FFCP PHASE1:Hg19::chr1:201342456..201342467,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt=Q15608 | |UniProt=Q15608 | ||
|association_with_transcript=-13bp_to_ENST00000466570,uc001gwk.1_5end | |association_with_transcript=-13bp_to_ENST00000466570,uc001gwk.1_5end | ||
|cluster_id=chr1:201342456..201342467,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_13_at_TNNT2_5end | |description=CAGE_peak_13_at_TNNT2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!1.62e-16!9 | |ontology_enrichment_celltype=CL:0000188!1.62e-16!9 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
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|ontology_enrichment_disease_v019=DOID:114;1.89e-37;2!DOID:178;1.56e-19;1!DOID:326;1.56e-19;1!DOID:3978;1.56e-19;1!DOID:3394;1.56e-19;1!DOID:5844;1.56e-19;1!DOID:1287;2.71e-19;4 | |ontology_enrichment_disease_v019=DOID:114;1.89e-37;2!DOID:178;1.56e-19;1!DOID:326;1.56e-19;1!DOID:3978;1.56e-19;1!DOID:3394;1.56e-19;1!DOID:5844;1.56e-19;1!DOID:1287;2.71e-19;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.89e-37,2;DOID:178,1.56e-19,1;DOID:326,1.56e-19,1;DOID:3978,1.56e-19,1;DOID:3394,1.56e-19,1;DOID:5844,1.56e-19,1;DOID:1287,2.71e-19,4 | |||
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|short_description=p13@TNNT2 | |short_description=p13@TNNT2 | ||
}} | }} |
Latest revision as of 17:41, 19 September 2015
Short description: | p13@TNNT2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -13bp_to_ENST00000466570, uc001gwk.1_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | Q15608 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.89e-37 | 2 |
vascular disease | 1.56e-19 | 1 |
ischemia | 1.56e-19 | 1 |
extrinsic cardiomyopathy | 1.56e-19 | 1 |
myocardial ischemia | 1.56e-19 | 1 |
myocardial infarction | 1.56e-19 | 1 |
cardiovascular system disease | 2.71e-19 | 4 |