FFCP PHASE1:Hg19::chr6:74104521..74104528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55510 | |EntrezGene=55510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18677 | |HGNC=18677 | ||
|TSSclassifier=strong | |||
|UniProt=B4E0C8 | |UniProt=B4E0C8 | ||
|association_with_transcript=-47bp_to_ENST00000539829_5end | |association_with_transcript=-47bp_to_ENST00000539829_5end | ||
|cluster_id=chr6:74104521..74104528,+ | |||
|coexpression_cluster_id=C157 | |coexpression_cluster_id=C157 | ||
|description=CAGE_peak_4_at_DDX43_5end | |description=CAGE_peak_4_at_DDX43_5end | ||
|id=chr6:74104521..74104528,+ | |id=chr6:74104521..74104528,+ | ||
|ontology_enrichment_celltype=CL:0000039;1.35e-32;7!CL:0000586;1.35e-32;7!CL:0000746;1.30e-09;3!CL:0000737;1.59e-07;4 | |ontology_enrichment_celltype=CL:0000039!4.95e-09!7;CL:0000586!4.95e-09!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;1.35e-32;7!CL:0000586;1.35e-32;7!CL:0000746;1.30e-09;3!CL:0000737;1.59e-07;4 | ||
|ontology_enrichment_disease=DOID:3095;1.78e-18;22!DOID:2994;1.78e-18;22 | |ontology_enrichment_celltype_v019_2=CL:0000039,1.67e-32,7;CL:0000586,1.67e-32,7;CL:0000746,1.19e-09,3;CL:0000513,1.19e-09,3;CL:0000737,1.49e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0000473;3.07e-77;8!UBERON:0003135;2.39e-56;11!UBERON:0000991;9.15e-30;21!UBERON:0003101;1.97e-28;22!UBERON:0000079;1.97e-28;22!UBERON:0002323;1.23e-13;45!UBERON:0003133;1.05e-10;44!UBERON:0004458;2.42e-09;48!UBERON:0002553;5.10e-09;52 | |ontology_enrichment_development_v019=UBERON:0009117;6.39e-62;10!UBERON:0005564;6.39e-62;10!CL:0000513;1.30e-09;3 | ||
|ontology_enrichment_disease=DOID:0050687!1.83e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.78e-18;22!DOID:2994;1.78e-18;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.99e-18,22;DOID:2994,1.99e-18,22 | |||
|ontology_enrichment_uberon=UBERON:0004458!7.33e-09!49;UBERON:0002323!2.27e-08!46;UBERON:0000473!3.68e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.07e-77;8!UBERON:0003135;2.39e-56;11!UBERON:0000991;9.15e-30;21!UBERON:0003101;1.97e-28;22!UBERON:0000079;1.97e-28;22!UBERON:0002323;1.23e-13;45!UBERON:0003133;1.05e-10;44!UBERON:0004458;2.42e-09;48!UBERON:0002553;5.10e-09;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.60e-77,8;UBERON:0003135,2.69e-56,11;UBERON:0000991,9.72e-30,21;UBERON:0009196,9.72e-30,21;UBERON:0009117,9.72e-30,21;UBERON:0005564,9.72e-30,21;UBERON:0004176,2.08e-28,22;UBERON:0003101,2.08e-28,22;UBERON:0000079,2.08e-28,22;UBERON:0002323,1.67e-19,46;UBERON:0004458,2.54e-18,49;UBERON:0003886,1.21e-16,54;UBERON:0002553,9.41e-15,61;UBERON:0003133,3.28e-13,48;UBERON:0005156,8.54e-11,59;UBERON:0000990,8.54e-11,59 | |||
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| ||
|short_description=p4@DDX43 | |short_description=p4@DDX43 | ||
}} | }} |
Latest revision as of 17:55, 19 September 2015
Short description: | p4@DDX43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DDX43_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | -47bp_to_ENST00000539829_5end |
EntrezGene: | DDX43 |
HGNC: | 18677 |
UniProt: | B4E0C8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.67e-32 | 7 |
germ cell | 1.67e-32 | 7 |
cardiac muscle cell | 1.19e-09 | 3 |
cardiac muscle myoblast | 1.19e-09 | 3 |
striated muscle cell | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 3.60e-77 | 8 |
male reproductive organ | 2.69e-56 | 11 |
gonad | 9.72e-30 | 21 |
indifferent external genitalia | 9.72e-30 | 21 |
indifferent gonad | 9.72e-30 | 21 |
gonad primordium | 9.72e-30 | 21 |
external genitalia | 2.08e-28 | 22 |
male organism | 2.08e-28 | 22 |
male reproductive system | 2.08e-28 | 22 |
body cavity | 1.67e-19 | 46 |
body cavity or lining | 2.54e-18 | 49 |
body cavity precursor | 1.21e-16 | 54 |
anatomical cavity | 9.41e-15 | 61 |
reproductive organ | 3.28e-13 | 48 |
reproductive structure | 8.54e-11 | 59 |
reproductive system | 8.54e-11 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.99e-18 | 22 |
germ cell cancer | 1.99e-18 | 22 |