FFCP PHASE1:Hg19::chr3:11675592..11675625,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-447bp_to_ENST00000480288_5end | |||
|cluster_id=chr3:11675592..11675625,- | |||
|description=CAGE_peak_24_at_VGLL4_5end | |||
|id=chr3:11675592..11675625,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.08e-21;1!UBERON:0004874;5.16e-21;1!UBERON:0003056;6.78e-08;3 | |||
|ontology_enrichment_disease=DOID:114!6.84e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.67e-40;2!DOID:0050619;1.53e-21;1!DOID:1357;1.53e-21;1!DOID:178;5.16e-21;1!DOID:326;5.16e-21;1!DOID:3978;5.16e-21;1!DOID:3394;5.16e-21;1!DOID:5844;5.16e-21;1!DOID:1287;1.15e-20;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.49e-40,2;DOID:0050619,1.53e-21,1;DOID:1357,1.53e-21,1;DOID:178,5.16e-21,1;DOID:326,5.16e-21,1;DOID:3978,5.16e-21,1;DOID:3394,5.16e-21,1;DOID:5844,5.16e-21,1;DOID:1287,1.28e-20,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.84e-35!115;UBERON:0000988!5.01e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.53e-21;1!UBERON:0001825;1.53e-21;1!UBERON:0002363;2.08e-21;1!UBERON:0000989;5.16e-21;1!UBERON:0002135;5.16e-21;1!UBERON:0008811;5.16e-21;1!UBERON:0002360;2.12e-11;2!UBERON:0000094;2.12e-11;2!UBERON:0010743;2.12e-11;2!UBERON:0002133;3.34e-11;2!UBERON:0003978;6.78e-08;3!UBERON:0000946;6.78e-08;3!UBERON:0003124;6.78e-08;3!UBERON:0000920;6.78e-08;3!UBERON:0007100;9.68e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.53e-21,1;UBERON:0001825,1.53e-21,1;UBERON:0002363,1.88e-21,1;UBERON:0007645,1.88e-21,1;UBERON:0007647,1.88e-21,1;UBERON:0010115,1.88e-21,1;UBERON:0000989,2.82e-21,1;UBERON:0008811,2.82e-21,1;UBERON:0006258,2.82e-21,1;UBERON:0005876,2.82e-21,1;UBERON:0004874,2.82e-21,1;UBERON:0002135,3.45e-21,1;UBERON:0002360,2.02e-11,2;UBERON:0000094,2.02e-11,2;UBERON:0010743,2.02e-11,2;UBERON:0002133,2.73e-11,2;UBERON:0007023,2.84e-08,114;UBERON:0003978,5.93e-08,3;UBERON:0009751,5.93e-08,3;UBERON:0000946,5.93e-08,3;UBERON:0002523,5.93e-08,3;UBERON:0005983,5.93e-08,3;UBERON:0002165,5.93e-08,3;UBERON:0002062,5.93e-08,3;UBERON:0007280,5.93e-08,3;UBERON:0000920,8.29e-08,3;UBERON:0007100,3.23e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.445641827540694,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0.535081656179426,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,2.46427660551103,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.229160424011684,0,1.39775300349294,1.28767814440971,0.446342914883745,0.604651252380536,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0.394028536495991,0.524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,1.9221734262185,0.471612915298998,0.828478110694391,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,5.33983927250797,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,1.98484471355718,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,1.07214816264985,0.158013611732727,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0.45178432815584,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.375935671919414,0.515663103788617,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0,0,0,0,0,0,0.12729431655633,0,0,0.684466602170562,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p24@VGLL4 | |||
}} |
Latest revision as of 18:33, 19 September 2015
Short description: | p24@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | -447bp_to_ENST00000480288_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.53e-21 | 1 |
paranasal sinus | 1.53e-21 | 1 |
dura mater | 1.88e-21 | 1 |
future meninx | 1.88e-21 | 1 |
ectomeninx | 1.88e-21 | 1 |
future dura mater | 1.88e-21 | 1 |
penis | 2.82e-21 | 1 |
intromittent organ | 2.82e-21 | 1 |
lateral plate mesenchyme | 2.82e-21 | 1 |
undifferentiated genital tubercle | 2.82e-21 | 1 |
somatopleure | 2.82e-21 | 1 |
mitral valve | 3.45e-21 | 1 |
meninx | 2.02e-11 | 2 |
membrane organ | 2.02e-11 | 2 |
meningeal cluster | 2.02e-11 | 2 |
atrioventricular valve | 2.73e-11 | 2 |
adult organism | 2.84e-08 | 114 |
valve | 5.93e-08 | 3 |
cardiac mesenchyme | 5.93e-08 | 3 |
cardial valve | 5.93e-08 | 3 |
tunica intima | 5.93e-08 | 3 |
heart layer | 5.93e-08 | 3 |
endocardium | 5.93e-08 | 3 |
endocardial cushion | 5.93e-08 | 3 |
presumptive endocardium | 5.93e-08 | 3 |
egg chorion | 8.29e-08 | 3 |
primary circulatory organ | 3.23e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.49e-40 | 2 |
paranasal sinus cancer | 1.53e-21 | 1 |
maxillary sinus cancer | 1.53e-21 | 1 |
vascular disease | 5.16e-21 | 1 |
ischemia | 5.16e-21 | 1 |
extrinsic cardiomyopathy | 5.16e-21 | 1 |
myocardial ischemia | 5.16e-21 | 1 |
myocardial infarction | 5.16e-21 | 1 |
cardiovascular system disease | 1.28e-20 | 4 |