0006241!1.65e-18!57;UBERON:0007135!1.65e-18!57;UBERON:0000955!2.53e-18!69;UBERON:0006238!2.53e-18!69;UBERON:0002616!2.87e-18!59;UBERON:0002346!5.43e-18!90;UBERON:0000033!6.10e-18!123;UBERON:0004121!7.08e-18!169;UBERON:0005743!9.66e-18!86;UBERON:0001017!2.91e-17!82;UBERON:0002049!4.90e-17!79;UBERON:0007798!4.90e-17!79;UBERON:0003056!1.31e-16!61;UBERON:0000924!1.60e-16!173;UBERON:0006601!1.60e-16!173;UBERON:0000153!4.24e-16!129;UBERON:0007811!4.24e-16!129;UBERON:0001981!4.67e-16!60;UBERON:0007500!4.67e-16!60;UBERON:0004537!4.67e-16!60;UBERON:0006965!4.67e-16!60;UBERON:0000073!6.34e-16!94;UBERON:0001016!6.34e-16!94;UBERON:0001637!1.69e-15!42;UBERON:0003509!1.69e-15!42;UBERON:0004572!1.69e-15!42;UBERON:0002050!2.95e-15!605;UBERON:0005423!2.95e-15!605;UBERON:0000468!3.04e-15!659;UBERON:0000914!3.10e-15!83;UBERON:0002329!3.10e-15!83;UBERON:0003077!3.10e-15!83;UBERON:0003059!3.10e-15!83;UBERON:0007282!3.10e-15!83;UBERON:0009618!3.10e-15!83;UBERON:0007285!3.10e-15!83;UBERON:0000923!4.00e-15!604;UBERON:0005291!4.00e-15!604;UBERON:0006598!4.00e-15!604;UBERON:0002532!4.00e-15!604;UBERON:0004290!4.65e-15!70;UBERON:0004872!7.14e-15!84;UBERON:0000055!7.91e-15!69;UBERON:0000486!1.43e-14!82;UBERON:0000480!1.58e-14!626;UBERON:0002780!1.66e-14!41;UBERON:0001890!1.66e-14!41;UBERON:0006240!1.66e-14!41;UBERON:0000467!1.69e-14!625;UBERON:0001134!3.24e-14!61;UBERON:0002036!3.24e-14!61;UBERON:0003082!3.24e-14!61;UBERON:0003080!4.01e-14!42;UBERON:0005256!5.74e-14!143;UBERON:0000922!6.93e-14!612;UBERON:0002385!1.21e-13!63;UBERON:0001015!1.21e-13!63;UBERON:0000383!1.21e-13!63;UBERON:0000064!2.42e-13!219;UBERON:0003914!6.03e-13!118;UBERON:0004573!3.85e-12!33;UBERON:0004571!3.85e-12!33;UBERON:0002100!4.10e-12!216;UBERON:0001893!5.82e-12!34;UBERON:0002020!9.16e-12!34;UBERON:0003528!9.16e-12!34;UBERON:0002791!1.90e-11!33;UBERON:0001869!3.03e-11!32;UBERON:0004535!8.62e-11!110;UBERON:0000490!3.62e-10!138;UBERON:0001009!6.09e-10!113;UBERON:0002619!2.06e-09!22;UBERON:0003104!2.75e-09!238;UBERON:0009142!2.75e-09!238;UBERON:0000956!3.28e-09!25;UBERON:0000203!3.28e-09!25;UBERON:0001950!1.14e-08!20;UBERON:0007023!2.64e-08!115;UBERON:0000947!1.91e-07!21;UBERON:0010191!1.91e-07!21;UBERON:0000080!4.49e-07!18;UBERON:0002120!4.49e-07!18;UBERON:0004875!4.49e-07!18;UBERON:0005721!4.49e-07!18;UBERON:0005754!4.49e-07!18;UBERON:0007297!4.49e-07!18;UBERON:0004211!4.90e-07!16;UBERON:0001285!4.90e-07!16;UBERON:0007684!4.90e-07!16;UBERON:0003220!4.90e-07!16;UBERON:0004208!4.90e-07!16;UBERON:0006555!7.31e-07!17;UBERON:0005103!7.31e-07!17;UBERON:0000083!7.31e-07!17;UBERON:0009201!7.31e-07!17;UBERON:0004819!7.31e-07!17;UBERON:0006553!7.31e-07!17;UBERON:0003074!7.31e-07!17;UBERON:0003060!7.31e-07!17;UBERON:0004876!7.85e-07!20 | |ontology_enrichment_uberon=UBERON:0000119!4.54e-36!312;UBERON:0000483!2.53e-35!309;UBERON:0000477!2.89e-34!286;UBERON:0000475!7.62e-32!365;UBERON:0000025!5.73e-28!194;UBERON:0004111!1.23e-27!241;UBERON:0000481!1.21e-26!347;UBERON:0003075!3.37e-20!86;UBERON:0007284!3.37e-20!86;UBERON:0001049!1.65e-18!57;UBERON:0005068!1.65e-18!57;UBERON:0006241!1.65e-18!57;UBERON:0007135!1.65e-18!57;UBERON:0000955!2.53e-18!69;UBERON:0006238!2.53e-18!69;UBERON:0002616!2.87e-18!59;UBERON:0002346!5.43e-18!90;UBERON:0000033!6.10e-18!123;UBERON:0004121!7.08e-18!169;UBERON:0005743!9.66e-18!86;UBERON:0001017!2.91e-17!82;UBERON:0002049!4.90e-17!79;UBERON:0007798!4.90e-17!79;UBERON:0003056!1.31e-16!61;UBERON:0000924!1.60e-16!173;UBERON:0006601!1.60e-16!173;UBERON:0000153!4.24e-16!129;UBERON:0007811!4.24e-16!129;UBERON:0001981!4.67e-16!60;UBERON:0007500!4.67e-16!60;UBERON:0004537!4.67e-16!60;UBERON:0006965!4.67e-16!60;UBERON:0000073!6.34e-16!94;UBERON:0001016!6.34e-16!94;UBERON:0001637!1.69e-15!42;UBERON:0003509!1.69e-15!42;UBERON:0004572!1.69e-15!42;UBERON:0002050!2.95e-15!605;UBERON:0005423!2.95e-15!605;UBERON:0000468!3.04e-15!659;UBERON:0000914!3.10e-15!83;UBERON:0002329!3.10e-15!83;UBERON:0003077!3.10e-15!83;UBERON:0003059!3.10e-15!83;UBERON:0007282!3.10e-15!83;UBERON:0009618!3.10e-15!83;UBERON:0007285!3.10e-15!83;UBERON:0000923!4.00e-15!604;UBERON:0005291!4.00e-15!604;UBERON:0006598!4.00e-15!604;UBERON:0002532!4.00e-15!604;UBERON:0004290!4.65e-15!70;UBERON:0004872!7.14e-15!84;UBERON:0000055!7.91e-15!69;UBERON:0000486!1.43e-14!82;UBERON:0000480!1.58e-14!626;UBERON:0002780!1.66e-14!41;UBERON:0001890!1.66e-14!41;UBERON:0006240!1.66e-14!41;UBERON:0000467!1.69e-14!625;UBERON:0001134!3.24e-14!61;UBERON:0002036!3.24e-14!61;UBERON:0003082!3.24e-14!61;UBERON:0003080!4.01e-14!42;UBERON:0005256!5.74e-14!143;UBERON:0000922!6.93e-14!612;UBERON:0002385!1.21e-13!63;UBERON:0001015!1.21e-13!63;UBERON:0000383!1.21e-13!63;UBERON:0000064!2.42e-13!219;UBERON:0003914!6.03e-13!118;UBERON:0004573!3.85e-12!33;UBERON:0004571!3.85e-12!33;UBERON:0002100!4.10e-12!216;UBERON:0001893!5.82e-12!34;UBERON:0002020!9.16e-12!34;UBERON:0003528!9.16e-12!34;UBERON:0002791!1.90e-11!33;UBERON:0001869!3.03e-11!32;UBERON:0004535!8.62e-11!110;UBERON:0000490!3.62e-10!138;UBERON:0001009!6.09e-10!113;UBERON:0002619!2.06e-09!22;UBERON:0003104!2.75e-09!238;UBERON:0009142!2.75e-09!238;UBERON:0000956!3.28e-09!25;UBERON:0000203!3.28e-09!25;UBERON:0001950!1.14e-08!20;UBERON:0007023!2.64e-08!115;UBERON:0000947!1.91e-07!21;UBERON:0010191!1.91e-07!21;UBERON:0000080!4.49e-07!18;UBERON:0002120!4.49e-07!18;UBERON:0004875!4.49e-07!18;UBERON:0005721!4.49e-07!18;UBERON:0005754!4.49e-07!18;UBERON:0007297!4.49e-07!18;UBERON:0004211!4.90e-07!16;UBERON:0001285!4.90e-07!16;UBERON:0007684!4.90e-07!16;UBERON:0003220!4.90e-07!16;UBERON:0004208!4.90e-07!16;UBERON:0006555!7.31e-07!17;UBERON:0005103!7.31e-07!17;UBERON:0000083!7.31e-07!17;UBERON:0009201!7.31e-07!17;UBERON:0004819!7.31e-07!17;UBERON:0006553!7.31e-07!17;UBERON:0003074!7.31e-07!17;UBERON:0003060!7.31e-07!17;UBERON:0004876!7.85e-07!20 | ||
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|short_description=p1@LDOC1 | |short_description=p1@LDOC1 | ||
}} | }} |
Latest revision as of 19:34, 19 September 2015
Short description: | p1@LDOC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LDOC1_5end |
Coexpression cluster: | C4853_Renal_aorta_Mesenchymal_pituitary_Smooth_Fibroblast_mesothelioma |
Association with transcript: | 0bp_to_ENST00000370526, NM_012317, uc004fbj.2_5end |
EntrezGene: | LDOC1 |
HGNC: | 6548 |
UniProt: | O95751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.03e-19 | 121 |
muscle precursor cell | 2.74e-15 | 58 |
myoblast | 2.74e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.74e-15 | 58 |
muscle cell | 3.80e-15 | 55 |
smooth muscle cell | 1.02e-14 | 43 |
smooth muscle myoblast | 1.02e-14 | 43 |
vascular associated smooth muscle cell | 1.33e-13 | 32 |
electrically responsive cell | 2.54e-13 | 61 |
electrically active cell | 2.54e-13 | 61 |
embryonic cell | 9.02e-09 | 250 |
epithelial cell of nephron | 1.64e-07 | 15 |
kidney cell | 9.87e-07 | 17 |
kidney epithelial cell | 9.87e-07 | 17 |