FFCP PHASE1:Hg19::chr2:207406777..207406786,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8745 | |EntrezGene=8745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=202 | |HGNC=202 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_AK129906_5end | |association_with_transcript=-29bp_to_AK129906_5end | ||
|cluster_id=chr2:207406777..207406786,+ | |||
|description=CAGE_peak_9_at_ADAM23_5end | |description=CAGE_peak_9_at_ADAM23_5end | ||
|id=chr2:207406777..207406786,+ | |id=chr2:207406777..207406786,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002593;2.48e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.27e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.19e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.50e-54;3!DOID:127;1.50e-54;3!DOID:0060072;3.80e-41;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.17e-55,3;DOID:127,4.17e-55,3;DOID:0060072,1.46e-41,4 | |||
|ontology_enrichment_uberon=UBERON:0002020!9.35e-20!34;UBERON:0003528!9.35e-20!34;UBERON:0001869!1.28e-19!32;UBERON:0002619!6.28e-19!22;UBERON:0001049!1.17e-18!57;UBERON:0005068!1.17e-18!57;UBERON:0006241!1.17e-18!57;UBERON:0007135!1.17e-18!57;UBERON:0001893!4.94e-18!34;UBERON:0002616!2.34e-17!59;UBERON:0002791!2.66e-17!33;UBERON:0002780!1.99e-16!41;UBERON:0001890!1.99e-16!41;UBERON:0006240!1.99e-16!41;UBERON:0001950!2.43e-16!20;UBERON:0000956!5.18e-16!25;UBERON:0000203!5.18e-16!25;UBERON:0003080!7.57e-16!42;UBERON:0001017!8.73e-16!82;UBERON:0000025!2.11e-15!194;UBERON:0005743!1.65e-14!86;UBERON:0007023!3.83e-14!115;UBERON:0000955!6.48e-14!69;UBERON:0006238!6.48e-14!69;UBERON:0004111!1.60e-13!241;UBERON:0003075!2.09e-13!86;UBERON:0007284!2.09e-13!86;UBERON:0002346!3.63e-13!90;UBERON:0000477!4.41e-12!286;UBERON:0000073!4.69e-12!94;UBERON:0001016!4.69e-12!94;UBERON:0000483!4.68e-11!309;UBERON:0000119!9.80e-11!312;UBERON:0003056!1.71e-09!61;UBERON:0000200!5.40e-09!6;UBERON:0004872!1.30e-07!84;UBERON:0001981!3.18e-07!60;UBERON:0007500!3.18e-07!60;UBERON:0004537!3.18e-07!60;UBERON:0006965!3.18e-07!60;UBERON:0002021!3.65e-07!5;UBERON:0000033!8.35e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.04e-19;22!UBERON:0001874;2.71e-19;1!UBERON:0002791;5.98e-19;32!UBERON:0001869;5.98e-19;32!UBERON:0001893;2.53e-18;34!UBERON:0000956;1.87e-17;25!UBERON:0000203;1.87e-17;25!UBERON:0003528;9.63e-16;34!UBERON:0002020;9.63e-16;34!UBERON:0002021;2.33e-15;5!UBERON:0001950;3.88e-14;20!UBERON:0002771;1.43e-10;2!UBERON:0001954;2.48e-10;2!UBERON:0003022;2.48e-10;2!UBERON:0002456;2.48e-10;2!UBERON:0002421;2.48e-10;2!UBERON:0002600;2.48e-10;2!UBERON:0000995;3.13e-10;17!UBERON:0002780;3.40e-10;41!UBERON:0001890;3.40e-10;41!UBERON:0003975;1.07e-09;18!UBERON:0004175;2.15e-08;21!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.09e-19,22;UBERON:0002791,1.64e-19,32;UBERON:0001869,1.64e-19,32;UBERON:0001874,3.25e-19,1;UBERON:0003528,2.14e-18,34;UBERON:0002020,2.14e-18,34;UBERON:0001893,2.14e-18,34;UBERON:0000956,1.94e-17,25;UBERON:0000203,1.94e-17,25;UBERON:0002780,2.55e-15,41;UBERON:0001890,2.55e-15,41;UBERON:0003080,2.55e-15,41;UBERON:0006240,2.55e-15,41;UBERON:0002021,3.12e-15,5;UBERON:0001950,4.30e-14,20;UBERON:0000073,6.84e-12,53;UBERON:0002616,6.84e-12,53;UBERON:0001049,2.94e-11,56;UBERON:0005068,2.94e-11,56;UBERON:0006241,2.94e-11,56;UBERON:0007135,2.94e-11,56;UBERON:0002771,1.43e-10,2;UBERON:0001954,2.07e-10,2;UBERON:0003022,2.07e-10,2;UBERON:0002421,2.07e-10,2;UBERON:0002600,2.07e-10,2;UBERON:0003056,2.44e-10,61;UBERON:0002456,3.27e-10,2;UBERON:0000955,3.88e-09,68;UBERON:0006238,3.88e-09,68;UBERON:0000995,1.80e-08,21;UBERON:0005795,4.13e-08,22;UBERON:0003975,4.13e-08,22;UBERON:0001017,1.13e-07,81;UBERON:0003075,1.13e-07,82;UBERON:0007284,1.13e-07,82;UBERON:0002346,2.60e-07,86;UBERON:0005383,2.79e-07,3;UBERON:0005382,2.79e-07,3;UBERON:0004175,3.35e-07,25;UBERON:0001016,6.69e-07,89 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0,0.860509862246441,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.616964956219941,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0,0,0,0.655894752046633,0.405820753925408,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.844175070377856,0,0,0.295547618953547,0.438770794307945,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0.321506296930038,0.275078873194468,0,0,0,0.425246896606173,0,0,0,0,0.35857467866569,0,0.714695326373367,0,0,1.62899880526114,1.72844298240254,2.61269888087527,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.88105059607853,0.3755727921195,0,0.110929051536852,0.18628920882415,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.159633859057151,1.02558182120378,0.252071696221718,0.207471757392654,0.645902582527404,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,1.56215619722769,0,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.475788130837822,0.526182188502793,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0.872701380680755,0.5290268405154,0,0,0,0.252332849670158,0,0,0,0,0.0918948995348449,0.250707539292375,0,0.535928260312357,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0,0.860509862246441,0.354668382198357,0,1.06748995729705,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.616964956219941,0,0.285826432630578,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.272999822815972,0.141405431953713,0,0,0,0,0,0.655894752046633,0.405820753925408,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.844175070377856,0,0,0.295547618953547,0.438770794307945,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0.321506296930038,0.275078873194468,0,0,0,0.425246896606173,0,0,0,0,0.35857467866569,0,0.714695326373367,0,0,1.62899880526114,1.72844298240254,2.61269888087527,0,0,0.170388021785422,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.88105059607853,0.3755727921195,0,0.110929051536852,0.18628920882415,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.159633859057151,1.02558182120378,0.252071696221718,0.207471757392654,0.645902582527404,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,1.56215619722769,0,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.475788130837822,0.526182188502793,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0.872701380680755,0.5290268405154,0,0,0,0.252332849670158,0,0,0,0,0.0918948995348449,0.250707539292375,0,0.535928260312357,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p9@ADAM23 | |short_description=p9@ADAM23 | ||
}} | }} |
Latest revision as of 17:59, 19 September 2015
Short description: | p9@ADAM23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ADAM23_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_AK129906_5end |
EntrezGene: | ADAM23 |
HGNC: | 202 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.17e-55 | 3 |
leiomyoma | 4.17e-55 | 3 |
benign neoplasm | 1.46e-41 | 4 |