FFCP PHASE1:Hg19::chr7:80548401..80548423,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10512 | |EntrezGene=10512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10725 | |HGNC=10725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000487621_5end | |association_with_transcript=74bp_to_ENST00000487621_5end | ||
|cluster_id=chr7:80548401..80548423,- | |||
|coexpression_cluster_id=C958 | |coexpression_cluster_id=C958 | ||
|description=CAGE_peak_4_at_SEMA3C_5end | |description=CAGE_peak_4_at_SEMA3C_5end | ||
|id=chr7:80548401..80548423,- | |id=chr7:80548401..80548423,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000055!1.59e-09!180 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:2394;5.07e-07;14 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.45e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.07e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.07e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!2.76e-14!659;UBERON:0000467!7.23e-13!625;UBERON:0000480!1.44e-12!626;UBERON:0000062!1.01e-10!511;UBERON:0000475!1.74e-09!365;UBERON:0002050!2.09e-09!605;UBERON:0005423!2.09e-09!605;UBERON:0000923!3.93e-09!604;UBERON:0005291!3.93e-09!604;UBERON:0006598!3.93e-09!604;UBERON:0002532!3.93e-09!604;UBERON:0000922!9.28e-09!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002050,1.80e-08,564;UBERON:0005423,1.03e-07,581;UBERON:0000923,1.71e-07,560;UBERON:0010316,1.71e-07,560;UBERON:0005291,1.71e-07,560;UBERON:0006598,1.71e-07,560;UBERON:0010317,1.71e-07,560;UBERON:0002532,1.71e-07,560;UBERON:0003102,1.82e-07,99;UBERON:0000922,2.00e-07,592 | |||
|phase1_expression=19.4395865819496,11.3473277662221,27.3451543946184,16.0117277365009,18.3254048715188,24.4254786748103,2.53299878168311,5.68547886084148,6.52964070499596,3.44027511102112,2.09340350391728,4.36882744260345,3.9565046734268,4.70312141248177,6.2965501388304,2.01697543935533,2.41077811209591,6.57279081348636,6.8310591830671,4.18611597461079,5.91602004608334,4.70182082217132,2.57612388417951,3.01123735160345,1.50651167513763,0,0,0,5.50709987588466,1.91914699048606,2.16742572642506,8.27479102031034,12.04823675113,12.5716363456708,0,0,0.293600439334847,5.53995408531877,10.4283112684474,11.0675544065084,2.91090116511902,2.91504299417082,3.60605794687861,4.07115068582781,4.91238726795452,2.91100873425379,4.64858073811369,6.98985409637104,6.50383378879718,2.3015391385772,2.81776777182011,4.7296445977717,8.27389633767885,13.5551783552603,5.41705946377367,2.44715041405386,6.27684145133045,3.14612878223118,9.48860066349798,10.5906578935111,7.03270838378945,1.64925650093358,2.99195486432448,0.852449501065388,15.9615081245721,17.5889419654253,12.4564449799115,3.01498398308092,3.65038042894141,1.3031330682307,5.44859552370032,14.362827803515,10.1267963981083,1.69004229049553,1.06302149982522,1.04829322754188,2.69588714751588,1.35159203557356,3.69668849403284,0.285012743741249,1.59133341759272,2.19196984517561,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,3.36305137788922,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0.670700859703636,1.15076305659177,74.0950262388361,10.5280961233537,30.417768981773,19.8821486762775,11.1926020169606,14.4638270261024,11.0864698731282,13.263052639662,4.84622579341537,2.18577172975525,2.96627554227544,18.8237488319716,13.9303789839414,14.758333617594,1.66943437013739,1.71598473234038,2.22874500797739,0.39752481473341,0,0,0,1.25849830862972,0.275118041940067,0.835979866147242,0,0,0.66944122552934,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,4.79703457356788,86.9700915466807,15.1956613997496,26.2170178010173,109.571589126047,12.7680617591409,6.72813120170769,2.1349799145941,4.9333509683432,5.29058760179603,6.33140158727534,1.63461903113459,3.17850598054356,4.03323147135999,1.87457145467037,2.49728061464256,1.71141546463335,2.39117888882882,2.81842796745036,3.23745888736263,2.52811452064047,6.53293348015658,2.7023549808589,4.23635702820638,10.6920257155385,4.20353779773547,4.55080680969013,2.87447256726495,1.68336113954066,2.50237039743928,4.43302584774693,6.14568669233173,3.37136575378922,6.61047459189026,3.06266894532057,28.8817313459068,18.7930502160339,11.4443226626163,30.3092007045246,17.6219824997731,45.860016128122,17.3088676388379,43.3755173860054,10.5231965574095,18.4276655198204,10.2175387492952,19.0742347046198,47.2162758047097,13.2992769660485,2.88253006927829,23.1913023795956,45.8213482592602,27.2464365619554,0,0,0.232387885739037,1.14027160516907,0,0,23.4674298494724,12.2215778256648,0,9.28735856063958,5.77503585335668,2.9576700009961,4.88895601226495,3.13314338848527,3.19852520923942,4.57546832594053,3.32178866755535,2.96628877952362,2.74710051175484,1.92373578473195,0,1.40241773803446,0.8231480226628,0,0,0,0,0,4.18160691046586,19.3871625637334,14.4870376739386,11.240175325762,5.93120937228622,12.3142632060844,1.95484983186195,3.11980435583874,12.9898207822746,4.521285794028,30.9958952782569,0,0,0,19.7551099489819,14.5942647556128,3.93947209739836,8.19014927987332,6.39113997841531,9.3733833986777,96.5897237143442,77.8345283860702,26.3302056746374,19.7631078189494,10.7347150166259,0.985326475791887,0.968532774145487,0,0.432359860250884,0.12624243342638,13.5885493785242,1.90994212779139,1.17217447210047,5.13217338068116,6.58095953301271,5.1058319833466,6.5740079505033,2.13049060256185,1.74384027533312,3.2268845761218,18.3565836376044,0,0.845302752556,10.3715865468099,3.12022310734098,0,1.41849132023278,0.799266537048298,3.0025378668211,5.42621605391443,0,3.25736184293735,3.909311436168,7.12756685640086,26.225225804184,16.5591357134056,20.7943821658679,1.2162378064119,4.01805673145701,6.32501818449095,1.4377491329495,0,9.98458335285029,18.0976633334474,12.1231030304726,19.3385840299087,0,0.788123040807709,0,0.385029108839245,0.76228387266739,11.712586847186,17.0123538811093,10.3860084507296,16.5864075429822,2.99602809578873,0,2.07207756718018,4.41689370188904,0,2.17012018959788,7.90289273817067,9.45673640624957,12.6161932027148,12.1827071592422,14.1444666872028,2.27407504055985,8.27784570340039,3.32112799267718,4.60922921354258,11.9899387965954,2.54541504701563,2.74514739048685,1.44737618286021,2.37285620900479,1.49418580924822,2.12189300012382,6.65741758041988,4.23346410661552,22.8259183193275,39.7466510816082,17.9622460437167,27.5499170899757,12.7926812266676,28.6319979635621,22.2627099667486,6.01417805830357,3.37367278094941,10.1016401896985,8.30807086693794,5.57809816607804,4.83437798366489,34.8881258327716,5.43277834721788,9.87404254215618,8.74037606432242,2.75361271414791,0.90239922581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|short_description=p4@SEMA3C | |short_description=p4@SEMA3C | ||
}} | }} |
Latest revision as of 17:24, 19 September 2015
Short description: | p4@SEMA3C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEMA3C_5end |
Coexpression cluster: | C958_Synoviocyte_Urothelial_Fibroblast_Ewing_Mallassezderived_Chondrocyte_epithelioid |
Association with transcript: | 74bp_to_ENST00000487621_5end |
EntrezGene: | SEMA3C |
HGNC: | 10725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic structure | 1.80e-08 | 564 |
developing anatomical structure | 1.03e-07 | 581 |
germ layer | 1.71e-07 | 560 |
germ layer / neural crest | 1.71e-07 | 560 |
embryonic tissue | 1.71e-07 | 560 |
presumptive structure | 1.71e-07 | 560 |
germ layer / neural crest derived structure | 1.71e-07 | 560 |
epiblast (generic) | 1.71e-07 | 560 |
surface structure | 1.82e-07 | 99 |
embryo | 2.00e-07 | 592 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.07e-07 | 14 |