FFCP PHASE1:Hg19::chr7:81399329..81399345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3082 | |EntrezGene=3082 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |HGNC=4893 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000453411_5end | |association_with_transcript=0bp_to_ENST00000453411_5end | ||
|cluster_id=chr7:81399329..81399345,- | |||
|coexpression_cluster_id=C154 | |coexpression_cluster_id=C154 | ||
|description=CAGE_peak_3_at_HGF_5end | |description=CAGE_peak_3_at_HGF_5end | ||
|id=chr7:81399329..81399345,- | |id=chr7:81399329..81399345,- | ||
|ontology_enrichment_celltype=CL:0000055!1.45e-23!180;CL:0000680!4.52e-21!57;CL:0000056!4.52e-21!57;CL:0000355!4.52e-21!57;CL:0000187!4.70e-21!54;CL:0000393!1.00e-19!60;CL:0000211!1.00e-19!60;CL:0000183!5.82e-19!59;CL:0000192!3.99e-15!42;CL:0000514!3.99e-15!42;CL:0000057!1.00e-14!75;CL:0000359!9.09e-10!32;CL:0000048!3.37e-08!430;CL:0002494!3.63e-08!16;CL:0000723!1.61e-07!436;CL:0000034!4.03e-07!444 | |ontology_enrichment_celltype=CL:0000055!1.45e-23!180;CL:0000680!4.52e-21!57;CL:0000056!4.52e-21!57;CL:0000355!4.52e-21!57;CL:0000187!4.70e-21!54;CL:0000393!1.00e-19!60;CL:0000211!1.00e-19!60;CL:0000183!5.82e-19!59;CL:0000192!3.99e-15!42;CL:0000514!3.99e-15!42;CL:0000057!1.00e-14!75;CL:0000359!9.09e-10!32;CL:0000048!3.37e-08!430;CL:0002494!3.63e-08!16;CL:0000723!1.61e-07!436;CL:0000034!4.03e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000187;7.44e-14;55!CL:0000393;5.24e-13;61!CL:0000211;5.24e-13;61!CL:0000192;2.65e-12;43!CL:0002494;3.49e-10;16!CL:0000359;2.60e-09;32!CL:0000188;2.93e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.44e-25,58;CL:0000056,4.44e-25,58;CL:0000355,4.44e-25,58;CL:0000187,1.17e-24,55;CL:0000393,4.56e-23,61;CL:0000211,4.56e-23,61;CL:0000192,1.24e-16,43;CL:0000514,1.24e-16,43;CL:0000057,2.82e-14,76;CL:0002494,3.85e-10,16;CL:0000359,1.52e-09,32;CL:0000048,5.52e-09,427;CL:0000723,2.19e-08,433;CL:0000222,8.02e-08,121;CL:0000034,1.25e-07,441;CL:0000188,2.53e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;5.65e-14;58!CL:0000514;2.65e-12;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.82e-26!83;UBERON:0002329!6.82e-26!83;UBERON:0003077!6.82e-26!83;UBERON:0003059!6.82e-26!83;UBERON:0007282!6.82e-26!83;UBERON:0009618!6.82e-26!83;UBERON:0007285!6.82e-26!83;UBERON:0004290!2.28e-23!70;UBERON:0002385!1.40e-22!63;UBERON:0001015!1.40e-22!63;UBERON:0000383!1.40e-22!63;UBERON:0001134!6.33e-22!61;UBERON:0002036!6.33e-22!61;UBERON:0003082!6.33e-22!61;UBERON:0005256!1.07e-17!143;UBERON:0000486!2.34e-17!82;UBERON:0000481!1.24e-13!347;UBERON:0004872!1.22e-11!84;UBERON:0000468!1.48e-11!659;UBERON:0000475!2.17e-11!365;UBERON:0000477!3.42e-11!286;UBERON:0000948!5.28e-11!24;UBERON:0005498!5.28e-11!24;UBERON:0004140!5.28e-11!24;UBERON:0009881!5.28e-11!24;UBERON:0004141!5.28e-11!24;UBERON:0003084!5.28e-11!24;UBERON:0007005!5.28e-11!24;UBERON:0004139!5.28e-11!24;UBERON:0004291!5.28e-11!24;UBERON:0000119!6.94e-11!312;UBERON:0000483!1.03e-10!309;UBERON:0002204!4.84e-10!167;UBERON:0007023!5.24e-10!115;UBERON:0000467!5.71e-10!625;UBERON:0007100!6.06e-10!27;UBERON:0000490!7.89e-10!138;UBERON:0000480!8.19e-10!626;UBERON:0000479!1.14e-09!787;UBERON:0004535!1.54e-09!110;UBERON:0001009!2.48e-09!113;UBERON:0002100!2.87e-09!216;UBERON:0000922!5.84e-09!612;UBERON:0004111!7.15e-09!241;UBERON:0002050!8.83e-09!605;UBERON:0005423!8.83e-09!605;UBERON:0000923!1.81e-08!604;UBERON:0005291!1.81e-08!604;UBERON:0006598!1.81e-08!604;UBERON:0002532!1.81e-08!604;UBERON:0003104!8.13e-08!238;UBERON:0009142!8.13e-08!238;UBERON:0004573!1.25e-07!33;UBERON:0004571!1.25e-07!33;UBERON:0001637!1.44e-07!42;UBERON:0003509!1.44e-07!42;UBERON:0004572!1.44e-07!42;UBERON:0002049!1.70e-07!79;UBERON:0007798!1.70e-07!79;UBERON:0000025!3.67e-07!194 | |ontology_enrichment_uberon=UBERON:0000914!6.82e-26!83;UBERON:0002329!6.82e-26!83;UBERON:0003077!6.82e-26!83;UBERON:0003059!6.82e-26!83;UBERON:0007282!6.82e-26!83;UBERON:0009618!6.82e-26!83;UBERON:0007285!6.82e-26!83;UBERON:0004290!2.28e-23!70;UBERON:0002385!1.40e-22!63;UBERON:0001015!1.40e-22!63;UBERON:0000383!1.40e-22!63;UBERON:0001134!6.33e-22!61;UBERON:0002036!6.33e-22!61;UBERON:0003082!6.33e-22!61;UBERON:0005256!1.07e-17!143;UBERON:0000486!2.34e-17!82;UBERON:0000481!1.24e-13!347;UBERON:0004872!1.22e-11!84;UBERON:0000468!1.48e-11!659;UBERON:0000475!2.17e-11!365;UBERON:0000477!3.42e-11!286;UBERON:0000948!5.28e-11!24;UBERON:0005498!5.28e-11!24;UBERON:0004140!5.28e-11!24;UBERON:0009881!5.28e-11!24;UBERON:0004141!5.28e-11!24;UBERON:0003084!5.28e-11!24;UBERON:0007005!5.28e-11!24;UBERON:0004139!5.28e-11!24;UBERON:0004291!5.28e-11!24;UBERON:0000119!6.94e-11!312;UBERON:0000483!1.03e-10!309;UBERON:0002204!4.84e-10!167;UBERON:0007023!5.24e-10!115;UBERON:0000467!5.71e-10!625;UBERON:0007100!6.06e-10!27;UBERON:0000490!7.89e-10!138;UBERON:0000480!8.19e-10!626;UBERON:0000479!1.14e-09!787;UBERON:0004535!1.54e-09!110;UBERON:0001009!2.48e-09!113;UBERON:0002100!2.87e-09!216;UBERON:0000922!5.84e-09!612;UBERON:0004111!7.15e-09!241;UBERON:0002050!8.83e-09!605;UBERON:0005423!8.83e-09!605;UBERON:0000923!1.81e-08!604;UBERON:0005291!1.81e-08!604;UBERON:0006598!1.81e-08!604;UBERON:0002532!1.81e-08!604;UBERON:0003104!8.13e-08!238;UBERON:0009142!8.13e-08!238;UBERON:0004573!1.25e-07!33;UBERON:0004571!1.25e-07!33;UBERON:0001637!1.44e-07!42;UBERON:0003509!1.44e-07!42;UBERON:0004572!1.44e-07!42;UBERON:0002049!1.70e-07!79;UBERON:0007798!1.70e-07!79;UBERON:0000025!3.67e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;7.39e-11;22!UBERON:0002385;5.57e-09;31!UBERON:0001015;5.57e-09;31!UBERON:0000383;5.57e-09;31!UBERON:0007100;7.43e-09;25!UBERON:0000075;4.18e-07;16!UBERON:0001134;8.46e-07;16!UBERON:0002036;8.46e-07;16 | |||
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| ||
|short_description=p3@HGF | |short_description=p3@HGF | ||
}} | }} |
Latest revision as of 18:04, 19 September 2015
Short description: | p3@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HGF_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | 0bp_to_ENST00000453411_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.44e-25 | 58 |
myoblast | 4.44e-25 | 58 |
multi-potent skeletal muscle stem cell | 4.44e-25 | 58 |
muscle cell | 1.17e-24 | 55 |
electrically responsive cell | 4.56e-23 | 61 |
electrically active cell | 4.56e-23 | 61 |
smooth muscle cell | 1.24e-16 | 43 |
smooth muscle myoblast | 1.24e-16 | 43 |
fibroblast | 2.82e-14 | 76 |
cardiocyte | 3.85e-10 | 16 |
vascular associated smooth muscle cell | 1.52e-09 | 32 |
multi fate stem cell | 5.52e-09 | 427 |
somatic stem cell | 2.19e-08 | 433 |
mesodermal cell | 8.02e-08 | 121 |
stem cell | 1.25e-07 | 441 |
cell of skeletal muscle | 2.53e-07 | 9 |