FFCP PHASE1:Hg19::chr18:47792829..47792849,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:47792829..47792849,-
|short_description=p2@CCDC11
|description=CAGE_peak_2_at_CCDC11_5end
|association_with_transcript=15bp_to_ENST00000398545,NM_145020,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=220136 | |EntrezGene=220136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26530 | |HGNC=26530 | ||
|TSSclassifier=strong | |||
|UniProt=Q96M91 | |UniProt=Q96M91 | ||
|association_with_transcript=15bp_to_ENST00000398545,NM_145020,uc002lee.2_5end | |||
|cluster_id=chr18:47792829..47792849,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_CCDC11_5end | |||
|id=chr18:47792829..47792849,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.15e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.68e-11!57;UBERON:0005068!3.68e-11!57;UBERON:0006241!3.68e-11!57;UBERON:0007135!3.68e-11!57;UBERON:0007023!7.56e-11!115;UBERON:0002616!1.51e-09!59;UBERON:0003075!8.32e-09!86;UBERON:0007284!8.32e-09!86;UBERON:0002780!5.48e-08!41;UBERON:0001890!5.48e-08!41;UBERON:0006240!5.48e-08!41;UBERON:0000955!5.77e-08!69;UBERON:0006238!5.77e-08!69;UBERON:0002346!6.10e-08!90;UBERON:0003080!1.20e-07!42;UBERON:0002308!3.13e-07!9;UBERON:0000125!3.13e-07!9;UBERON:0002298!8.19e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;1.40e-19;2!UBERON:0000122;1.40e-19;2!UBERON:0001896;9.29e-14;3!UBERON:0005290;9.29e-14;3!UBERON:0004732;7.27e-12;13!UBERON:0001301;5.84e-11;1!UBERON:0002336;1.15e-10;1!UBERON:0000941;1.15e-10;1!UBERON:0001785;1.15e-10;1!UBERON:0002464;1.15e-10;1!UBERON:0004904;1.15e-10;1!UBERON:0011215;1.15e-10;1!UBERON:0001018;1.15e-10;1!UBERON:0001021;1.15e-10;1!UBERON:0002473;1.15e-10;1!UBERON:0005340;1.15e-10;1!UBERON:0003544;1.15e-10;1!UBERON:0005970;1.15e-10;1!UBERON:0002316;1.15e-10;1!UBERON:0001020;1.15e-10;1!UBERON:0002437;1.15e-10;1!UBERON:0003135;1.35e-08;11!UBERON:0004733;1.11e-07;12!UBERON:0002028;1.11e-07;12!UBERON:0002298;2.57e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,2.06e-19,2;UBERON:0000122,2.06e-19,2;UBERON:0001896,6.96e-14,3;UBERON:0005290,6.96e-14,3;UBERON:0010096,6.96e-14,3;UBERON:0004732,6.40e-12,13;UBERON:0001301,5.05e-11,1;UBERON:0000941,1.21e-10,1;UBERON:0001785,1.21e-10,1;UBERON:0002464,1.21e-10,1;UBERON:0004904,1.21e-10,1;UBERON:0001021,1.21e-10,1;UBERON:0003902,1.21e-10,1;UBERON:0005425,1.21e-10,1;UBERON:0002336,1.61e-10,1;UBERON:0011215,1.61e-10,1;UBERON:0001018,1.61e-10,1;UBERON:0002473,1.61e-10,1;UBERON:0005340,1.61e-10,1;UBERON:0003544,1.61e-10,1;UBERON:0005970,1.61e-10,1;UBERON:0002316,1.61e-10,1;UBERON:0001020,1.61e-10,1;UBERON:0002437,1.61e-10,1;UBERON:0007023,3.70e-10,114;UBERON:0003135,1.30e-08,11;UBERON:0004733,9.86e-08,12;UBERON:0002028,9.86e-08,12;UBERON:0007277,9.86e-08,12;UBERON:0002298,2.23e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.527533956456907,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,1.75996244461323,0,0.889509253863555,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0,0,3.66741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0,0.554128230968366,0.438977620880838,0.30648779579902,0,0,0.358779271377724,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,2.0694614258501,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0,0,0,0.355123450626254,0,0,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,1.56869953835371,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0.656029291399411,0,0.206082023295445,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0.322260734604821,0.290033387828457,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0.307160702099232,0,0,0,0,0,0.597743964753209,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0,0,0,0,0,3.54296554325536,0.723578631752448,1.52581736317083,0,0,0.658156191461918,0.10893846351899,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07841812769083,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0,0.353024506766001,0.225980740780532,0,0,0.189932387867636,0,0,0,0.39961921916426,0,0.114536596165916,0,0,0.124252535565433,0,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,1.32506888912221,0.904980694530854,0.66116300871345,0,2.11444506695002,1.81538601365081,3.61569901729232,0.828478110694391,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0.244052529803926,0,4.58727356552057,1.99672292766334,0.745156835296601,0,0,0,0.570930667089935,0,0,0.144921028610825,0,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0.310525913752519,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.857766365499703,0.782982875895635,0,0,0,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,0.256916900385838,0,0.159633859057151,0,0.504143392443436,0.138314504928436,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.902523940191087,0.40341013740704,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0.682986574053893,0.177404740325278,0.115233987555779,0,0.135939465953663,0,0,0.111231401892069,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,11.6699195256089,10.450601076091,0,0.620597975171371,0.639701945702943,2.3806443146374,0.0645889098360061,0,0,0.190941474834495,0.606351566874658,0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| ||
|short_description=p2@CCDC11 | |||
}} | }} |
Latest revision as of 18:14, 19 September 2015
Short description: | p2@CCDC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC11_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 15bp_to_ENST00000398545, NM_145020, uc002lee.2_5end |
EntrezGene: | CCDC11 |
HGNC: | 26530 |
UniProt: | Q96M91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 2.06e-19 | 2 |
neuron projection bundle | 2.06e-19 | 2 |
medulla oblongata | 6.96e-14 | 3 |
myelencephalon | 6.96e-14 | 3 |
future myelencephalon | 6.96e-14 | 3 |
segmental subdivision of nervous system | 6.40e-12 | 13 |
epididymis | 5.05e-11 | 1 |
cranial nerve II | 1.21e-10 | 1 |
cranial nerve | 1.21e-10 | 1 |
nerve trunk | 1.21e-10 | 1 |
nerve connecting eye with brain | 1.21e-10 | 1 |
nerve | 1.21e-10 | 1 |
retinal neural layer | 1.21e-10 | 1 |
presumptive neural retina | 1.21e-10 | 1 |
corpus callosum | 1.61e-10 | 1 |
central nervous system cell part cluster | 1.61e-10 | 1 |
axon tract | 1.61e-10 | 1 |
intercerebral commissure | 1.61e-10 | 1 |
dorsal telencephalic commissure | 1.61e-10 | 1 |
brain white matter | 1.61e-10 | 1 |
brain commissure | 1.61e-10 | 1 |
white matter | 1.61e-10 | 1 |
nervous system commissure | 1.61e-10 | 1 |
cerebral hemisphere white matter | 1.61e-10 | 1 |
adult organism | 3.70e-10 | 114 |
male reproductive organ | 1.30e-08 | 11 |
segmental subdivision of hindbrain | 9.86e-08 | 12 |
hindbrain | 9.86e-08 | 12 |
presumptive hindbrain | 9.86e-08 | 12 |
brainstem | 2.23e-07 | 6 |