FFCP PHASE1:Hg19::chr7:81399376..81399392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3082 | |EntrezGene=3082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |HGNC=4893 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000457544_5end | |association_with_transcript=-12bp_to_ENST00000457544_5end | ||
|cluster_id=chr7:81399376..81399392,- | |||
|coexpression_cluster_id=C2904 | |coexpression_cluster_id=C2904 | ||
|description=CAGE_peak_5_at_HGF_5end | |description=CAGE_peak_5_at_HGF_5end | ||
|id=chr7:81399376..81399392,- | |id=chr7:81399376..81399392,- | ||
|ontology_enrichment_celltype=CL:0000055!1.01e-15!180;CL:0000187!1.12e-15!54;CL:0000183!1.14e-15!59;CL:0000680!1.44e-15!57;CL:0000056!1.44e-15!57;CL:0000355!1.44e-15!57;CL:0000393!1.97e-14!60;CL:0000211!1.97e-14!60;CL:0000057!1.67e-11!75;CL:0000192!2.79e-11!42;CL:0000514!2.79e-11!42;CL:0000048!1.17e-08!430;CL:0000723!8.52e-08!436;CL:0000034!9.29e-08!444 | |ontology_enrichment_celltype=CL:0000055!1.01e-15!180;CL:0000187!1.12e-15!54;CL:0000183!1.14e-15!59;CL:0000680!1.44e-15!57;CL:0000056!1.44e-15!57;CL:0000355!1.44e-15!57;CL:0000393!1.97e-14!60;CL:0000211!1.97e-14!60;CL:0000057!1.67e-11!75;CL:0000192!2.79e-11!42;CL:0000514!2.79e-11!42;CL:0000048!1.17e-08!430;CL:0000723!8.52e-08!436;CL:0000034!9.29e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.37e-11;55!CL:0000393;1.41e-10;61!CL:0000211;1.41e-10;61!CL:0000192;2.69e-10;43!CL:0002494;2.26e-09;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.99e-20,58;CL:0000056,2.99e-20,58;CL:0000355,2.99e-20,58;CL:0000187,4.68e-20,55;CL:0000393,1.25e-17,61;CL:0000211,1.25e-17,61;CL:0000192,1.71e-13,43;CL:0000514,1.71e-13,43;CL:0000057,2.30e-12,76;CL:0000048,1.42e-09,427;CL:0002494,1.80e-09,16;CL:0000723,5.60e-09,433;CL:0000034,7.00e-09,441;CL:0000359,8.86e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;1.08e-11;58!CL:0000514;2.69e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.68e-18!83;UBERON:0002329!4.68e-18!83;UBERON:0003077!4.68e-18!83;UBERON:0003059!4.68e-18!83;UBERON:0007282!4.68e-18!83;UBERON:0009618!4.68e-18!83;UBERON:0007285!4.68e-18!83;UBERON:0002385!4.97e-16!63;UBERON:0001015!4.97e-16!63;UBERON:0000383!4.97e-16!63;UBERON:0004290!1.16e-15!70;UBERON:0001134!1.61e-15!61;UBERON:0002036!1.61e-15!61;UBERON:0003082!1.61e-15!61;UBERON:0005256!8.12e-12!143;UBERON:0002204!3.09e-11!167;UBERON:0000486!8.23e-11!82;UBERON:0000481!1.13e-09!347;UBERON:0000468!3.89e-09!659;UBERON:0000479!1.80e-08!787;UBERON:0007023!1.95e-08!115;UBERON:0000948!2.85e-08!24;UBERON:0005498!2.85e-08!24;UBERON:0004140!2.85e-08!24;UBERON:0009881!2.85e-08!24;UBERON:0004141!2.85e-08!24;UBERON:0003084!2.85e-08!24;UBERON:0007005!2.85e-08!24;UBERON:0004139!2.85e-08!24;UBERON:0004291!2.85e-08!24;UBERON:0007100!3.33e-08!27;UBERON:0004872!3.57e-08!84;UBERON:0000467!1.39e-07!625;UBERON:0001009!1.42e-07!113;UBERON:0002050!1.88e-07!605;UBERON:0005423!1.88e-07!605;UBERON:0000480!1.90e-07!626;UBERON:0000922!1.99e-07!612;UBERON:0004535!2.20e-07!110;UBERON:0000926!3.00e-07!448;UBERON:0004120!3.00e-07!448;UBERON:0006603!3.00e-07!448;UBERON:0000923!3.41e-07!604;UBERON:0005291!3.41e-07!604;UBERON:0006598!3.41e-07!604;UBERON:0002532!3.41e-07!604;UBERON:0000477!4.20e-07!286 | |ontology_enrichment_uberon=UBERON:0000914!4.68e-18!83;UBERON:0002329!4.68e-18!83;UBERON:0003077!4.68e-18!83;UBERON:0003059!4.68e-18!83;UBERON:0007282!4.68e-18!83;UBERON:0009618!4.68e-18!83;UBERON:0007285!4.68e-18!83;UBERON:0002385!4.97e-16!63;UBERON:0001015!4.97e-16!63;UBERON:0000383!4.97e-16!63;UBERON:0004290!1.16e-15!70;UBERON:0001134!1.61e-15!61;UBERON:0002036!1.61e-15!61;UBERON:0003082!1.61e-15!61;UBERON:0005256!8.12e-12!143;UBERON:0002204!3.09e-11!167;UBERON:0000486!8.23e-11!82;UBERON:0000481!1.13e-09!347;UBERON:0000468!3.89e-09!659;UBERON:0000479!1.80e-08!787;UBERON:0007023!1.95e-08!115;UBERON:0000948!2.85e-08!24;UBERON:0005498!2.85e-08!24;UBERON:0004140!2.85e-08!24;UBERON:0009881!2.85e-08!24;UBERON:0004141!2.85e-08!24;UBERON:0003084!2.85e-08!24;UBERON:0007005!2.85e-08!24;UBERON:0004139!2.85e-08!24;UBERON:0004291!2.85e-08!24;UBERON:0007100!3.33e-08!27;UBERON:0004872!3.57e-08!84;UBERON:0000467!1.39e-07!625;UBERON:0001009!1.42e-07!113;UBERON:0002050!1.88e-07!605;UBERON:0005423!1.88e-07!605;UBERON:0000480!1.90e-07!626;UBERON:0000922!1.99e-07!612;UBERON:0004535!2.20e-07!110;UBERON:0000926!3.00e-07!448;UBERON:0004120!3.00e-07!448;UBERON:0006603!3.00e-07!448;UBERON:0000923!3.41e-07!604;UBERON:0005291!3.41e-07!604;UBERON:0006598!3.41e-07!604;UBERON:0002532!3.41e-07!604;UBERON:0000477!4.20e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;3.09e-10;22!UBERON:0007100;2.26e-08;25!UBERON:0002385;3.21e-08;31!UBERON:0001015;3.21e-08;31!UBERON:0000383;3.21e-08;31 | |||
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| ||
|short_description=p5@HGF | |short_description=p5@HGF | ||
}} | }} |
Latest revision as of 18:05, 19 September 2015
Short description: | p5@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HGF_5end |
Coexpression cluster: | C2904_Mesenchymal_adenocarcinoma_Cardiac_small_sacrococcigeal_Preadipocyte_Smooth |
Association with transcript: | -12bp_to_ENST00000457544_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.99e-20 | 58 |
myoblast | 2.99e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.99e-20 | 58 |
muscle cell | 4.68e-20 | 55 |
electrically responsive cell | 1.25e-17 | 61 |
electrically active cell | 1.25e-17 | 61 |
smooth muscle cell | 1.71e-13 | 43 |
smooth muscle myoblast | 1.71e-13 | 43 |
fibroblast | 2.30e-12 | 76 |
multi fate stem cell | 1.42e-09 | 427 |
cardiocyte | 1.80e-09 | 16 |
somatic stem cell | 5.60e-09 | 433 |
stem cell | 7.00e-09 | 441 |
vascular associated smooth muscle cell | 8.86e-07 | 32 |