FFCP PHASE1:Hg19::chr1:201617784..201617804,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |||
|TSSclassifier=strong | |||
|UniProt=A8MYI2,Q8NEY1 | |||
|association_with_transcript=334bp_to_ENST00000295624,ENST00000367297,ENST00000367300,ENST00000391966,NM_020443,uc001gwu.2_5end | |||
|cluster_id=chr1:201617784..201617804,+ | |||
|description=CAGE_peak_2_at_NAV1_5end | |||
|id=chr1:201617784..201617804,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.03e-42!180;CL:0000057!5.98e-24!75;CL:0000680!2.04e-18!57;CL:0000056!2.04e-18!57;CL:0000355!2.04e-18!57;CL:0000393!3.68e-18!60;CL:0000211!3.68e-18!60;CL:0000183!2.27e-17!59;CL:0000187!2.56e-17!54;CL:0000192!7.10e-16!42;CL:0000514!7.10e-16!42;CL:0000359!2.03e-12!32;CL:0002620!1.67e-09!23;CL:0000222!3.22e-09!119;CL:0002334!3.40e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000192;9.97e-13;43!CL:0000359;1.24e-12;32!CL:0000057;1.09e-10;73!CL:0000393;1.47e-10;61!CL:0000211;1.47e-10;61!CL:0000187;1.77e-10;55!CL:0002620;3.56e-10;23!CL:0002334;1.16e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.73e-26,76;CL:0000680,3.57e-20,58;CL:0000056,3.57e-20,58;CL:0000355,3.57e-20,58;CL:0000393,6.77e-20,61;CL:0000211,6.77e-20,61;CL:0000187,5.55e-19,55;CL:0000192,2.06e-17,43;CL:0000514,2.06e-17,43;CL:0000359,2.58e-13,32;CL:0002620,3.69e-10,23;CL:0000048,4.57e-08,427;CL:0000723,1.14e-07,433;CL:0002334,1.16e-07,12;CL:0000222,2.37e-07,121;CL:0000034,2.72e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;9.97e-13;43!CL:0000355;1.15e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.92e-21!365;UBERON:0000914!6.60e-20!83;UBERON:0002329!6.60e-20!83;UBERON:0003077!6.60e-20!83;UBERON:0003059!6.60e-20!83;UBERON:0007282!6.60e-20!83;UBERON:0009618!6.60e-20!83;UBERON:0007285!6.60e-20!83;UBERON:0004290!1.71e-19!70;UBERON:0000119!3.79e-19!312;UBERON:0000483!6.32e-18!309;UBERON:0001134!1.43e-17!61;UBERON:0002036!1.43e-17!61;UBERON:0003082!1.43e-17!61;UBERON:0001017!1.86e-17!82;UBERON:0002385!3.69e-17!63;UBERON:0001015!3.69e-17!63;UBERON:0000383!3.69e-17!63;UBERON:0000468!5.64e-17!659;UBERON:0000073!8.61e-17!94;UBERON:0001016!8.61e-17!94;UBERON:0000477!3.72e-16!286;UBERON:0000486!7.41e-16!82;UBERON:0005743!8.97e-16!86;UBERON:0001049!9.51e-15!57;UBERON:0005068!9.51e-15!57;UBERON:0006241!9.51e-15!57;UBERON:0007135!9.51e-15!57;UBERON:0002616!1.01e-14!59;UBERON:0000481!4.08e-14!347;UBERON:0000955!7.29e-14!69;UBERON:0006238!7.29e-14!69;UBERON:0000025!1.16e-13!194;UBERON:0000467!1.75e-13!625;UBERON:0000480!3.13e-13!626;UBERON:0004111!4.17e-13!241;UBERON:0003075!1.12e-12!86;UBERON:0007284!1.12e-12!86;UBERON:0002346!1.46e-12!90;UBERON:0000924!1.97e-12!173;UBERON:0006601!1.97e-12!173;UBERON:0004121!2.23e-12!169;UBERON:0002049!5.15e-12!79;UBERON:0007798!5.15e-12!79;UBERON:0001637!1.99e-11!42;UBERON:0003509!1.99e-11!42;UBERON:0004572!1.99e-11!42;UBERON:0000033!2.51e-11!123;UBERON:0002780!4.74e-11!41;UBERON:0001890!4.74e-11!41;UBERON:0006240!4.74e-11!41;UBERON:0004872!4.93e-11!84;UBERON:0003080!9.22e-11!42;UBERON:0001893!1.65e-10!34;UBERON:0002020!1.76e-10!34;UBERON:0003528!1.76e-10!34;UBERON:0001981!1.85e-10!60;UBERON:0007500!1.85e-10!60;UBERON:0004537!1.85e-10!60;UBERON:0006965!1.85e-10!60;UBERON:0000153!2.21e-10!129;UBERON:0007811!2.21e-10!129;UBERON:0002791!2.87e-10!33;UBERON:0004573!3.28e-10!33;UBERON:0004571!3.28e-10!33;UBERON:0000922!6.44e-10!612;UBERON:0001869!6.70e-10!32;UBERON:0000055!9.67e-10!69;UBERON:0002050!1.31e-09!605;UBERON:0005423!1.31e-09!605;UBERON:0000923!1.38e-09!604;UBERON:0005291!1.38e-09!604;UBERON:0006598!1.38e-09!604;UBERON:0002532!1.38e-09!604;UBERON:0003056!2.29e-09!61;UBERON:0005256!2.58e-09!143;UBERON:0000956!2.90e-08!25;UBERON:0000203!2.90e-08!25;UBERON:0002619!3.57e-08!22;UBERON:0004535!6.09e-08!110;UBERON:0001009!7.24e-08!113;UBERON:0002199!7.61e-08!45;UBERON:0002416!7.61e-08!45;UBERON:0000490!9.74e-08!138;UBERON:0003102!1.23e-07!95;UBERON:0000479!2.08e-07!787;UBERON:0001950!2.12e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.02e-09;34!UBERON:0002020;1.02e-09;34!UBERON:0001893;1.16e-09;34!UBERON:0001869;1.55e-09;32!UBERON:0002791;1.62e-09;32!UBERON:0004573;5.61e-09;33!UBERON:0004571;5.61e-09;33!UBERON:0002780;5.84e-09;41!UBERON:0001890;5.84e-09;41!UBERON:0000073;7.23e-09;53!UBERON:0002616;7.23e-09;53!UBERON:0000956;9.28e-09;25!UBERON:0000203;9.28e-09;25!UBERON:0002619;1.11e-08;22!UBERON:0001017;3.89e-08;75!UBERON:0001950;7.77e-08;20!UBERON:0001637;8.81e-08;42!UBERON:0003509;8.81e-08;42!UBERON:0004572;8.81e-08;42!UBERON:0001016;2.03e-07;83!UBERON:0000955;3.06e-07;68!UBERON:0002385;8.93e-07;31!UBERON:0001015;8.93e-07;31!UBERON:0000383;8.93e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.26e-21,73;UBERON:0003077,6.50e-21,72;UBERON:0007285,6.50e-21,72;UBERON:0002329,1.51e-20,71;UBERON:0003059,1.51e-20,71;UBERON:0007282,1.51e-20,71;UBERON:0004290,1.51e-20,71;UBERON:0009618,1.51e-20,71;UBERON:0001016,1.17e-19,89;UBERON:0001017,2.78e-19,81;UBERON:0010314,3.08e-19,132;UBERON:0001134,1.86e-18,62;UBERON:0002036,1.86e-18,62;UBERON:0003082,1.86e-18,62;UBERON:0007503,3.24e-18,78;UBERON:0002385,4.95e-18,64;UBERON:0001015,4.95e-18,64;UBERON:0000383,4.95e-18,64;UBERON:0000119,1.50e-16,309;UBERON:0001049,3.70e-16,56;UBERON:0005068,3.70e-16,56;UBERON:0006241,3.70e-16,56;UBERON:0007135,3.70e-16,56;UBERON:0000486,6.19e-16,83;UBERON:0000483,2.28e-15,306;UBERON:0000955,2.30e-15,68;UBERON:0006238,2.30e-15,68;UBERON:0000073,1.03e-14,53;UBERON:0002616,1.03e-14,53;UBERON:0003075,1.17e-14,82;UBERON:0007284,1.17e-14,82;UBERON:0002346,1.37e-14,86;UBERON:0004121,1.31e-12,171;UBERON:0000924,1.31e-12,171;UBERON:0006601,1.31e-12,171;UBERON:0002780,7.83e-12,41;UBERON:0001890,7.83e-12,41;UBERON:0003080,7.83e-12,41;UBERON:0006240,7.83e-12,41;UBERON:0001893,3.03e-11,34;UBERON:0003528,3.23e-11,34;UBERON:0002020,3.23e-11,34;UBERON:0000025,3.83e-11,192;UBERON:0001637,3.92e-11,42;UBERON:0003509,3.92e-11,42;UBERON:0004572,3.92e-11,42;UBERON:0001869,1.38e-10,32;UBERON:0002791,1.48e-10,32;UBERON:0000923,2.24e-10,560;UBERON:0010316,2.24e-10,560;UBERON:0005291,2.24e-10,560;UBERON:0006598,2.24e-10,560;UBERON:0010317,2.24e-10,560;UBERON:0002532,2.24e-10,560;UBERON:0010371,2.47e-10,104;UBERON:0004573,4.43e-10,33;UBERON:0004571,4.43e-10,33;UBERON:0002050,4.71e-10,564;UBERON:0005256,6.59e-10,122;UBERON:0000479,7.12e-10,773;UBERON:0003056,1.08e-09,61;UBERON:0004111,2.28e-09,240;UBERON:0002049,3.32e-09,78;UBERON:0007798,3.32e-09,78;UBERON:0004872,3.69e-09,83;UBERON:0000956,8.12e-09,25;UBERON:0000203,8.12e-09,25;UBERON:0000490,8.14e-09,148;UBERON:0007500,8.48e-09,59;UBERON:0001981,8.48e-09,59;UBERON:0004537,8.48e-09,59;UBERON:0006965,8.48e-09,59;UBERON:0002619,1.01e-08,22;UBERON:0002199,2.57e-08,46;UBERON:0002416,2.57e-08,46;UBERON:0003104,5.26e-08,160;UBERON:0009142,5.26e-08,160;UBERON:0005423,5.64e-08,581;UBERON:0001950,6.96e-08,20;UBERON:0000922,1.26e-07,592;UBERON:0000055,1.85e-07,68;UBERON:0011216,2.21e-07,223 | |||
|phase1_expression=14.5342703416445,8.99222200342129,18.8878901488601,5.00366491765652,6.25745532198203,4.36169262050184,10.1319951267324,22.7419154433659,28.7304191019822,3.19454117451962,0.697801167972428,0.218441372130172,0,3.09415882400117,2.65117900582333,3.36162573225888,8.43772339233568,5.84248072309899,6.8310591830671,4.062994916534,7.95602695852587,4.07491137921514,6.01095572975219,2.87436292653057,4.6450776650077,0.0764134057479513,0.246301768349837,0,0.786728553697808,0,1.39334510984468,0,0.6024118375565,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,2.81297636055767,17.7105184668437,48.1284394210454,11.7325680358267,32.6067238290951,11.1926020169606,0.189069634328136,1.10864698731282,0.966182642624386,6.28699562389021,0.364295288292542,0,0,0,1.06366368415092,0,0,0,1.39133685156694,2.58070378531837,1.38856200643038,6.21838736116411,2.51699661725944,0.550236083880135,2.08994966536811,0.775250277507987,1.42306505074684,1.00416183829401,0,2.28081631715554,0.488124115096339,1.83831540172934,0.81014194788176,1.07159673940896,0.44905874525234,0.675668882899933,7.66583187329416,4.74632829784064,4.03043836646896,0,0,0,5.96366342034382,11.5233765614768,54.8174008566726,27.5363155918861,17.3787507277195,5.04609840128076,17.0798393167528,11.3467072271894,7.46906484959439,3.23305612967251,2.7788523529288,12.1085942115945,13.25204626304,18.7457145467037,40.2686499111113,34.7987811142114,34.0742991658106,1.29177948508141,3.39933183173076,4.77532742787645,102.485393969956,22.3558457507418,48.3564655902582,8.31602000097437,5.19260551484969,34.586131753645,18.6840716872222,21.0420142442583,8.75829639103749,93.3706069181696,3.07284334616587,3.67785354958824,5.85928429735728,4.8775838758809,9.50765069150968,16.0168041613926,27.551147150743,19.8060123415706,16.3853521489118,21.6418053638328,15.447699075522,24.6413445072249,11.2052555935378,20.1947019395292,28.4434186804705,13.5782687727802,20.5905563659636,7.45565526884538,14.9213321233229,0.193260853163297,0.545492241181669,0,1.34171076742555,1.06023814657188,1.04574548582567,1.86589899027667,1.7662459561294,1.45990943630332,1.56449532329816,7.71889125831462,11.0507937081984,5.57241513638375,8.66255378003503,2.36613600079688,2.86593973132773,2.6511213287183,2.42646740011267,2.61455332910887,2.60997681022206,1.61797569792197,1.76599318612811,1.53898862778556,0.738155454624648,2.80483547606892,5.7620361586396,7.3504355692771,0,0,0.590789906681404,0,0,6.17644117074692,0.439001141634502,0,0,0.0925884451585296,35.1872969735151,20.7986957055916,7.21656710126366,0,20.429112797033,0.721832238805369,0.462985512576611,0.761016608938393,0,0,1.72351904261178,1.40402559083543,0.297262324577456,0,1.00789276919316,0.141775097242386,0,0,0.383382679165211,13.7945706610864,42.1751998923353,46.0268416500514,41.218306677251,42.4174576312637,1.33345578013555,0.381988425558278,0,1.71072446022705,1.85089486865982,0,1.42913216315289,35.5455537374793,38.8004461261619,23.1015600335993,16.1589644697222,0,3.381211010224,18.0837919277712,2.08014873822732,18.0045161983499,7.09245660116391,20.7809299632558,2.85955987316295,13.5655401347861,12.3486050517115,4.88604276440603,1.77695974371273,6.33561498346743,1.80863626235752,2.61460037580088,0.899756920638513,0,1.00451418286425,0,21.0869872832593,0,21.3955357561078,15.7811624267661,23.8352534158445,7.52056045607561,0,0,0,0,59.204047443834,66.3713254673871,21.6520867577755,20.9395331667936,19.7761013012481,0,0,0,2.82190430954022,3.50119364741774,12.2069260664881,1.24782516918484,1.96271887676878,1.10391690523754,0.819989904948992,24.3766340779452,9.09630016223939,6.2083842775503,16.6056399633859,15.3026409889614,19.5488132553186,8.02784745597236,6.51972505240626,0,0,0,0,1.66435439510497,2.11673205330776,23.322133934965,47.2662877727232,12.9103643439214,23.0650468660262,13.816095724801,30.8839528595726,7.42090332224955,26.5240673340568,20.2420366856965,25.2951640522532,39.9825910471388,17.4315567689939,0,1.40354529212299,0,22.7332607365921,27.1315840330008,11.1455752715511,0.451199612907412,0.693138033939733,0.784349769176855,0,0.73886140225013,0,0.170093705276516,3.67057057373637,0,7.58650025122788,4.01351819083883,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.309123034943167,0.183138929636687,0.082509499920588,1.72279661398852,0.650060246036521,8.03419649220798,21.364228742559,5.39170159901255,3.53058451870098,3.99726060205139,4.40423003959922,5.075584286998,5.96586391912706,14.7793179173584,0.495854746082934,0,2.29702882490251,0.2023155617111,14.8750575775131,62.6476570192974,52.277795262045,25.5667871546154,33.0029738796554,65.2449744056305,18.3470976912881,6.15437012990562,4.83805880167568,21.5138008808734,5.71890581771475,41.9672377750588,12.8381696410176,28.9564955612602,10.9892809627892,9.17349533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| |||
|short_description=p2@NAV1 | |||
}} |
Latest revision as of 18:33, 19 September 2015
Short description: | p2@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | 334bp_to_ENST00000295624, ENST00000367297, ENST00000367300, ENST00000391966, NM_020443, uc001gwu.2_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | A8MYI2Q8NEY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.73e-26 | 76 |
muscle precursor cell | 3.57e-20 | 58 |
myoblast | 3.57e-20 | 58 |
multi-potent skeletal muscle stem cell | 3.57e-20 | 58 |
electrically responsive cell | 6.77e-20 | 61 |
electrically active cell | 6.77e-20 | 61 |
muscle cell | 5.55e-19 | 55 |
smooth muscle cell | 2.06e-17 | 43 |
smooth muscle myoblast | 2.06e-17 | 43 |
vascular associated smooth muscle cell | 2.58e-13 | 32 |
skin fibroblast | 3.69e-10 | 23 |
multi fate stem cell | 4.57e-08 | 427 |
somatic stem cell | 1.14e-07 | 433 |
preadipocyte | 1.16e-07 | 12 |
mesodermal cell | 2.37e-07 | 121 |
stem cell | 2.72e-07 | 441 |