FFCP PHASE1:Hg19::chr1:90098606..90098635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84230 | |EntrezGene=84230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25075 | |HGNC=25075 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDW0 | |UniProt=Q8TDW0 | ||
|association_with_transcript=0bp_to_ENST00000370454,ENST00000479252_5end | |association_with_transcript=0bp_to_ENST00000370454,ENST00000479252_5end | ||
|cluster_id=chr1:90098606..90098635,+ | |||
|description=CAGE_peak_5_at_LRRC8C_5end | |description=CAGE_peak_5_at_LRRC8C_5end | ||
|id=chr1:90098606..90098635,+ | |id=chr1:90098606..90098635,+ | ||
|ontology_enrichment_celltype=CL:0002087!7.57e-20!119;CL:0002031!1.10e-15!124;CL:0000738!1.27e-14!140;CL:0000037!2.07e-14!172;CL:0000566!2.07e-14!172;CL:0000542!5.38e-14!53;CL:0000051!5.38e-14!53;CL:0000838!6.69e-14!52;CL:0002032!6.77e-14!165;CL:0000837!6.77e-14!165;CL:0000988!3.53e-12!182;CL:0000084!5.12e-11!25;CL:0000827!5.12e-11!25;CL:0000791!7.84e-11!18;CL:0000789!7.84e-11!18;CL:0002420!7.84e-11!18;CL:0002419!7.84e-11!18;CL:0000790!7.84e-11!18;CL:0002057!3.08e-07!42;CL:0002009!3.73e-07!65 | |ontology_enrichment_celltype=CL:0002087!7.57e-20!119;CL:0002031!1.10e-15!124;CL:0000738!1.27e-14!140;CL:0000037!2.07e-14!172;CL:0000566!2.07e-14!172;CL:0000542!5.38e-14!53;CL:0000051!5.38e-14!53;CL:0000838!6.69e-14!52;CL:0002032!6.77e-14!165;CL:0000837!6.77e-14!165;CL:0000988!3.53e-12!182;CL:0000084!5.12e-11!25;CL:0000827!5.12e-11!25;CL:0000791!7.84e-11!18;CL:0000789!7.84e-11!18;CL:0002420!7.84e-11!18;CL:0002419!7.84e-11!18;CL:0000790!7.84e-11!18;CL:0002057!3.08e-07!42;CL:0002009!3.73e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.16e-17;25!CL:0000791;6.30e-17;18!CL:0000789;6.30e-17;18!CL:0002419;6.30e-17;18!CL:0000625;9.62e-10;11!CL:0000542;7.21e-09;53!CL:0000624;5.68e-08;6!CL:0002087;2.76e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.03e-18,115;CL:0000838,2.36e-17,52;CL:0000084,4.20e-17,25;CL:0000827,4.20e-17,25;CL:0000791,4.62e-17,18;CL:0000789,4.62e-17,18;CL:0002420,4.62e-17,18;CL:0002419,4.62e-17,18;CL:0000790,4.62e-17,18;CL:0000542,9.13e-17,53;CL:0000051,9.13e-17,53;CL:0002031,3.28e-16,120;CL:0000037,2.38e-15,168;CL:0000738,3.16e-15,136;CL:0002032,2.16e-14,161;CL:0000837,2.16e-14,161;CL:0000988,2.50e-13,177;CL:0000625,4.98e-10,11;CL:0000624,7.02e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.30e-17;18!CL:0000051;7.21e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.21e-07!112;UBERON:0002390!9.11e-07!102;UBERON:0003061!9.11e-07!102 | |ontology_enrichment_uberon=UBERON:0002193!1.21e-07!112;UBERON:0002390!9.11e-07!102;UBERON:0003061!9.11e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@LRRC8C | |short_description=p5@LRRC8C | ||
}} | }} |
Latest revision as of 17:38, 19 September 2015
Short description: | p5@LRRC8C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LRRC8C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370454, ENST00000479252_5end |
EntrezGene: | LRRC8C |
HGNC: | 25075 |
UniProt: | Q8TDW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.03e-18 | 115 |
lymphoid lineage restricted progenitor cell | 2.36e-17 | 52 |
T cell | 4.20e-17 | 25 |
pro-T cell | 4.20e-17 | 25 |
mature alpha-beta T cell | 4.62e-17 | 18 |
alpha-beta T cell | 4.62e-17 | 18 |
immature T cell | 4.62e-17 | 18 |
mature T cell | 4.62e-17 | 18 |
immature alpha-beta T cell | 4.62e-17 | 18 |
lymphocyte | 9.13e-17 | 53 |
common lymphoid progenitor | 9.13e-17 | 53 |
hematopoietic lineage restricted progenitor cell | 3.28e-16 | 120 |
hematopoietic stem cell | 2.38e-15 | 168 |
leukocyte | 3.16e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.16e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-14 | 161 |
hematopoietic cell | 2.50e-13 | 177 |
CD8-positive, alpha-beta T cell | 4.98e-10 | 11 |
CD4-positive, alpha-beta T cell | 7.02e-08 | 6 |