FFCP PHASE1:Hg19::chr18:47087390..47087399,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:47087390..47087399,+
|short_description=p7@LIPG
|description=CAGE_peak_7_at_LIPG_5end
|association_with_transcript=321bp_to_AK125344_5end
|EntrezGene=938...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9388 | |EntrezGene=9388 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6623 | |HGNC=6623 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=321bp_to_AK125344_5end | |||
|cluster_id=chr18:47087390..47087399,+ | |||
|description=CAGE_peak_7_at_LIPG_5end | |||
|id=chr18:47087390..47087399,+ | |||
|ontology_enrichment_celltype=CL:0002618!1.80e-10!3;CL:0002543!7.47e-09!6;CL:0000071!3.48e-08!18;CL:0002546!3.48e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002262;7.14e-26;2!CL:1000398;7.14e-26;2!CL:0002593;7.14e-26;2!CL:0002600;7.14e-26;2!CL:0002595;3.26e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,5.56e-26,2;CL:1000398,5.56e-26,2;CL:0002600,7.14e-26,2;CL:0002593,9.18e-26,2;CL:0002595,3.60e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.66e-11;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.01e-08!194;UBERON:0004111!3.36e-08!241;UBERON:0001986!3.48e-08!18;UBERON:0004638!3.48e-08!18;UBERON:0004852!3.48e-08!18;UBERON:0000341!9.55e-08!2;UBERON:0000477!1.86e-07!286;UBERON:0000483!2.04e-07!309;UBERON:0000119!2.93e-07!312;UBERON:0003103!5.83e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;4.21e-29;7!UBERON:0001281;7.14e-26;2!UBERON:0003497;7.14e-26;2!UBERON:0003909;7.14e-26;2!UBERON:0003835;7.14e-26;2!UBERON:0002456;7.14e-26;2!UBERON:0001280;9.45e-18;3!UBERON:0004647;9.45e-18;3!UBERON:0002046;2.66e-11;5!UBERON:0003834;3.26e-11;5!UBERON:0001533;3.26e-11;5!UBERON:0003126;2.18e-08;7!UBERON:0001005;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,4.21e-29,7;UBERON:0001281,5.56e-26,2;UBERON:0003497,5.56e-26,2;UBERON:0003909,5.56e-26,2;UBERON:0003835,5.56e-26,2;UBERON:0002456,9.18e-26,2;UBERON:0001280,8.00e-18,3;UBERON:0004647,8.00e-18,3;UBERON:0005171,8.00e-18,3;UBERON:0002046,2.66e-11,5;UBERON:0004117,2.66e-11,5;UBERON:0007689,2.66e-11,5;UBERON:0007123,2.66e-11,5;UBERON:0003091,2.66e-11,5;UBERON:0003834,3.60e-11,5;UBERON:0001533,3.60e-11,5;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0003126,2.18e-08,7;UBERON:0001005,2.18e-08,7;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9;UBERON:0002368,9.98e-07,35 | |||
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| ||
|short_description=p7@LIPG | |||
}} | }} |
Latest revision as of 17:43, 19 September 2015
Short description: | p7@LIPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LIPG_5end |
Coexpression cluster: | NA |
Association with transcript: | 321bp_to_AK125344_5end |
EntrezGene: | LIPG |
HGNC: | 6623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 5.56e-26 | 2 |
endothelial cell of hepatic sinusoid | 5.56e-26 | 2 |
smooth muscle cell of trachea | 7.14e-26 | 2 |
smooth muscle cell of the internal thoracic artery | 9.18e-26 | 2 |
smooth muscle cell of the subclavian artery | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 4.21e-29 | 7 |
hepatic sinusoid | 5.56e-26 | 2 |
abdomen blood vessel | 5.56e-26 | 2 |
sinusoid | 5.56e-26 | 2 |
abdominal segment blood vessel | 5.56e-26 | 2 |
internal thoracic artery | 9.18e-26 | 2 |
liver parenchyma | 8.00e-18 | 3 |
liver lobule | 8.00e-18 | 3 |
hepatic duct | 8.00e-18 | 3 |
thyroid gland | 2.66e-11 | 5 |
pharyngeal pouch | 2.66e-11 | 5 |
thyroid diverticulum | 2.66e-11 | 5 |
pharyngeal pouch 2 | 2.66e-11 | 5 |
thyroid primordium | 2.66e-11 | 5 |
thoracic segment blood vessel | 3.60e-11 | 5 |
subclavian artery | 3.60e-11 | 5 |
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
trachea | 2.18e-08 | 7 |
respiratory airway | 2.18e-08 | 7 |
biliary system | 7.91e-07 | 9 |
biliary tree | 7.91e-07 | 9 |
biliary bud | 7.91e-07 | 9 |
endocrine gland | 9.98e-07 | 35 |