FFCP PHASE1:Hg19::chr6:108882109..108882173,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:108882109..108882173,+
|short_description=p2@FOXO3
|description=CAGE_peak_2_at_FOXO3_5end
|association_with_transcript=40bp_to_ENST00000406360,NM_001455,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2309 | |EntrezGene=2309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3821 | |HGNC=3821 | ||
|TSSclassifier=strong | |||
|UniProt=O43524 | |UniProt=O43524 | ||
|association_with_transcript=40bp_to_ENST00000406360,NM_001455,uc003psm.2_5end | |||
|cluster_id=chr6:108882109..108882173,+ | |||
|coexpression_cluster_id=C1047 | |||
|description=CAGE_peak_2_at_FOXO3_5end | |||
|id=chr6:108882109..108882173,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.76e-19!42;CL:0000860!3.77e-16!45;CL:0000766!1.30e-14!76;CL:0000839!1.03e-11!70;CL:0000557!7.11e-11!71;CL:0002009!3.59e-10!65;CL:0002194!1.01e-09!63;CL:0000576!1.01e-09!63;CL:0000040!1.01e-09!63;CL:0000559!1.01e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-14;33!CL:0002057;1.33e-14;33!CL:0000576;2.03e-11;48!CL:0000473;3.39e-10;39!CL:0000234;3.39e-10;39!CL:0000766;8.35e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.21e-19,42;CL:0002057,6.21e-19,42;CL:0000766,2.06e-16,72;CL:0000473,6.94e-16,48;CL:0000234,6.94e-16,48;CL:0000839,2.50e-13,66;CL:0000557,2.19e-12,67;CL:0002009,1.18e-11,61;CL:0002194,3.47e-11,59;CL:0000576,3.47e-11,59;CL:0000040,3.47e-11,59;CL:0000559,3.47e-11,59;CL:0000763,4.95e-07,108;CL:0000049,4.95e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.40e-20!659;UBERON:0000467!5.07e-18!625;UBERON:0000480!5.80e-18!626;UBERON:0000922!4.01e-17!612;UBERON:0002050!8.96e-17!605;UBERON:0005423!8.96e-17!605;UBERON:0000923!1.80e-16!604;UBERON:0005291!1.80e-16!604;UBERON:0006598!1.80e-16!604;UBERON:0002532!1.80e-16!604;UBERON:0000062!1.00e-15!511;UBERON:0007023!2.48e-14!115;UBERON:0000926!1.71e-11!448;UBERON:0004120!1.71e-11!448;UBERON:0006603!1.71e-11!448;UBERON:0002390!2.45e-10!102;UBERON:0003061!2.45e-10!102;UBERON:0000479!1.33e-09!787;UBERON:0002371!1.63e-08!80;UBERON:0002193!3.23e-08!112;UBERON:0001474!1.17e-07!86;UBERON:0004765!1.68e-07!101;UBERON:0001434!1.68e-07!101;UBERON:0002204!2.90e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,8.13e-17,592;UBERON:0005423,1.49e-15,581;UBERON:0000923,1.77e-15,560;UBERON:0010316,1.77e-15,560;UBERON:0005291,1.77e-15,560;UBERON:0006598,1.77e-15,560;UBERON:0010317,1.77e-15,560;UBERON:0002532,1.77e-15,560;UBERON:0002050,4.65e-15,564;UBERON:0007023,3.22e-14,114;UBERON:0002390,2.22e-11,98;UBERON:0003061,2.22e-11,98;UBERON:0000926,5.90e-11,315;UBERON:0004120,5.90e-11,315;UBERON:0006603,5.90e-11,315;UBERON:0000479,7.92e-10,773;UBERON:0002371,1.08e-09,76;UBERON:0002193,5.30e-09,108;UBERON:0001434,9.97e-09,100;UBERON:0001474,1.08e-08,82;UBERON:0002204,1.66e-08,167;UBERON:0004765,2.29e-08,90 | |||
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| ||
|short_description=p2@FOXO3 | |||
}} | }} |
Latest revision as of 17:32, 19 September 2015
Short description: | p2@FOXO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXO3_5end |
Coexpression cluster: | C1047_Whole_blood_CD14_Neutrophils_Eosinophils_Reticulocytes_Mast |
Association with transcript: | 40bp_to_ENST00000406360, NM_001455, uc003psm.2_5end |
EntrezGene: | FOXO3 |
HGNC: | 3821 |
UniProt: | O43524 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.21e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.21e-19 | 42 |
myeloid leukocyte | 2.06e-16 | 72 |
defensive cell | 6.94e-16 | 48 |
phagocyte | 6.94e-16 | 48 |
myeloid lineage restricted progenitor cell | 2.50e-13 | 66 |
granulocyte monocyte progenitor cell | 2.19e-12 | 67 |
macrophage dendritic cell progenitor | 1.18e-11 | 61 |
monopoietic cell | 3.47e-11 | 59 |
monocyte | 3.47e-11 | 59 |
monoblast | 3.47e-11 | 59 |
promonocyte | 3.47e-11 | 59 |
myeloid cell | 4.95e-07 | 108 |
common myeloid progenitor | 4.95e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
embryo | 8.13e-17 | 592 |
developing anatomical structure | 1.49e-15 | 581 |
germ layer | 1.77e-15 | 560 |
germ layer / neural crest | 1.77e-15 | 560 |
embryonic tissue | 1.77e-15 | 560 |
presumptive structure | 1.77e-15 | 560 |
germ layer / neural crest derived structure | 1.77e-15 | 560 |
epiblast (generic) | 1.77e-15 | 560 |
embryonic structure | 4.65e-15 | 564 |
adult organism | 3.22e-14 | 114 |
hematopoietic system | 2.22e-11 | 98 |
blood island | 2.22e-11 | 98 |
mesoderm | 5.90e-11 | 315 |
mesoderm-derived structure | 5.90e-11 | 315 |
presumptive mesoderm | 5.90e-11 | 315 |
tissue | 7.92e-10 | 773 |
bone marrow | 1.08e-09 | 76 |
hemolymphoid system | 5.30e-09 | 108 |
skeletal system | 9.97e-09 | 100 |
bone element | 1.08e-08 | 82 |
musculoskeletal system | 1.66e-08 | 167 |
skeletal element | 2.29e-08 | 90 |