FFCP PHASE1:Hg19::chr14:34488188..34488213,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112399 | |EntrezGene=112399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14661 | |HGNC=14661 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-327bp_to_ENST00000550114_5end | |association_with_transcript=-327bp_to_ENST00000550114_5end | ||
|cluster_id=chr14:34488188..34488213,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_4_at_EGLN3_5end | |description=CAGE_peak_4_at_EGLN3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!4.85e-18!18;CL:0000789!4.85e-18!18;CL:0002420!4.85e-18!18;CL:0002419!4.85e-18!18;CL:0000790!4.85e-18!18;CL:0000625!1.36e-16!11;CL:0000542!7.57e-15!53;CL:0000051!7.57e-15!53;CL:0000084!6.34e-14!25;CL:0000827!6.34e-14!25;CL:0000838!7.52e-14!52 | |ontology_enrichment_celltype=CL:0000791!4.85e-18!18;CL:0000789!4.85e-18!18;CL:0002420!4.85e-18!18;CL:0002419!4.85e-18!18;CL:0000790!4.85e-18!18;CL:0000625!1.36e-16!11;CL:0000542!7.57e-15!53;CL:0000051!7.57e-15!53;CL:0000084!6.34e-14!25;CL:0000827!6.34e-14!25;CL:0000838!7.52e-14!52 | ||
|ontology_enrichment_celltype_v019=CL:0000625;7.84e-37;11!CL:0000791;7.43e-33;18!CL:0000789;7.43e-33;18!CL:0002419;7.43e-33;18!CL:0000084;1.03e-27;25!CL:0000542;4.17e-08;53!CL:0000895;7.98e-07;1 | |ontology_enrichment_celltype_v019=CL:0000625;7.84e-37;11!CL:0000791;7.43e-33;18!CL:0000789;7.43e-33;18!CL:0002419;7.43e-33;18!CL:0000084;1.03e-27;25!CL:0000542;4.17e-08;53!CL:0000895;7.98e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.51e-37,11;CL:0000791,4.39e-33,18;CL:0000789,4.39e-33,18;CL:0002420,4.39e-33,18;CL:0002419,4.39e-33,18;CL:0000790,4.39e-33,18;CL:0000084,6.77e-28,25;CL:0000827,6.77e-28,25;CL:0000838,2.47e-14,52;CL:0000542,5.18e-14,53;CL:0000051,5.18e-14,53;CL:0000810,8.21e-07,1;CL:0000895,8.21e-07,1;CL:0002436,8.21e-07,1;CL:0002427,8.21e-07,1;CL:0002428,8.21e-07,1;CL:0002429,8.21e-07,1;CL:0002433,8.21e-07,1;CL:0002431,8.21e-07,1;CL:0002432,8.21e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;7.43e-33;18!CL:0000051;4.17e-08;53!CL:0002427;7.98e-07;1 | |ontology_enrichment_development_v019=CL:0000790;7.43e-33;18!CL:0000051;4.17e-08;53!CL:0002427;7.98e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.10e-22!115;UBERON:0000178!2.13e-13!15;UBERON:0000179!2.13e-13!15;UBERON:0000463!2.13e-13!15;UBERON:0002020!3.74e-09!34;UBERON:0003528!3.74e-09!34;UBERON:0001049!1.28e-07!57;UBERON:0005068!1.28e-07!57;UBERON:0006241!1.28e-07!57;UBERON:0007135!1.28e-07!57;UBERON:0001869!1.62e-07!32;UBERON:0000369!2.38e-07!4;UBERON:0002435!2.38e-07!4;UBERON:0000204!2.38e-07!4;UBERON:0010082!2.38e-07!4;UBERON:0002616!3.40e-07!59;UBERON:0002791!3.40e-07!33;UBERON:0002780!4.32e-07!41;UBERON:0001890!4.32e-07!41;UBERON:0006240!4.32e-07!41;UBERON:0001893!6.83e-07!34;UBERON:0003080!7.79e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!8.10e-22!115;UBERON:0000178!2.13e-13!15;UBERON:0000179!2.13e-13!15;UBERON:0000463!2.13e-13!15;UBERON:0002020!3.74e-09!34;UBERON:0003528!3.74e-09!34;UBERON:0001049!1.28e-07!57;UBERON:0005068!1.28e-07!57;UBERON:0006241!1.28e-07!57;UBERON:0007135!1.28e-07!57;UBERON:0001869!1.62e-07!32;UBERON:0000369!2.38e-07!4;UBERON:0002435!2.38e-07!4;UBERON:0000204!2.38e-07!4;UBERON:0010082!2.38e-07!4;UBERON:0002616!3.40e-07!59;UBERON:0002791!3.40e-07!33;UBERON:0002780!4.32e-07!41;UBERON:0001890!4.32e-07!41;UBERON:0006240!4.32e-07!41;UBERON:0001893!6.83e-07!34;UBERON:0003080!7.79e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-25;15!UBERON:0000179;1.48e-25;15!UBERON:0000463;1.48e-25;15!UBERON:0002390;8.77e-11;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.48e-25;15!UBERON:0000179;1.48e-25;15!UBERON:0000463;1.48e-25;15!UBERON:0002390;8.77e-11;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.65e-25,15;UBERON:0000179,1.65e-25,15;UBERON:0000463,1.65e-25,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0.196709770113833,1.96505381374582,0.205601498999509,4.01247588937627,0,0,0,7.79873198196215,0,0.443067789167242,0.270803863765016,9.73494029915131,7.80356085359269,3.61763390128087,1.38175008892924,1.44901542867526,1.4828656316206,3.74557159325598,1.04535523804977,3.28597093822942,5.3650869104269,8.24705869158312,4.80737414837055,3.50421955756506,5.85975108470777,1.90090408889675,2.10805166708882,2.94369205655162,3.74792179657038,4.2619905367923,1.64225599384209,1.20964045934839,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.72502059887614,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,1.52927441428475,1.70894156152249,1.19115887728894,1.64544909234478,1.94541993357815,1.08006287447623,1.58625035258854,0,0,0,0.557409525377156,0,8.39473751511287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.321146125482298,2.8339315265117,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0.514464028312255,0.0679697329768317,0,0,0,0.313972371402056,0.785577949580009,0,0,6.26190014534002,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0.775066918032073,0.434523000071005,0,0,0.202117188958219,0,0,0.336760265072938,0.143444410785353,0,0,0,0,0,0,0.244482888365733,1.22068853494722,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0.196709770113833,1.96505381374582,0.205601498999509,4.01247588937627,0,0,0,7.79873198196215,0,0.443067789167242,0.270803863765016,9.73494029915131,7.80356085359269,3.61763390128087,1.38175008892924,1.44901542867526,1.4828656316206,3.74557159325598,1.04535523804977,3.28597093822942,5.3650869104269,8.24705869158312,4.80737414837055,3.50421955756506,5.85975108470777,1.90090408889675,2.10805166708882,2.94369205655162,3.74792179657038,4.2619905367923,1.64225599384209,1.20964045934839,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.72502059887614,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,1.52927441428475,1.70894156152249,1.19115887728894,1.64544909234478,1.94541993357815,1.08006287447623,1.58625035258854,0,0,0,0.557409525377156,0,8.39473751511287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.321146125482298,2.8339315265117,0.319267718114302,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0.514464028312255,0.0679697329768317,0,0,0,0.313972371402056,0.785577949580009,0,0,6.26190014534002,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0.775066918032073,0.434523000071005,0,0,0.202117188958219,0,0,0.336760265072938,0.143444410785353,0,0,0,0,0,0,0.244482888365733,1.22068853494722,0,0.402547587182052,0 | ||
|short_description=p4@EGLN3 | |short_description=p4@EGLN3 | ||
}} | }} |
Latest revision as of 18:37, 19 September 2015
Short description: | p4@EGLN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EGLN3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -327bp_to_ENST00000550114_5end |
EntrezGene: | EGLN3 |
HGNC: | 14661 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.51e-37 | 11 |
mature alpha-beta T cell | 4.39e-33 | 18 |
alpha-beta T cell | 4.39e-33 | 18 |
immature T cell | 4.39e-33 | 18 |
mature T cell | 4.39e-33 | 18 |
immature alpha-beta T cell | 4.39e-33 | 18 |
T cell | 6.77e-28 | 25 |
pro-T cell | 6.77e-28 | 25 |
lymphoid lineage restricted progenitor cell | 2.47e-14 | 52 |
lymphocyte | 5.18e-14 | 53 |
common lymphoid progenitor | 5.18e-14 | 53 |
CD4-positive, alpha-beta thymocyte | 8.21e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.21e-07 | 1 |
mature CD4 single-positive thymocyte | 8.21e-07 | 1 |
resting double-positive thymocyte | 8.21e-07 | 1 |
double-positive blast | 8.21e-07 | 1 |
CD69-positive double-positive thymocyte | 8.21e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 8.21e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.21e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 1.65e-25 | 15 |
haemolymphatic fluid | 1.65e-25 | 15 |
organism substance | 1.65e-25 | 15 |