FFCP PHASE1:Hg19::chr3:8775466..8775512,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1529 | |||
|TSSclassifier=strong | |||
|UniProt=P56539,A8K777 | |||
|association_with_transcript=0bp_to_ENST00000343849,NM_001234,NM_033337,uc003bra.2,uc003brb.2_5end | |||
|cluster_id=chr3:8775466..8775512,+ | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_1_at_CAV3_5end | |||
|id=chr3:8775466..8775512,+ | |||
|ontology_enrichment_celltype=CL:0000188!5.34e-14!9;CL:0000594!9.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.38e-19;9!CL:0000680;5.51e-13;7!CL:0000515;1.38e-11;3!CL:0000056;8.48e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.46e-19,9;CL:0000515,8.60e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.48e-09;4!UBERON:0005062;1.09e-08;4!UBERON:0007284;1.09e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.29e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.82e-21!115;UBERON:0004151!6.31e-07!3;UBERON:0003978!6.43e-07!3;UBERON:0009751!6.43e-07!3;UBERON:0000946!6.43e-07!3;UBERON:0002523!6.43e-07!3;UBERON:0005983!6.43e-07!3;UBERON:0002165!6.43e-07!3;UBERON:0002062!6.43e-07!3;UBERON:0007280!6.43e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.05e-43;16!UBERON:0002036;2.05e-43;16!UBERON:0002385;2.62e-20;31!UBERON:0001015;2.62e-20;31!UBERON:0000383;2.62e-20;31!UBERON:0003978;1.95e-11;3!UBERON:0000946;1.95e-11;3!UBERON:0004151;1.98e-11;3!UBERON:0007100;2.13e-10;25!UBERON:0005090;4.78e-09;2!UBERON:0001630;4.78e-09;2!UBERON:0000341;5.57e-09;2!UBERON:0002133;4.93e-08;2!UBERON:0002081;6.12e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.95e-11,3;UBERON:0003978,2.02e-11,3;UBERON:0009751,2.02e-11,3;UBERON:0000946,2.02e-11,3;UBERON:0002523,2.02e-11,3;UBERON:0005983,2.02e-11,3;UBERON:0002165,2.02e-11,3;UBERON:0002062,2.02e-11,3;UBERON:0007280,2.02e-11,3;UBERON:0001134,4.40e-10,62;UBERON:0002036,4.40e-10,62;UBERON:0003082,4.40e-10,62;UBERON:0007023,6.34e-10,114;UBERON:0002385,1.16e-09,64;UBERON:0001015,1.16e-09,64;UBERON:0000383,1.16e-09,64;UBERON:0007100,1.66e-09,27;UBERON:0005090,4.78e-09,2;UBERON:0001630,4.78e-09,2;UBERON:0000341,5.58e-09,2;UBERON:0002329,2.24e-08,71;UBERON:0003059,2.24e-08,71;UBERON:0007282,2.24e-08,71;UBERON:0004290,2.24e-08,71;UBERON:0009618,2.24e-08,71;UBERON:0003077,3.25e-08,72;UBERON:0007285,3.25e-08,72;UBERON:0007524,4.67e-08,73;UBERON:0002133,5.02e-08,2;UBERON:0002081,6.01e-08,2;UBERON:0010227,6.01e-08,2;UBERON:0007503,2.49e-07,78;UBERON:0005256,2.79e-07,122 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375355559615893,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,17.641045366265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4242540800657,4.31500277355805,11.2808406841134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,70.3444018812255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0.412164046590889,3.75434805755208,3.79543699634705,0,0,0,16.3373513913686,4.31336127921004,8.90321313411551,20.261976155226,0.429680979473094,7.68588477745411,17.5566852477168,66.2398345211726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,103.532516501544,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,9.60996675331166,0,0,0,0,1.84279131327997,0,4.51961481561065,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,12.2884256559792,13.062144168666,1.43574604915363,13.5781720339314,27.4704670807405,12.4976016167449,29.8966452565932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,7.86164859010704,19.8627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,1.798532254171,0,0,0,0,31.3784386890611,0,0,0,0,0.947015026375446,0.50313580350515,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,85.2059138732517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,1.5913297769302,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,47.6362731253722,0,0,0,3.69912094440706,0,0,0,0,1.02892805662451,0,0,0,0,0.39246546425257,0.157115589916002,0,0,0,0,1.35805433935647,0.316027223465453,0,4.52031507986707,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,52.4417358122195,59.9550792040483,379.259319047591,33.0283475280215,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0.515663103788617,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,35.1836070136618,79.9896489718168,0,0.372448285775147,0,0.25458863311266,3.84022659020617,60.9606894111492,111.225822852716,2.1552656964668,0.932388670104793,16.3003574707547,0,0,0,0,2.34640942403454,0.366724332548599,0,0,1.20764276154616,0 | |||
|short_description=p1@CAV3 | |||
}} |
Latest revision as of 18:44, 19 September 2015
Short description: | p1@CAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAV3_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 0bp_to_ENST00000343849, NM_001234, NM_033337, uc003bra.2, uc003brb.2_5end |
EntrezGene: | CAV3 |
HGNC: | 1529 |
UniProt: | P56539A8K777 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.46e-19 | 9 |
skeletal muscle myoblast | 8.60e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.95e-11 | 3 |
valve | 2.02e-11 | 3 |
cardiac mesenchyme | 2.02e-11 | 3 |
cardial valve | 2.02e-11 | 3 |
tunica intima | 2.02e-11 | 3 |
heart layer | 2.02e-11 | 3 |
endocardium | 2.02e-11 | 3 |
endocardial cushion | 2.02e-11 | 3 |
presumptive endocardium | 2.02e-11 | 3 |
skeletal muscle tissue | 4.40e-10 | 62 |
striated muscle tissue | 4.40e-10 | 62 |
myotome | 4.40e-10 | 62 |
adult organism | 6.34e-10 | 114 |
muscle tissue | 1.16e-09 | 64 |
musculature | 1.16e-09 | 64 |
musculature of body | 1.16e-09 | 64 |
primary circulatory organ | 1.66e-09 | 27 |
muscle structure | 4.78e-09 | 2 |
muscle organ | 4.78e-09 | 2 |
throat | 5.58e-09 | 2 |
somite | 2.24e-08 | 71 |
presomitic mesoderm | 2.24e-08 | 71 |
presumptive segmental plate | 2.24e-08 | 71 |
dermomyotome | 2.24e-08 | 71 |
trunk paraxial mesoderm | 2.24e-08 | 71 |
paraxial mesoderm | 3.25e-08 | 72 |
presumptive paraxial mesoderm | 3.25e-08 | 72 |
dense mesenchyme tissue | 4.67e-08 | 73 |
atrioventricular valve | 5.02e-08 | 2 |
cardiac atrium | 6.01e-08 | 2 |
future cardiac atrium | 6.01e-08 | 2 |
epithelial vesicle | 2.49e-07 | 78 |
trunk mesenchyme | 2.79e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.29e-08 | 2 |