FFCP PHASE1:Hg19::chr7:81399376..81399392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3082 | |EntrezGene=3082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |HGNC=4893 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000457544_5end | |association_with_transcript=-12bp_to_ENST00000457544_5end | ||
|cluster_id=chr7:81399376..81399392,- | |||
|coexpression_cluster_id=C2904 | |||
|description=CAGE_peak_5_at_HGF_5end | |description=CAGE_peak_5_at_HGF_5end | ||
|id=chr7:81399376..81399392,- | |id=chr7:81399376..81399392,- | ||
|ontology_enrichment_celltype=CL:0000055!1.01e-15!180;CL:0000187!1.12e-15!54;CL:0000183!1.14e-15!59;CL:0000680!1.44e-15!57;CL:0000056!1.44e-15!57;CL:0000355!1.44e-15!57;CL:0000393!1.97e-14!60;CL:0000211!1.97e-14!60;CL:0000057!1.67e-11!75;CL:0000192!2.79e-11!42;CL:0000514!2.79e-11!42;CL:0000048!1.17e-08!430;CL:0000723!8.52e-08!436;CL:0000034!9.29e-08!444 | |ontology_enrichment_celltype=CL:0000055!1.01e-15!180;CL:0000187!1.12e-15!54;CL:0000183!1.14e-15!59;CL:0000680!1.44e-15!57;CL:0000056!1.44e-15!57;CL:0000355!1.44e-15!57;CL:0000393!1.97e-14!60;CL:0000211!1.97e-14!60;CL:0000057!1.67e-11!75;CL:0000192!2.79e-11!42;CL:0000514!2.79e-11!42;CL:0000048!1.17e-08!430;CL:0000723!8.52e-08!436;CL:0000034!9.29e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000187;1.37e-11;55!CL:0000393;1.41e-10;61!CL:0000211;1.41e-10;61!CL:0000192;2.69e-10;43!CL:0002494;2.26e-09;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.99e-20,58;CL:0000056,2.99e-20,58;CL:0000355,2.99e-20,58;CL:0000187,4.68e-20,55;CL:0000393,1.25e-17,61;CL:0000211,1.25e-17,61;CL:0000192,1.71e-13,43;CL:0000514,1.71e-13,43;CL:0000057,2.30e-12,76;CL:0000048,1.42e-09,427;CL:0002494,1.80e-09,16;CL:0000723,5.60e-09,433;CL:0000034,7.00e-09,441;CL:0000359,8.86e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000355;1.08e-11;58!CL:0000514;2.69e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.68e-18!83;UBERON:0002329!4.68e-18!83;UBERON:0003077!4.68e-18!83;UBERON:0003059!4.68e-18!83;UBERON:0007282!4.68e-18!83;UBERON:0009618!4.68e-18!83;UBERON:0007285!4.68e-18!83;UBERON:0002385!4.97e-16!63;UBERON:0001015!4.97e-16!63;UBERON:0000383!4.97e-16!63;UBERON:0004290!1.16e-15!70;UBERON:0001134!1.61e-15!61;UBERON:0002036!1.61e-15!61;UBERON:0003082!1.61e-15!61;UBERON:0005256!8.12e-12!143;UBERON:0002204!3.09e-11!167;UBERON:0000486!8.23e-11!82;UBERON:0000481!1.13e-09!347;UBERON:0000468!3.89e-09!659;UBERON:0000479!1.80e-08!787;UBERON:0007023!1.95e-08!115;UBERON:0000948!2.85e-08!24;UBERON:0005498!2.85e-08!24;UBERON:0004140!2.85e-08!24;UBERON:0009881!2.85e-08!24;UBERON:0004141!2.85e-08!24;UBERON:0003084!2.85e-08!24;UBERON:0007005!2.85e-08!24;UBERON:0004139!2.85e-08!24;UBERON:0004291!2.85e-08!24;UBERON:0007100!3.33e-08!27;UBERON:0004872!3.57e-08!84;UBERON:0000467!1.39e-07!625;UBERON:0001009!1.42e-07!113;UBERON:0002050!1.88e-07!605;UBERON:0005423!1.88e-07!605;UBERON:0000480!1.90e-07!626;UBERON:0000922!1.99e-07!612;UBERON:0004535!2.20e-07!110;UBERON:0000926!3.00e-07!448;UBERON:0004120!3.00e-07!448;UBERON:0006603!3.00e-07!448;UBERON:0000923!3.41e-07!604;UBERON:0005291!3.41e-07!604;UBERON:0006598!3.41e-07!604;UBERON:0002532!3.41e-07!604;UBERON:0000477!4.20e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;3.09e-10;22!UBERON:0007100;2.26e-08;25!UBERON:0002385;3.21e-08;31!UBERON:0001015;3.21e-08;31!UBERON:0000383;3.21e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,4.48e-20,64;UBERON:0001015,4.48e-20,64;UBERON:0000383,4.48e-20,64;UBERON:0007524,5.00e-20,73;UBERON:0001134,5.86e-20,62;UBERON:0002036,5.86e-20,62;UBERON:0003082,5.86e-20,62;UBERON:0002329,8.40e-20,71;UBERON:0003059,8.40e-20,71;UBERON:0007282,8.40e-20,71;UBERON:0004290,8.40e-20,71;UBERON:0009618,8.40e-20,71;UBERON:0003077,2.65e-19,72;UBERON:0007285,2.65e-19,72;UBERON:0007503,1.34e-16,78;UBERON:0003104,3.37e-16,160;UBERON:0009142,3.37e-16,160;UBERON:0005256,5.66e-16,122;UBERON:0000486,1.78e-15,83;UBERON:0000948,8.57e-12,24;UBERON:0005498,8.57e-12,24;UBERON:0004140,8.57e-12,24;UBERON:0009881,8.57e-12,24;UBERON:0004141,8.57e-12,24;UBERON:0003084,8.57e-12,24;UBERON:0007005,8.57e-12,24;UBERON:0004139,8.57e-12,24;UBERON:0004291,8.57e-12,24;UBERON:0000926,1.30e-11,315;UBERON:0004120,1.30e-11,315;UBERON:0006603,1.30e-11,315;UBERON:0002204,3.07e-11,167;UBERON:0007100,8.50e-10,27;UBERON:0000490,1.27e-09,148;UBERON:0004872,2.84e-09,83;UBERON:0002100,2.89e-08,199;UBERON:0000479,5.25e-07,773;UBERON:0002050,5.25e-07,564;UBERON:0000923,5.93e-07,560;UBERON:0010316,5.93e-07,560;UBERON:0005291,5.93e-07,560;UBERON:0006598,5.93e-07,560;UBERON:0010317,5.93e-07,560;UBERON:0002532,5.93e-07,560;UBERON:0004535,8.88e-07,109 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,1.0007329835313,0,0.872338524100369,0,8.2123583545488,0.522371256399677,0,0,0,0,4.08428964768154,1.98838425436749,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,2.05520307534393,0,0,0.651032612147555,0.895661896959697,0.32389366601898,0,0.145398238779565,0.755751887377619,0.242584061187816,0.232429036905685,0,0.309706370895104,0.575384784644301,0.256160706529101,0.709446689665756,0,0,1.35426486594342,0,0.545812300115692,0.224723484445085,0,0.320929027076094,0,1.31940520074686,0.598390972864896,0,0.870627715885752,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0.845021145247767,0.425208599930087,1.25795187305026,0.336985893439485,0,0.64290234678832,0.285012743741249,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.84368859342554,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,48.7613732627923,9.38981203585091,3.45228916977532,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.132409180813219,12.333974692199,3.90135220418193,2.80338800071154,0,0,15.2493407345885,5.38842688278752,11.4423332179421,1.05950199351452,2.30470369792,3.74914290934075,3.74592092196385,2.2818872861778,6.42629326372745,1.64408298101271,0.323745888736263,0,7.55370433643105,1.10550885580591,7.54278202583088,11.8800285728205,4.45080472701402,1.82032272387605,2.15585442544872,8.24846958374924,6.00568895385428,6.92660288710457,3.07284334616587,0.30648779579902,4.6573798261045,2.26864366320042,0.179389635688862,0.427114777637135,1.90738711043606,2.10063767259082,2.06105058476878,1.03056216018252,1.30281799432113,0,0,0.757301322732344,0.644349290496095,1.2931684545505,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,3.2925920906512,1.47008711385542,0,0,14.7697476670351,0,0,0.857839051492628,0,0,0,0,0.977424915930974,12.4792174233549,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.616339038092582,2.69526550203004,2.45003920808834,0.37872730027914,0.317489471460845,0,0,0,0,0,0,0,0,0.2933531432838,0,0,6.762422020448,0,0,1.54324424557285,0,1.3321108950805,65.7698770827479,1.08524321078289,0,6.5147236858747,51.8872245164117,2.37585561880029,0.301439377059586,0,0.199945982364114,1.2162378064119,1.00451418286425,2.10833939483032,1.91699884393266,10.3375742250703,0,1.44781306667579,1.02738161275192,0,0,0,0,0,1.01637849688985,3.90419561572865,0.773288812777695,0.837581326671744,1.27587750330633,0,0,0.828831026872071,3.43536176813592,5.50187573165645,2.71265023699736,0,0.178428988797162,0,0.234282829985426,5.11608369537122,0,1.03473071292505,6.64225598535437,0.737476674166813,2.86715927744673,0.979005787313703,1.02943027143257,0,0.431428401637234,0.106727557803444,0,0,0.907170879989041,0.248107807818777,0.153461973288062,0,0,0,0.160853921143607,0,3.85524234506639,3.19611105563629,7.1450625732014,29.5975024634664,3.1376802184189,0,0,0,15.7295793985511,13.8389287685105,12.8501926660236,0,0,0,0,0,0,0.340187410553031,0,0,0.812839312631559,0,0,0,0,0,0,0.256450125116389,0,0,8.44936295511323,0,0,0,0,1.6068392984416,1.54673149267395,2.46477787383431,2.6095624703442,2.06754858726796,3.6522883255213,3.0453505721988,2.64202544989913,2.22580089116843,0,0,0,0,0,3.46293581513704,2.0911118104818,4.31247012246524,2.12922412126809,3.47973196830029,0,3.2918723950658,0,1.58189712359363,4.76575484809562,0.255897791311334,6.41908482050881,14.955552652519,1.56989728039846,9.53324025191568,14.2759255462748,7.53999375012393,2.83055474202642,0,2.10629228119491,4.8763373908959,7.31140468893853,0,12.6944917609427,20.6451930652421,11.3008116620243,3.85955740482287,5.97095077717098,7.0152141640602,1.73632660280006,10.4943160327461,0,0.6196469961995,3.66204283291914,1.00387946542836,0.294747123039363,0,20.9309027801653,1.68886108238131,0,1.13841952129715,1.04980416073495,0,0.670302275535787,0,5.83691564816031,0,0,0,0,1.01489521846434,0.764637207142375,0,0.238231775457789,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,9.97896857164083,0,0,0,0,0,0,0,0,0,0,1.70338495076131,9.27464430840565,0,0,0,0.390776190804081,0,0,0,0,0,99.1844864163565,1.46508179271894,0.485442086998054,0,0,0,0,0,1.9882952955326,0.844016498463076,0.222617410045812,0,0,1.9924798825107,1.10513566212459,0,0,0,0,0,0,0,1.1837208676432,0,0,0,0.74214478529481,0,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0.173624994933292,0,0.361789315876224,3.05163472634166,0.110579259931225,0,0.658156191461918,0,0,3.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| ||
|short_description=p5@HGF | |short_description=p5@HGF | ||
}} | }} |
Latest revision as of 18:05, 19 September 2015
Short description: | p5@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HGF_5end |
Coexpression cluster: | C2904_Mesenchymal_adenocarcinoma_Cardiac_small_sacrococcigeal_Preadipocyte_Smooth |
Association with transcript: | -12bp_to_ENST00000457544_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.99e-20 | 58 |
myoblast | 2.99e-20 | 58 |
multi-potent skeletal muscle stem cell | 2.99e-20 | 58 |
muscle cell | 4.68e-20 | 55 |
electrically responsive cell | 1.25e-17 | 61 |
electrically active cell | 1.25e-17 | 61 |
smooth muscle cell | 1.71e-13 | 43 |
smooth muscle myoblast | 1.71e-13 | 43 |
fibroblast | 2.30e-12 | 76 |
multi fate stem cell | 1.42e-09 | 427 |
cardiocyte | 1.80e-09 | 16 |
somatic stem cell | 5.60e-09 | 433 |
stem cell | 7.00e-09 | 441 |
vascular associated smooth muscle cell | 8.86e-07 | 32 |