FFCP PHASE1:Hg19::chr5:110848253..110848266,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134429 | |EntrezGene=134429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18058 | |HGNC=18058 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIC8 | |UniProt=D6RIC8 | ||
|association_with_transcript=0bp_to_ENST00000505803_5end | |association_with_transcript=0bp_to_ENST00000505803_5end | ||
|cluster_id=chr5:110848253..110848266,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_STARD4_5end | |description=CAGE_peak_4_at_STARD4_5end | ||
|id=chr5:110848253..110848266,- | |id=chr5:110848253..110848266,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.63e-09!59;UBERON:0000033!2.27e-09!123;UBERON:0003075!9.80e-09!86;UBERON:0007284!9.80e-09!86;UBERON:0000153!4.19e-08!129;UBERON:0007811!4.19e-08!129;UBERON:0002346!4.74e-08!90;UBERON:0004121!5.37e-08!169;UBERON:0000955!1.16e-07!69;UBERON:0006238!1.16e-07!69;UBERON:0000073!1.21e-07!94;UBERON:0001016!1.21e-07!94;UBERON:0000924!1.38e-07!173;UBERON:0006601!1.38e-07!173;UBERON:0001049!1.65e-07!57;UBERON:0005068!1.65e-07!57;UBERON:0006241!1.65e-07!57;UBERON:0007135!1.65e-07!57;UBERON:0005743!4.18e-07!86;UBERON:0001017!7.02e-07!82;UBERON:0003056!7.92e-07!61 | |ontology_enrichment_uberon=UBERON:0002616!1.63e-09!59;UBERON:0000033!2.27e-09!123;UBERON:0003075!9.80e-09!86;UBERON:0007284!9.80e-09!86;UBERON:0000153!4.19e-08!129;UBERON:0007811!4.19e-08!129;UBERON:0002346!4.74e-08!90;UBERON:0004121!5.37e-08!169;UBERON:0000955!1.16e-07!69;UBERON:0006238!1.16e-07!69;UBERON:0000073!1.21e-07!94;UBERON:0001016!1.21e-07!94;UBERON:0000924!1.38e-07!173;UBERON:0006601!1.38e-07!173;UBERON:0001049!1.65e-07!57;UBERON:0005068!1.65e-07!57;UBERON:0006241!1.65e-07!57;UBERON:0007135!1.65e-07!57;UBERON:0005743!4.18e-07!86;UBERON:0001017!7.02e-07!82;UBERON:0003056!7.92e-07!61 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,7.65e-09,82;UBERON:0007284,7.65e-09,82;UBERON:0002346,2.30e-08,86;UBERON:0010314,3.60e-08,132;UBERON:0001049,3.68e-08,56;UBERON:0005068,3.68e-08,56;UBERON:0006241,3.68e-08,56;UBERON:0007135,3.68e-08,56;UBERON:0000955,4.21e-08,68;UBERON:0006238,4.21e-08,68;UBERON:0000073,5.34e-08,53;UBERON:0002616,5.34e-08,53;UBERON:0003056,6.65e-08,61;UBERON:0001016,8.83e-08,89;UBERON:0004121,1.06e-07,171;UBERON:0000924,1.06e-07,171;UBERON:0006601,1.06e-07,171;UBERON:0010371,1.14e-07,104;UBERON:0001017,3.37e-07,81 | |||
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| ||
|short_description=p4@STARD4 | |short_description=p4@STARD4 | ||
}} | }} |
Latest revision as of 17:23, 19 September 2015
Short description: | p4@STARD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STARD4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000505803_5end |
EntrezGene: | STARD4 |
HGNC: | 18058 |
UniProt: | D6RIC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 7.65e-09 | 82 |
presumptive neural plate | 7.65e-09 | 82 |
neurectoderm | 2.30e-08 | 86 |
structure with developmental contribution from neural crest | 3.60e-08 | 132 |
neural tube | 3.68e-08 | 56 |
neural rod | 3.68e-08 | 56 |
future spinal cord | 3.68e-08 | 56 |
neural keel | 3.68e-08 | 56 |
brain | 4.21e-08 | 68 |
future brain | 4.21e-08 | 68 |
regional part of nervous system | 5.34e-08 | 53 |
regional part of brain | 5.34e-08 | 53 |
pre-chordal neural plate | 6.65e-08 | 61 |
nervous system | 8.83e-08 | 89 |
ectoderm-derived structure | 1.06e-07 | 171 |
ectoderm | 1.06e-07 | 171 |
presumptive ectoderm | 1.06e-07 | 171 |
ecto-epithelium | 1.14e-07 | 104 |
central nervous system | 3.37e-07 | 81 |