FFCP PHASE1:Hg19::chr18:47340487..47340514,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10449 | |EntrezGene=10449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=83 | |HGNC=83 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-204bp_to_uc002ldx.3_5end | |association_with_transcript=-204bp_to_uc002ldx.3_5end | ||
|cluster_id=chr18:47340487..47340514,- | |||
|coexpression_cluster_id=C22 | |coexpression_cluster_id=C22 | ||
|description=CAGE_peak_7_at_ACAA2_5end | |description=CAGE_peak_7_at_ACAA2_5end | ||
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|ontology_enrichment_celltype=CL:0000791!7.49e-11!18;CL:0000789!7.49e-11!18;CL:0002420!7.49e-11!18;CL:0002419!7.49e-11!18;CL:0000790!7.49e-11!18;CL:0000084!1.89e-09!25;CL:0000827!1.89e-09!25;CL:0000625!3.36e-07!11 | |ontology_enrichment_celltype=CL:0000791!7.49e-11!18;CL:0000789!7.49e-11!18;CL:0002420!7.49e-11!18;CL:0002419!7.49e-11!18;CL:0000790!7.49e-11!18;CL:0000084!1.89e-09!25;CL:0000827!1.89e-09!25;CL:0000625!3.36e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.14e-14;18!CL:0000789;3.14e-14;18!CL:0002419;3.14e-14;18!CL:0000084;1.55e-12;25!CL:0000625;2.21e-09;11 | |ontology_enrichment_celltype_v019=CL:0000791;3.14e-14;18!CL:0000789;3.14e-14;18!CL:0002419;3.14e-14;18!CL:0000084;1.55e-12;25!CL:0000625;2.21e-09;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.57e-14,18;CL:0000789,4.57e-14,18;CL:0002420,4.57e-14,18;CL:0002419,4.57e-14,18;CL:0000790,4.57e-14,18;CL:0000084,1.53e-12,25;CL:0000827,1.53e-12,25;CL:0000625,3.69e-09,11;CL:0000838,1.12e-07,52;CL:0000542,2.44e-07,53;CL:0000051,2.44e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;3.14e-14;18 | |ontology_enrichment_development_v019=CL:0000790;3.14e-14;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.76e-07!15;UBERON:0000179!1.76e-07!15;UBERON:0000463!1.76e-07!15 | |ontology_enrichment_uberon=UBERON:0000178!1.76e-07!15;UBERON:0000179!1.76e-07!15;UBERON:0000463!1.76e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-08;15!UBERON:0000179;1.81e-08;15!UBERON:0000463;1.81e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.81e-08;15!UBERON:0000179;1.81e-08;15!UBERON:0000463;1.81e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.39e-08,15;UBERON:0000179,1.39e-08,15;UBERON:0000463,1.39e-08,15 | |||
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| ||
|short_description=p7@ACAA2 | |short_description=p7@ACAA2 | ||
}} | }} |
Latest revision as of 17:59, 19 September 2015
Short description: | p7@ACAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ACAA2_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -204bp_to_uc002ldx.3_5end |
EntrezGene: | ACAA2 |
HGNC: | 83 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.57e-14 | 18 |
alpha-beta T cell | 4.57e-14 | 18 |
immature T cell | 4.57e-14 | 18 |
mature T cell | 4.57e-14 | 18 |
immature alpha-beta T cell | 4.57e-14 | 18 |
T cell | 1.53e-12 | 25 |
pro-T cell | 1.53e-12 | 25 |
CD8-positive, alpha-beta T cell | 3.69e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.12e-07 | 52 |
lymphocyte | 2.44e-07 | 53 |
common lymphoid progenitor | 2.44e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 1.39e-08 | 15 |
haemolymphatic fluid | 1.39e-08 | 15 |
organism substance | 1.39e-08 | 15 |