FFCP PHASE1:Hg19::chr1:201331124..201331147,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7139 | |EntrezGene=7139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11949 | |HGNC=11949 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc009wzp.2_5end | |association_with_transcript=2bp_to_uc009wzp.2_5end | ||
|cluster_id=chr1:201331124..201331147,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_10_at_TNNT2_5end | |description=CAGE_peak_10_at_TNNT2_5end | ||
|id=chr1:201331124..201331147,- | |id=chr1:201331124..201331147,- | ||
|ontology_enrichment_celltype=CL:0002575;8.09e-09;2 | |ontology_enrichment_celltype=CL:0000188!1.50e-22!9;CL:0000594!1.02e-08!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002575;8.09e-09;2 | ||
|ontology_enrichment_disease=DOID:114;7.93e-32;2!DOID:178;9.58e-17;1!DOID:326;9.58e-17;1!DOID:3978;9.58e-17;1!DOID:3394;9.58e-17;1!DOID:5844;9.58e-17;1!DOID:1287;1.86e-16;4 | |ontology_enrichment_celltype_v019_2=CL:0002575,8.74e-09,2 | ||
|ontology_enrichment_uberon=UBERON:0007100;9.62e-49;25!UBERON:0004151;2.08e-46;3!UBERON:0003978;6.14e-46;3!UBERON:0000946;6.14e-46;3!UBERON:0002081;3.21e-31;2!UBERON:0002133;4.71e-31;2!UBERON:0000948;9.10e-25;22!UBERON:0002084;4.72e-17;1!UBERON:0002082;4.72e-17;1!UBERON:0002079;9.58e-17;1!UBERON:0002146;9.58e-17;1!UBERON:0005623;9.58e-17;1!UBERON:0002135;1.41e-16;1!UBERON:0007029;2.63e-16;1!UBERON:0002134;2.63e-16;1!UBERON:0005208;2.63e-16;1!UBERON:0004145;2.63e-16;1!UBERON:0005946;2.63e-16;1!UBERON:0005965;2.63e-16;1!UBERON:0002078;2.63e-16;1!UBERON:0010313;2.61e-14;10!UBERON:0003103;6.04e-10;61 | |ontology_enrichment_development_v019=UBERON:0005062;1.13e-34;4!UBERON:0007284;1.13e-34;4!UBERON:0010226;4.72e-17;1!UBERON:0000358;9.58e-17;1!UBERON:0010227;9.58e-17;1!UBERON:0004140;1.65e-16;1!UBERON:0006603;3.03e-08;65!UBERON:0003104;4.57e-08;31 | ||
|ontology_enrichment_disease=DOID:114!2.74e-13!2;DOID:178!1.86e-07!1;DOID:326!1.86e-07!1;DOID:3978!1.86e-07!1;DOID:3394!1.86e-07!1;DOID:5844!1.86e-07!1;DOID:1287!4.71e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;7.93e-32;2!DOID:178;9.58e-17;1!DOID:326;9.58e-17;1!DOID:3978;9.58e-17;1!DOID:3394;9.58e-17;1!DOID:5844;9.58e-17;1!DOID:1287;1.86e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.33e-32,2;DOID:178,8.86e-17,1;DOID:326,8.86e-17,1;DOID:3978,8.86e-17,1;DOID:3394,8.86e-17,1;DOID:5844,8.86e-17,1;DOID:1287,1.79e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.47e-20!27;UBERON:0004151!7.68e-19!3;UBERON:0003978!9.74e-19!3;UBERON:0009751!9.74e-19!3;UBERON:0000946!9.74e-19!3;UBERON:0002523!9.74e-19!3;UBERON:0005983!9.74e-19!3;UBERON:0002165!9.74e-19!3;UBERON:0002062!9.74e-19!3;UBERON:0007280!9.74e-19!3;UBERON:0002081!5.29e-13!2;UBERON:0002133!5.61e-13!2;UBERON:0000948!2.13e-11!24;UBERON:0005498!2.13e-11!24;UBERON:0004140!2.13e-11!24;UBERON:0009881!2.13e-11!24;UBERON:0004141!2.13e-11!24;UBERON:0003084!2.13e-11!24;UBERON:0007005!2.13e-11!24;UBERON:0004139!2.13e-11!24;UBERON:0004291!2.13e-11!24;UBERON:0003103!2.02e-08!69;UBERON:0002084!1.46e-07!1;UBERON:0002082!1.46e-07!1;UBERON:0004706!1.46e-07!1;UBERON:0002146!1.75e-07!1;UBERON:0005623!1.75e-07!1;UBERON:0002079!2.10e-07!1;UBERON:0002135!2.23e-07!1;UBERON:0007029!2.67e-07!1;UBERON:0002134!2.84e-07!1;UBERON:0005208!2.84e-07!1;UBERON:0005946!2.84e-07!1;UBERON:0005965!2.84e-07!1;UBERON:0002078!2.84e-07!1;UBERON:0003112!7.29e-07!1;UBERON:0000032!7.29e-07!1;UBERON:0005253!7.29e-07!1;UBERON:0003128!7.29e-07!1;UBERON:0002241!7.29e-07!1;UBERON:0001703!7.29e-07!1;UBERON:0004761!7.29e-07!1;UBERON:0009617!7.29e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.62e-49;25!UBERON:0004151;2.08e-46;3!UBERON:0003978;6.14e-46;3!UBERON:0000946;6.14e-46;3!UBERON:0002081;3.21e-31;2!UBERON:0002133;4.71e-31;2!UBERON:0000948;9.10e-25;22!UBERON:0002084;4.72e-17;1!UBERON:0002082;4.72e-17;1!UBERON:0002079;9.58e-17;1!UBERON:0002146;9.58e-17;1!UBERON:0005623;9.58e-17;1!UBERON:0002135;1.41e-16;1!UBERON:0007029;2.63e-16;1!UBERON:0002134;2.63e-16;1!UBERON:0005208;2.63e-16;1!UBERON:0004145;2.63e-16;1!UBERON:0005946;2.63e-16;1!UBERON:0005965;2.63e-16;1!UBERON:0002078;2.63e-16;1!UBERON:0010313;2.61e-14;10!UBERON:0003103;6.04e-10;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.62e-46,3;UBERON:0003978,4.87e-46,3;UBERON:0009751,4.87e-46,3;UBERON:0000946,4.87e-46,3;UBERON:0002523,4.87e-46,3;UBERON:0005983,4.87e-46,3;UBERON:0002165,4.87e-46,3;UBERON:0002062,4.87e-46,3;UBERON:0007280,4.87e-46,3;UBERON:0007100,4.18e-45,27;UBERON:0002081,4.04e-31,2;UBERON:0010227,4.04e-31,2;UBERON:0002133,4.71e-31,2;UBERON:0000948,1.07e-22,24;UBERON:0005498,1.07e-22,24;UBERON:0004140,1.07e-22,24;UBERON:0009881,1.07e-22,24;UBERON:0004141,1.07e-22,24;UBERON:0003084,1.07e-22,24;UBERON:0007005,1.07e-22,24;UBERON:0004139,1.07e-22,24;UBERON:0004291,1.07e-22,24;UBERON:0004797,3.44e-20,7;UBERON:0003103,1.61e-17,68;UBERON:0002084,4.72e-17,1;UBERON:0002082,4.72e-17,1;UBERON:0010226,4.72e-17,1;UBERON:0002146,7.57e-17,1;UBERON:0005623,7.57e-17,1;UBERON:0002079,1.21e-16,1;UBERON:0002135,1.41e-16,1;UBERON:0007029,2.25e-16,1;UBERON:0002134,2.63e-16,1;UBERON:0005208,2.63e-16,1;UBERON:0005946,2.63e-16,1;UBERON:0005965,2.63e-16,1;UBERON:0002078,2.63e-16,1;UBERON:0010313,2.44e-14,10;UBERON:0002342,2.44e-14,10;UBERON:0005062,2.44e-14,10;UBERON:0001009,2.53e-10,112;UBERON:0007023,5.35e-08,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.413509717453592,0,0.580066775656914,0.596586391912706,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7027776305341,9.8538982325024,1.43574604915363,9.78427102445056,10.3014251552777,11.3817443295355,3.09043973438941,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,9.29103924285377,21.8490350220592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0,9.38563769613817,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.413509717453592,0,0.580066775656914,0.596586391912706,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7027776305341,9.8538982325024,1.43574604915363,9.78427102445056,10.3014251552777,11.3817443295355,3.09043973438941,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,9.29103924285377,21.8490350220592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0,9.38563769613817,0,0,0,0,0 | ||
|short_description=p10@TNNT2 | |short_description=p10@TNNT2 | ||
}} | }} |
Latest revision as of 17:24, 19 September 2015
Short description: | p10@TNNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TNNT2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 2bp_to_uc009wzp.2_5end |
EntrezGene: | TNNT2 |
HGNC: | 11949 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.33e-32 | 2 |
vascular disease | 8.86e-17 | 1 |
ischemia | 8.86e-17 | 1 |
extrinsic cardiomyopathy | 8.86e-17 | 1 |
myocardial ischemia | 8.86e-17 | 1 |
myocardial infarction | 8.86e-17 | 1 |
cardiovascular system disease | 1.79e-16 | 4 |