FFCP PHASE1:Hg19::chr2:208394431..208394446,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1385 | |EntrezGene=1385 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2345 | |HGNC=2345 | ||
|TSSclassifier=strong | |||
|UniProt=F8W746 | |UniProt=F8W746 | ||
|association_with_transcript=-14bp_to_ENST00000236996,ENST00000430624_5end | |association_with_transcript=-14bp_to_ENST00000236996,ENST00000430624_5end | ||
|cluster_id=chr2:208394431..208394446,+ | |||
|coexpression_cluster_id=C168 | |coexpression_cluster_id=C168 | ||
|description=CAGE_peak_9_at_CREB1_5end | |description=CAGE_peak_9_at_CREB1_5end | ||
|id=chr2:208394431..208394446,+ | |id=chr2:208394431..208394446,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.02e-26!42;CL:0000860!1.13e-25!45;CL:0000557!1.43e-22!71;CL:0002031!1.70e-22!124;CL:0000738!5.19e-22!140;CL:0000766!2.81e-20!76;CL:0002009!7.98e-20!65;CL:0000839!1.65e-19!70;CL:0002087!3.02e-18!119;CL:0000988!1.75e-17!182;CL:0002194!3.02e-17!63;CL:0000576!3.02e-17!63;CL:0000040!3.02e-17!63;CL:0000559!3.02e-17!63;CL:0000037!2.05e-16!172;CL:0000566!2.05e-16!172;CL:0002032!1.01e-15!165;CL:0000837!1.01e-15!165;CL:0000763!5.08e-13!112;CL:0000049!5.08e-13!112 | |ontology_enrichment_celltype=CL:0002057!6.02e-26!42;CL:0000860!1.13e-25!45;CL:0000557!1.43e-22!71;CL:0002031!1.70e-22!124;CL:0000738!5.19e-22!140;CL:0000766!2.81e-20!76;CL:0002009!7.98e-20!65;CL:0000839!1.65e-19!70;CL:0002087!3.02e-18!119;CL:0000988!1.75e-17!182;CL:0002194!3.02e-17!63;CL:0000576!3.02e-17!63;CL:0000040!3.02e-17!63;CL:0000559!3.02e-17!63;CL:0000037!2.05e-16!172;CL:0000566!2.05e-16!172;CL:0002032!1.01e-15!165;CL:0000837!1.01e-15!165;CL:0000763!5.08e-13!112;CL:0000049!5.08e-13!112 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.54e-31;2!CL:0001016;2.54e-31;2!CL:0000097;1.74e-28;5!CL:0000163;3.79e-16;9!CL:0000453;3.65e-13;5!CL:0000136;3.56e-11;13!CL:0000840;3.95e-11;5!CL:0000860;1.12e-10;33!CL:0002057;1.12e-10;33!CL:0000473;1.41e-10;39!CL:0000234;1.41e-10;39!CL:0000766;6.17e-09;69!CL:0000990;1.02e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.18e-31,2;CL:0001016,2.18e-31,2;CL:0000097,1.44e-28,5;CL:0002028,1.44e-28,5;CL:0000557,1.57e-21,67;CL:0000163,3.42e-16,9;CL:0000839,5.65e-14,66;CL:0000453,3.43e-13,5;CL:0000763,4.23e-13,108;CL:0000049,4.23e-13,108;CL:0000766,8.95e-13,72;CL:0002031,1.04e-11,120;CL:0002009,1.50e-11,61;CL:0000840,3.75e-11,5;CL:0001029,3.75e-11,5;CL:0000738,3.17e-10,136;CL:0000136,8.15e-10,15;CL:0000860,4.87e-09,42;CL:0002057,4.87e-09,42;CL:0002032,1.72e-08,161;CL:0000837,1.72e-08,161;CL:0000037,4.27e-08,168;CL:0000473,6.61e-08,48;CL:0000234,6.61e-08,48;CL:0000990,9.85e-08,8;CL:0000988,1.24e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-23!102;UBERON:0003061!1.24e-23!102;UBERON:0002193!9.83e-22!112;UBERON:0002371!1.82e-20!80;UBERON:0001474!2.23e-18!86;UBERON:0004765!2.50e-15!101;UBERON:0001434!2.50e-15!101;UBERON:0002405!4.11e-15!115;UBERON:0003081!2.27e-08!216;UBERON:0002204!6.25e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!1.24e-23!102;UBERON:0003061!1.24e-23!102;UBERON:0002193!9.83e-22!112;UBERON:0002371!1.82e-20!80;UBERON:0001474!2.23e-18!86;UBERON:0004765!2.50e-15!101;UBERON:0001434!2.50e-15!101;UBERON:0002405!4.11e-15!115;UBERON:0003081!2.27e-08!216;UBERON:0002204!6.25e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-19,76;UBERON:0001474,1.74e-17,82;UBERON:0004765,7.15e-16,90;UBERON:0002405,2.45e-15,93;UBERON:0002390,1.62e-14,98;UBERON:0003061,1.62e-14,98;UBERON:0001434,3.27e-14,100;UBERON:0002193,4.23e-13,108;UBERON:0002204,3.77e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0.651032612147555,0,0.32389366601898,0,0,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0.575384784644301,0.512321413058201,0.236482229888585,1.72372840368309,1.29096936716765,1.35426486594342,0.188242339542605,0,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0.426224750532694,1.16083695451434,1.13477044938228,0,0.75374599577023,0,0.434377689410233,0,0.736555271975129,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,3.31724984865235,1.58531948758658,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0.664653872707185,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,1.5476039091159,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,1.08803560673895,0.7520696820681,1.83807346058077,1.96723578425883,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0.651032612147555,0,0.32389366601898,0,0,0,0,0.232429036905685,0.411167888021826,0.929119112685311,0.575384784644301,0.512321413058201,0.236482229888585,1.72372840368309,1.29096936716765,1.35426486594342,0.188242339542605,0,0.224723484445085,0.918251677112708,0.320929027076094,0,0,0,0.426224750532694,1.16083695451434,1.13477044938228,0,0.75374599577023,0,0.434377689410233,0,0.736555271975129,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,3.31724984865235,1.58531948758658,4.54472760334968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0.664653872707185,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,1.5476039091159,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.243585196761792,0,1.08803560673895,0.7520696820681,1.83807346058077,1.96723578425883,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p9@CREB1 | |short_description=p9@CREB1 | ||
}} | }} |
Latest revision as of 19:17, 19 September 2015
Short description: | p9@CREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CREB1_5end |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | -14bp_to_ENST00000236996, ENST00000430624_5end |
EntrezGene: | CREB1 |
HGNC: | 2345 |
UniProt: | F8W746 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.18e-31 | 2 |
immature CD1a-positive Langerhans cell | 2.18e-31 | 2 |
mast cell | 1.44e-28 | 5 |
basophil mast progenitor cell | 1.44e-28 | 5 |
granulocyte monocyte progenitor cell | 1.57e-21 | 67 |
endocrine cell | 3.42e-16 | 9 |
myeloid lineage restricted progenitor cell | 5.65e-14 | 66 |
Langerhans cell | 3.43e-13 | 5 |
myeloid cell | 4.23e-13 | 108 |
common myeloid progenitor | 4.23e-13 | 108 |
myeloid leukocyte | 8.95e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 1.04e-11 | 120 |
macrophage dendritic cell progenitor | 1.50e-11 | 61 |
immature conventional dendritic cell | 3.75e-11 | 5 |
common dendritic progenitor | 3.75e-11 | 5 |
leukocyte | 3.17e-10 | 136 |
fat cell | 8.15e-10 | 15 |
classical monocyte | 4.87e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.87e-09 | 42 |
hematopoietic oligopotent progenitor cell | 1.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-08 | 161 |
hematopoietic stem cell | 4.27e-08 | 168 |
defensive cell | 6.61e-08 | 48 |
phagocyte | 6.61e-08 | 48 |
conventional dendritic cell | 9.85e-08 | 8 |
hematopoietic cell | 1.24e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-19 | 76 |
bone element | 1.74e-17 | 82 |
skeletal element | 7.15e-16 | 90 |
immune system | 2.45e-15 | 93 |
hematopoietic system | 1.62e-14 | 98 |
blood island | 1.62e-14 | 98 |
skeletal system | 3.27e-14 | 100 |
hemolymphoid system | 4.23e-13 | 108 |
musculoskeletal system | 3.77e-08 | 167 |