FFCP PHASE1:Hg19::chrX:140270547..140270568,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:140270547..140270568,- to FFCP PHASE1:Hg19::chrX:140270547..140270568,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23641 | |EntrezGene=23641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6548 | |HGNC=6548 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-244bp_to_AF086537_5end | |||
|cluster_id=chrX:140270547..140270568,- | |||
|coexpression_cluster_id=C4853 | |||
|description=CAGE_peak_4_at_LDOC1_5end | |||
|id=chrX:140270547..140270568,- | |||
|ontology_enrichment_celltype=CL:0000055!5.03e-12!180;CL:0000222!8.86e-12!119;CL:0000183!5.14e-10!59;CL:0000680!6.88e-09!57;CL:0000056!6.88e-09!57;CL:0000355!6.88e-09!57;CL:0000393!1.17e-08!60;CL:0000211!1.17e-08!60;CL:0000192!1.49e-08!42;CL:0000514!1.49e-08!42;CL:0000187!1.63e-08!54;CL:0000359!2.62e-07!32;CL:0000057!5.45e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.64e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.60e-11,121;CL:0000680,1.03e-08,58;CL:0000056,1.03e-08,58;CL:0000355,1.03e-08,58;CL:0000393,1.82e-08,61;CL:0000211,1.82e-08,61;CL:0000187,2.58e-08,55;CL:0000192,5.18e-08,43;CL:0000514,5.18e-08,43;CL:0000359,3.27e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!3.66e-25!286;UBERON:0000119!1.83e-23!312;UBERON:0000483!4.51e-23!309;UBERON:0000475!6.35e-23!365;UBERON:0004111!3.55e-19!241;UBERON:0000481!3.01e-18!347;UBERON:0000025!1.27e-17!194;UBERON:0001049!5.68e-16!57;UBERON:0005068!5.68e-16!57;UBERON:0006241!5.68e-16!57;UBERON:0007135!5.68e-16!57;UBERON:0002616!2.48e-15!59;UBERON:0003075!4.99e-15!86;UBERON:0007284!4.99e-15!86;UBERON:0005743!8.46e-15!86;UBERON:0001017!1.80e-14!82;UBERON:0002346!6.00e-14!90;UBERON:0003056!8.66e-14!61;UBERON:0000955!1.06e-13!69;UBERON:0006238!1.06e-13!69;UBERON:0000033!1.40e-13!123;UBERON:0003080!2.65e-13!42;UBERON:0002780!3.08e-13!41;UBERON:0001890!3.08e-13!41;UBERON:0006240!3.08e-13!41;UBERON:0004121!3.96e-13!169;UBERON:0000468!5.40e-13!659;UBERON:0000073!6.66e-13!94;UBERON:0001016!6.66e-13!94;UBERON:0000924!1.57e-12!173;UBERON:0006601!1.57e-12!173;UBERON:0000153!2.42e-12!129;UBERON:0007811!2.42e-12!129;UBERON:0001893!1.66e-11!34;UBERON:0002020!1.69e-11!34;UBERON:0003528!1.69e-11!34;UBERON:0000064!1.82e-11!219;UBERON:0000480!2.43e-11!626;UBERON:0002050!3.21e-11!605;UBERON:0005423!3.21e-11!605;UBERON:0000467!3.33e-11!625;UBERON:0002791!3.38e-11!33;UBERON:0000923!4.17e-11!604;UBERON:0005291!4.17e-11!604;UBERON:0006598!4.17e-11!604;UBERON:0002532!4.17e-11!604;UBERON:0001869!5.66e-11!32;UBERON:0000922!1.51e-10!612;UBERON:0002049!9.74e-10!79;UBERON:0007798!9.74e-10!79;UBERON:0002619!1.89e-09!22;UBERON:0000914!2.21e-09!83;UBERON:0002329!2.21e-09!83;UBERON:0003077!2.21e-09!83;UBERON:0003059!2.21e-09!83;UBERON:0007282!2.21e-09!83;UBERON:0009618!2.21e-09!83;UBERON:0007285!2.21e-09!83;UBERON:0001637!2.23e-09!42;UBERON:0003509!2.23e-09!42;UBERON:0004572!2.23e-09!42;UBERON:0001950!3.19e-09!20;UBERON:0004872!3.72e-09!84;UBERON:0000956!4.18e-09!25;UBERON:0000203!4.18e-09!25;UBERON:0001981!5.99e-09!60;UBERON:0007500!5.99e-09!60;UBERON:0004537!5.99e-09!60;UBERON:0006965!5.99e-09!60;UBERON:0005256!8.93e-09!143;UBERON:0004290!9.32e-09!70;UBERON:0000486!9.57e-09!82;UBERON:0000055!1.38e-08!69;UBERON:0001134!3.54e-08!61;UBERON:0002036!3.54e-08!61;UBERON:0003082!3.54e-08!61;UBERON:0002385!5.69e-08!63;UBERON:0001015!5.69e-08!63;UBERON:0000383!5.69e-08!63;UBERON:0004573!7.96e-08!33;UBERON:0004571!7.96e-08!33;UBERON:0003914!2.19e-07!118;UBERON:0002100!5.81e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;6.59e-11;32!UBERON:0001893;8.00e-11;34!UBERON:0003528;8.21e-11;34!UBERON:0002020;8.21e-11;34!UBERON:0001869;8.85e-11;32!UBERON:0002780;2.73e-10;41!UBERON:0001890;2.73e-10;41!UBERON:0002619;6.88e-10;22!UBERON:0000073;9.14e-10;53!UBERON:0002616;9.14e-10;53!UBERON:0000956;1.04e-09;25!UBERON:0000203;1.04e-09;25!UBERON:0001950;1.30e-09;20!UBERON:0004573;3.09e-07;33!UBERON:0004571;3.09e-07;33!UBERON:0001637;4.26e-07;42!UBERON:0003509;4.26e-07;42!UBERON:0004572;4.26e-07;42!UBERON:0000955;5.50e-07;68!UBERON:0001017;9.79e-07;75 | |||
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| ||
|short_description=p4@LDOC1 | |||
}} | }} |
Latest revision as of 19:29, 19 September 2015
Short description: | p4@LDOC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LDOC1_5end |
Coexpression cluster: | C4853_Renal_aorta_Mesenchymal_pituitary_Smooth_Fibroblast_mesothelioma |
Association with transcript: | -244bp_to_AF086537_5end |
EntrezGene: | LDOC1 |
HGNC: | 6548 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.60e-11 | 121 |
muscle precursor cell | 1.03e-08 | 58 |
myoblast | 1.03e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-08 | 58 |
electrically responsive cell | 1.82e-08 | 61 |
electrically active cell | 1.82e-08 | 61 |
muscle cell | 2.58e-08 | 55 |
smooth muscle cell | 5.18e-08 | 43 |
smooth muscle myoblast | 5.18e-08 | 43 |
vascular associated smooth muscle cell | 3.27e-07 | 32 |