FFCP PHASE1:Hg19::chr7:81635124..81635130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=781 | |EntrezGene=781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1399 | |HGNC=1399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000443883_5end | |association_with_transcript=-18bp_to_ENST00000443883_5end | ||
|cluster_id=chr7:81635124..81635130,- | |||
|description=CAGE_peak_18_at_CACNA2D1_5end | |description=CAGE_peak_18_at_CACNA2D1_5end | ||
|id=chr7:81635124..81635130,- | |id=chr7:81635124..81635130,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;6.30e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.18e-26,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.11e-07!14 | |ontology_enrichment_disease=DOID:2394!3.11e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:154;6.30e-26;2!DOID:4236;6.30e-26;2!DOID:4362;3.10e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:154,5.56e-26,2;DOID:4236,5.56e-26,2;DOID:4362,3.60e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002791!2.68e-07!33;UBERON:0002020!4.90e-07!34;UBERON:0003528!4.90e-07!34;UBERON:0001893!5.45e-07!34 | |ontology_enrichment_uberon=UBERON:0002791!2.68e-07!33;UBERON:0002020!4.90e-07!34;UBERON:0003528!4.90e-07!34;UBERON:0001893!5.45e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;6.30e-26;2!UBERON:0006955;6.30e-26;2!UBERON:0004801;6.30e-26;2!UBERON:0001872;3.10e-11;5!UBERON:0001950;1.69e-10;20!UBERON:0002619;1.12e-09;22!UBERON:0000002;1.38e-09;6!UBERON:0000200;1.38e-09;6!UBERON:0001560;1.38e-09;6!UBERON:0000956;1.11e-08;25!UBERON:0000203;1.11e-08;25!UBERON:0001871;2.11e-08;6!UBERON:0001893;3.58e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,4.32e-26,2;UBERON:0006955,9.18e-26,2;UBERON:0004801,9.18e-26,2;UBERON:0001872,3.26e-11,5;UBERON:0001950,1.61e-10,20;UBERON:0002619,1.07e-09,22;UBERON:0000200,1.22e-09,6;UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6;UBERON:0000956,1.07e-08,25;UBERON:0000203,1.07e-08,25;UBERON:0001871,1.89e-08,6;UBERON:0002791,4.60e-07,32;UBERON:0001869,4.60e-07,32 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.633152558322899,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0.116210378459959,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,1.38899995946634,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0.19980960958213,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,1.70836770862748,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0.28984205722165,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0,0,0,0.414706207840855,0.53168342911599,0,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0.192687675289379,0,0,0,0.504143392443436,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,1.09394961803644,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.471346769748006,0,0.913158720509496,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0.647428837187895,0.102662806856247,0,0,0,0.198950775161368,0.237840181555137,0,0,0.150962843566674,0,0.218559560503957,0.470317296361523,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p18@CACNA2D1 | |short_description=p18@CACNA2D1 | ||
}} | }} |
Latest revision as of 18:17, 19 September 2015
Short description: | p18@CACNA2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CACNA2D1_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000443883_5end |
EntrezGene: | CACNA2D1 |
HGNC: | 1399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.18e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 4.32e-26 | 2 |
uterine epithelium | 9.18e-26 | 2 |
cervix epithelium | 9.18e-26 | 2 |
parietal lobe | 3.26e-11 | 5 |
neocortex | 1.61e-10 | 20 |
regional part of cerebral cortex | 1.07e-09 | 22 |
gyrus | 1.22e-09 | 6 |
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
cerebral cortex | 1.07e-08 | 25 |
pallium | 1.07e-08 | 25 |
temporal lobe | 1.89e-08 | 6 |
regional part of telencephalon | 4.60e-07 | 32 |
cerebral hemisphere | 4.60e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 5.56e-26 | 2 |
carcinosarcoma | 5.56e-26 | 2 |
cervical cancer | 3.60e-11 | 5 |