FFCP PHASE1:Hg19::chr3:115528904..115528924,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=6705 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 18:09, 19 September 2015
Short description: | p5@LSAMP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LSAMP_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -445bp_to_AK094535_5end |
EntrezGene: | LSAMP |
HGNC: | 6705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@LSAMP |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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regional part of cerebral cortex | 9.40e-57 | 22 |
neocortex | 1.17e-51 | 20 |
brain grey matter | 1.26e-51 | 34 |
gray matter | 1.26e-51 | 34 |
cerebral cortex | 4.66e-50 | 25 |
pallium | 4.66e-50 | 25 |
regional part of telencephalon | 1.53e-46 | 32 |
cerebral hemisphere | 1.53e-46 | 32 |
telencephalon | 8.47e-44 | 34 |
neural tube | 1.31e-41 | 56 |
Showing 1 to 10 of 58 entries
Ontology term | p-value | n |
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mixed cell type cancer | 9.54e-07 | 2 |
carcinosarcoma | 9.54e-07 | 2 |
Showing 1 to 2 of 2 entries