FFCP PHASE1:Hg19::chr1:201342501..201342514,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt=Q15608 | |UniProt=Q15608 | ||
|association_with_transcript=-58bp_to_ENST00000466570,uc001gwk.1_5end | |association_with_transcript=-58bp_to_ENST00000466570,uc001gwk.1_5end | ||
|cluster_id=chr1:201342501..201342514,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_17_at_TNNT2_5end | |description=CAGE_peak_17_at_TNNT2_5end | ||
|id=chr1:201342501..201342514,- | |id=chr1:201342501..201342514,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.37e-41;4!UBERON:0007284;4.37e-41;4!UBERON:0010226;1.56e-19;1!UBERON:0010227;2.06e-19;1!UBERON:0004140;2.71e-19;1 | |||
|ontology_enrichment_disease=DOID:114!3.04e-17!2;DOID:178!1.89e-09!1;DOID:326!1.89e-09!1;DOID:3978!1.89e-09!1;DOID:3394!1.89e-09!1;DOID:5844!1.89e-09!1;DOID:1287!4.55e-09!4 | |ontology_enrichment_disease=DOID:114!3.04e-17!2;DOID:178!1.89e-09!1;DOID:326!1.89e-09!1;DOID:3978!1.89e-09!1;DOID:3394!1.89e-09!1;DOID:5844!1.89e-09!1;DOID:1287!4.55e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.57e-37;2!DOID:178;1.30e-19;1!DOID:326;1.30e-19;1!DOID:3978;1.30e-19;1!DOID:3394;1.30e-19;1!DOID:5844;1.30e-19;1!DOID:1287;2.48e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.57e-37,2;DOID:178,1.30e-19,1;DOID:326,1.30e-19,1;DOID:3978,1.30e-19,1;DOID:3394,1.30e-19,1;DOID:5844,1.30e-19,1;DOID:1287,2.48e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.40e-24!3;UBERON:0009751!1.40e-24!3;UBERON:0000946!1.40e-24!3;UBERON:0002523!1.40e-24!3;UBERON:0005983!1.40e-24!3;UBERON:0002165!1.40e-24!3;UBERON:0002062!1.40e-24!3;UBERON:0007280!1.40e-24!3;UBERON:0004151!1.52e-24!3;UBERON:0007100!1.41e-22!27;UBERON:0002081!6.75e-17!2;UBERON:0003103!6.93e-17!69;UBERON:0002133!7.30e-17!2;UBERON:0000948!1.64e-11!24;UBERON:0005498!1.64e-11!24;UBERON:0004140!1.64e-11!24;UBERON:0009881!1.64e-11!24;UBERON:0004141!1.64e-11!24;UBERON:0003084!1.64e-11!24;UBERON:0007005!1.64e-11!24;UBERON:0004139!1.64e-11!24;UBERON:0004291!1.64e-11!24;UBERON:0007023!1.08e-10!115;UBERON:0002146!1.74e-09!1;UBERON:0005623!1.74e-09!1;UBERON:0002084!2.04e-09!1;UBERON:0002082!2.04e-09!1;UBERON:0004706!2.04e-09!1;UBERON:0002079!2.22e-09!1;UBERON:0002135!2.40e-09!1;UBERON:0007029!2.82e-09!1;UBERON:0002134!3.05e-09!1;UBERON:0005208!3.05e-09!1;UBERON:0005946!3.05e-09!1;UBERON:0005965!3.05e-09!1;UBERON:0002078!3.05e-09!1;UBERON:0005418!4.19e-09!1;UBERON:0001389!4.19e-09!1;UBERON:0000026!4.19e-09!1;UBERON:0008784!4.19e-09!1;UBERON:0006058!4.19e-09!1;UBERON:0003663!4.19e-09!1;UBERON:0001383!4.19e-09!1;UBERON:0004256!4.19e-09!1;UBERON:0002529!4.19e-09!1;UBERON:0004708!4.19e-09!1;UBERON:0002101!4.19e-09!1;UBERON:0004709!4.19e-09!1;UBERON:0003661!4.19e-09!1;UBERON:0002471!4.19e-09!1;UBERON:0004357!4.19e-09!1;UBERON:0009872!4.19e-09!1;UBERON:0004347!4.19e-09!1;UBERON:0005420!4.19e-09!1;UBERON:0005732!4.19e-09!1;UBERON:0006057!4.19e-09!1;UBERON:0000978!4.19e-09!1;UBERON:0002103!4.19e-09!1;UBERON:0001665!4.19e-09!1;UBERON:0003823!4.19e-09!1;UBERON:0000154!4.19e-09!1;UBERON:0005733!4.19e-09!1;UBERON:0005730!4.19e-09!1;UBERON:0000998!4.54e-09!1;UBERON:0006868!4.54e-09!1;UBERON:0000974!2.56e-07!10 | |ontology_enrichment_uberon=UBERON:0003978!1.40e-24!3;UBERON:0009751!1.40e-24!3;UBERON:0000946!1.40e-24!3;UBERON:0002523!1.40e-24!3;UBERON:0005983!1.40e-24!3;UBERON:0002165!1.40e-24!3;UBERON:0002062!1.40e-24!3;UBERON:0007280!1.40e-24!3;UBERON:0004151!1.52e-24!3;UBERON:0007100!1.41e-22!27;UBERON:0002081!6.75e-17!2;UBERON:0003103!6.93e-17!69;UBERON:0002133!7.30e-17!2;UBERON:0000948!1.64e-11!24;UBERON:0005498!1.64e-11!24;UBERON:0004140!1.64e-11!24;UBERON:0009881!1.64e-11!24;UBERON:0004141!1.64e-11!24;UBERON:0003084!1.64e-11!24;UBERON:0007005!1.64e-11!24;UBERON:0004139!1.64e-11!24;UBERON:0004291!1.64e-11!24;UBERON:0007023!1.08e-10!115;UBERON:0002146!1.74e-09!1;UBERON:0005623!1.74e-09!1;UBERON:0002084!2.04e-09!1;UBERON:0002082!2.04e-09!1;UBERON:0004706!2.04e-09!1;UBERON:0002079!2.22e-09!1;UBERON:0002135!2.40e-09!1;UBERON:0007029!2.82e-09!1;UBERON:0002134!3.05e-09!1;UBERON:0005208!3.05e-09!1;UBERON:0005946!3.05e-09!1;UBERON:0005965!3.05e-09!1;UBERON:0002078!3.05e-09!1;UBERON:0005418!4.19e-09!1;UBERON:0001389!4.19e-09!1;UBERON:0000026!4.19e-09!1;UBERON:0008784!4.19e-09!1;UBERON:0006058!4.19e-09!1;UBERON:0003663!4.19e-09!1;UBERON:0001383!4.19e-09!1;UBERON:0004256!4.19e-09!1;UBERON:0002529!4.19e-09!1;UBERON:0004708!4.19e-09!1;UBERON:0002101!4.19e-09!1;UBERON:0004709!4.19e-09!1;UBERON:0003661!4.19e-09!1;UBERON:0002471!4.19e-09!1;UBERON:0004357!4.19e-09!1;UBERON:0009872!4.19e-09!1;UBERON:0004347!4.19e-09!1;UBERON:0005420!4.19e-09!1;UBERON:0005732!4.19e-09!1;UBERON:0006057!4.19e-09!1;UBERON:0000978!4.19e-09!1;UBERON:0002103!4.19e-09!1;UBERON:0001665!4.19e-09!1;UBERON:0003823!4.19e-09!1;UBERON:0000154!4.19e-09!1;UBERON:0005733!4.19e-09!1;UBERON:0005730!4.19e-09!1;UBERON:0000998!4.54e-09!1;UBERON:0006868!4.54e-09!1;UBERON:0000974!2.56e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.09e-57;25!UBERON:0003978;1.81e-54;3!UBERON:0000946;1.81e-54;3!UBERON:0004151;2.61e-54;3!UBERON:0002081;1.18e-36;2!UBERON:0002133;1.18e-36;2!UBERON:0000948;2.33e-29;22!UBERON:0002146;1.08e-19;1!UBERON:0005623;1.08e-19;1!UBERON:0002084;1.56e-19;1!UBERON:0002082;1.56e-19;1!UBERON:0002079;2.06e-19;1!UBERON:0002135;2.06e-19;1!UBERON:0007029;4.28e-19;1!UBERON:0002134;4.28e-19;1!UBERON:0005208;4.28e-19;1!UBERON:0004145;4.28e-19;1!UBERON:0005946;4.28e-19;1!UBERON:0005965;4.28e-19;1!UBERON:0002078;4.28e-19;1!UBERON:0010313;6.54e-17;10!UBERON:0003103;9.56e-12;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.81e-54,3;UBERON:0009751,1.81e-54,3;UBERON:0000946,1.81e-54,3;UBERON:0002523,1.81e-54,3;UBERON:0005983,1.81e-54,3;UBERON:0002165,1.81e-54,3;UBERON:0002062,1.81e-54,3;UBERON:0007280,1.81e-54,3;UBERON:0004151,2.17e-54,3;UBERON:0007100,2.27e-53,27;UBERON:0002081,9.84e-37,2;UBERON:0010227,9.84e-37,2;UBERON:0002133,1.18e-36,2;UBERON:0000948,6.31e-27,24;UBERON:0005498,6.31e-27,24;UBERON:0004140,6.31e-27,24;UBERON:0009881,6.31e-27,24;UBERON:0004141,6.31e-27,24;UBERON:0003084,6.31e-27,24;UBERON:0007005,6.31e-27,24;UBERON:0004139,6.31e-27,24;UBERON:0004291,6.31e-27,24;UBERON:0004797,7.73e-24,7;UBERON:0003103,5.72e-21,68;UBERON:0002146,1.08e-19,1;UBERON:0005623,1.08e-19,1;UBERON:0002084,1.56e-19,1;UBERON:0002082,1.56e-19,1;UBERON:0010226,1.56e-19,1;UBERON:0002079,1.88e-19,1;UBERON:0002135,2.25e-19,1;UBERON:0007029,3.25e-19,1;UBERON:0002134,3.91e-19,1;UBERON:0005208,3.91e-19,1;UBERON:0005946,3.91e-19,1;UBERON:0005965,3.91e-19,1;UBERON:0002078,3.91e-19,1;UBERON:0010313,6.54e-17,10;UBERON:0002342,6.54e-17,10;UBERON:0005062,6.54e-17,10;UBERON:0001009,1.60e-12,112;UBERON:0007023,1.06e-09,114;UBERON:0004872,1.06e-07,83;UBERON:0004145,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,3.35138881526705,9.39557738447903,1.43574604915363,6.38972801596772,30.04582336956,1.11585728720936,2.28423806454869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,3.57347663186684,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,3.35138881526705,9.39557738447903,1.43574604915363,6.38972801596772,30.04582336956,1.11585728720936,2.28423806454869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,3.57347663186684,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@TNNT2 | |short_description=p17@TNNT2 | ||
}} | }} |
Latest revision as of 17:42, 19 September 2015
Short description: | p17@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -58bp_to_ENST00000466570, uc001gwk.1_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | Q15608 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.57e-37 | 2 |
vascular disease | 1.30e-19 | 1 |
ischemia | 1.30e-19 | 1 |
extrinsic cardiomyopathy | 1.30e-19 | 1 |
myocardial ischemia | 1.30e-19 | 1 |
myocardial infarction | 1.30e-19 | 1 |
cardiovascular system disease | 2.48e-19 | 4 |