FFCP PHASE1:Hg19::chr1:201368775..201368784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3898 | |EntrezGene=3898 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6472 | |HGNC=6472 | ||
|TSSclassifier=strong | |||
|UniProt=O00515 | |UniProt=O00515 | ||
|association_with_transcript=-39bp_to_ENST00000391967_5end | |association_with_transcript=-39bp_to_ENST00000391967_5end | ||
|cluster_id=chr1:201368775..201368784,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_7_at_LAD1_5end | |description=CAGE_peak_7_at_LAD1_5end | ||
|id=chr1:201368775..201368784,- | |id=chr1:201368775..201368784,- | ||
|ontology_enrichment_celltype=CL:0000453!4.97e-16!5;CL:0000066!3.46e-14!254;CL:0000990!3.78e-12!8;CL:0000223!3.12e-11!59;CL:0002076!3.96e-10!43;CL:0000451!8.71e-10!10;CL:0002368!1.13e-07!13;CL:0001014!4.18e-07!2;CL:0001016!4.18e-07!2 | |ontology_enrichment_celltype=CL:0000453!4.97e-16!5;CL:0000066!3.46e-14!254;CL:0000990!3.78e-12!8;CL:0000223!3.12e-11!59;CL:0002076!3.96e-10!43;CL:0000451!8.71e-10!10;CL:0002368!1.13e-07!13;CL:0001014!4.18e-07!2;CL:0001016!4.18e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.56e-71;5!CL:0000990;2.91e-40;8!CL:0000451;3.85e-33;10!CL:0000575;6.30e-21;2!CL:0002328;1.96e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.56e-71,5;CL:0000990,2.91e-40,8;CL:0000451,3.85e-33,10;CL:0000575,6.96e-21,2;CL:0002328,1.83e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.34e-09!106;DOID:299!1.04e-07!25 | |ontology_enrichment_disease=DOID:305!5.34e-09!106;DOID:299!1.04e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.05e-10!169;UBERON:0000925!2.05e-10!169;UBERON:0006595!2.05e-10!169;UBERON:0003729!1.29e-09!5;UBERON:0001007!1.66e-08!155;UBERON:0001555!1.66e-08!155;UBERON:0007026!1.66e-08!155;UBERON:0004921!6.60e-08!129;UBERON:0004185!6.60e-08!129;UBERON:0000344!7.02e-08!12;UBERON:0000058!1.26e-07!26;UBERON:0007499!1.65e-07!25;UBERON:0009856!3.70e-07!26;UBERON:0002394!4.44e-07!4;UBERON:0003928!4.44e-07!4;UBERON:0003343!4.93e-07!4;UBERON:0004785!4.93e-07!4 | |ontology_enrichment_uberon=UBERON:0004119!2.05e-10!169;UBERON:0000925!2.05e-10!169;UBERON:0006595!2.05e-10!169;UBERON:0003729!1.29e-09!5;UBERON:0001007!1.66e-08!155;UBERON:0001555!1.66e-08!155;UBERON:0007026!1.66e-08!155;UBERON:0004921!6.60e-08!129;UBERON:0004185!6.60e-08!129;UBERON:0000344!7.02e-08!12;UBERON:0000058!1.26e-07!26;UBERON:0007499!1.65e-07!25;UBERON:0009856!3.70e-07!26;UBERON:0002394!4.44e-07!4;UBERON:0003928!4.44e-07!4;UBERON:0003343!4.93e-07!4;UBERON:0004785!4.93e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.96e-14;3!UBERON:0002031;1.96e-14;3!UBERON:0000964;3.60e-11;4!UBERON:0010409;3.60e-11;4!UBERON:0002185;3.35e-09;5!UBERON:0000485;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.83e-14,3;UBERON:0002031,1.83e-14,3;UBERON:0000964,3.79e-11,4;UBERON:0010409,3.79e-11,4;UBERON:0004348,3.79e-11,4;UBERON:0005427,3.79e-11,4;UBERON:0002185,3.22e-09,5 | |||
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| ||
|short_description=p7@LAD1 | |short_description=p7@LAD1 | ||
}} | }} |
Latest revision as of 17:48, 19 September 2015
Short description: | p7@LAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LAD1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -39bp_to_ENST00000391967_5end |
EntrezGene: | LAD1 |
HGNC: | 6472 |
UniProt: | O00515 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.56e-71 | 5 |
conventional dendritic cell | 2.91e-40 | 8 |
dendritic cell | 3.85e-33 | 10 |
corneal epithelial cell | 6.96e-21 | 2 |
bronchial epithelial cell | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.83e-14 | 3 |
epithelium of bronchus | 1.83e-14 | 3 |
cornea | 3.79e-11 | 4 |
eye surface | 3.79e-11 | 4 |
optic eminence | 3.79e-11 | 4 |
corneal primordium | 3.79e-11 | 4 |
bronchus | 3.22e-09 | 5 |