FFCP PHASE1:Hg19::chr2:206547166..206547186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8828 | |EntrezGene=8828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8005 | |HGNC=8005 | ||
|TSSclassifier=strong | |||
|UniProt=E9PF66,O60462,F5H1G4,F5H2X3,Q7LBX6,Q7Z3T9,Q9H2E2,Q7LBX7 | |UniProt=E9PF66,O60462,F5H1G4,F5H2X3,Q7LBX6,Q7Z3T9,Q9H2E2,Q7LBX7 | ||
|association_with_transcript=-37bp_to_ENST00000355117,ENST00000360409,ENST00000540178,ENST00000540841,NM_003872,NM_018534,NM_201264,NM_201266,NM_201267,NM_201279,uc002vat.2,uc002vau.2,uc002vav.2,uc002vaw.2,uc002vax.2,uc002vay.2_5end | |association_with_transcript=-37bp_to_ENST00000355117,ENST00000360409,ENST00000540178,ENST00000540841,NM_003872,NM_018534,NM_201264,NM_201266,NM_201267,NM_201279,uc002vat.2,uc002vau.2,uc002vav.2,uc002vaw.2,uc002vax.2,uc002vay.2_5end | ||
|cluster_id=chr2:206547166..206547186,+ | |||
|coexpression_cluster_id=C4174 | |coexpression_cluster_id=C4174 | ||
|description=CAGE_peak_2_at_NRP2_5end | |description=CAGE_peak_2_at_NRP2_5end | ||
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|ontology_enrichment_celltype=CL:0000115!2.05e-11!35;CL:0000557!5.53e-11!71;CL:0002078!1.68e-10!44;CL:0000220!2.02e-10!246;CL:0002009!2.40e-10!65;CL:0000222!2.71e-10!119;CL:0002194!3.40e-10!63;CL:0000576!3.40e-10!63;CL:0000040!3.40e-10!63;CL:0000559!3.40e-10!63;CL:0002321!3.42e-10!248;CL:0000839!3.52e-10!70;CL:0002057!2.25e-09!42;CL:0000213!3.21e-09!57;CL:0000215!3.21e-09!57;CL:0002139!8.67e-09!24;CL:0000860!1.15e-07!45;CL:0000766!1.69e-07!76;CL:0000055!2.66e-07!180 | |ontology_enrichment_celltype=CL:0000115!2.05e-11!35;CL:0000557!5.53e-11!71;CL:0002078!1.68e-10!44;CL:0000220!2.02e-10!246;CL:0002009!2.40e-10!65;CL:0000222!2.71e-10!119;CL:0002194!3.40e-10!63;CL:0000576!3.40e-10!63;CL:0000040!3.40e-10!63;CL:0000559!3.40e-10!63;CL:0002321!3.42e-10!248;CL:0000839!3.52e-10!70;CL:0002057!2.25e-09!42;CL:0000213!3.21e-09!57;CL:0000215!3.21e-09!57;CL:0002139!8.67e-09!24;CL:0000860!1.15e-07!45;CL:0000766!1.69e-07!76;CL:0000055!2.66e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.85e-13;39!CL:0000234;6.85e-13;39!CL:0000860;3.45e-12;33!CL:0002057;3.45e-12;33!CL:0000115;6.13e-10;36!CL:0002139;8.96e-09;24!CL:0002078;1.29e-07;45 | |ontology_enrichment_celltype_v019=CL:0000473;6.85e-13;39!CL:0000234;6.85e-13;39!CL:0000860;3.45e-12;33!CL:0002057;3.45e-12;33!CL:0000115;6.13e-10;36!CL:0002139;8.96e-09;24!CL:0002078;1.29e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.82e-12,48;CL:0000234,2.82e-12,48;CL:0000557,4.71e-12,67;CL:0000115,8.70e-12,36;CL:0002009,2.23e-11,61;CL:0000839,3.03e-11,66;CL:0002194,3.08e-11,59;CL:0000576,3.08e-11,59;CL:0000040,3.08e-11,59;CL:0000559,3.08e-11,59;CL:0002078,6.34e-11,45;CL:0000222,1.15e-10,121;CL:0002321,1.81e-10,250;CL:0000213,1.93e-09,58;CL:0000215,1.93e-09,58;CL:0000860,2.40e-09,42;CL:0002057,2.40e-09,42;CL:0002139,7.85e-09,24;CL:0000766,2.13e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-07;42 | |ontology_enrichment_development_v019=CL:0002057;1.52e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!7.28e-16!625;UBERON:0000480!1.24e-15!626;UBERON:0000468!2.72e-15!659;UBERON:0000922!2.58e-12!612;UBERON:0002050!2.76e-12!605;UBERON:0005423!2.76e-12!605;UBERON:0000923!4.40e-12!604;UBERON:0005291!4.40e-12!604;UBERON:0006598!4.40e-12!604;UBERON:0002532!4.40e-12!604;UBERON:0003081!2.85e-10!216;UBERON:0001474!8.06e-10!86;UBERON:0002204!1.31e-09!167;UBERON:0002371!1.76e-09!80;UBERON:0002049!1.80e-09!79;UBERON:0007798!1.80e-09!79;UBERON:0000055!3.91e-09!69;UBERON:0004765!1.33e-08!101;UBERON:0001434!1.33e-08!101;UBERON:0000062!2.63e-08!511;UBERON:0002405!4.26e-08!115;UBERON:0001981!1.04e-07!60;UBERON:0007500!1.04e-07!60;UBERON:0004537!1.04e-07!60;UBERON:0006965!1.04e-07!60;UBERON:0003914!1.56e-07!118;UBERON:0000926!1.73e-07!448;UBERON:0004120!1.73e-07!448;UBERON:0006603!1.73e-07!448 | |ontology_enrichment_uberon=UBERON:0000467!7.28e-16!625;UBERON:0000480!1.24e-15!626;UBERON:0000468!2.72e-15!659;UBERON:0000922!2.58e-12!612;UBERON:0002050!2.76e-12!605;UBERON:0005423!2.76e-12!605;UBERON:0000923!4.40e-12!604;UBERON:0005291!4.40e-12!604;UBERON:0006598!4.40e-12!604;UBERON:0002532!4.40e-12!604;UBERON:0003081!2.85e-10!216;UBERON:0001474!8.06e-10!86;UBERON:0002204!1.31e-09!167;UBERON:0002371!1.76e-09!80;UBERON:0002049!1.80e-09!79;UBERON:0007798!1.80e-09!79;UBERON:0000055!3.91e-09!69;UBERON:0004765!1.33e-08!101;UBERON:0001434!1.33e-08!101;UBERON:0000062!2.63e-08!511;UBERON:0002405!4.26e-08!115;UBERON:0001981!1.04e-07!60;UBERON:0007500!1.04e-07!60;UBERON:0004537!1.04e-07!60;UBERON:0006965!1.04e-07!60;UBERON:0003914!1.56e-07!118;UBERON:0000926!1.73e-07!448;UBERON:0004120!1.73e-07!448;UBERON:0006603!1.73e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p2@NRP2 | |short_description=p2@NRP2 | ||
}} | }} |
Latest revision as of 17:01, 19 September 2015
Short description: | p2@NRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRP2_5end |
Coexpression cluster: | C4174_Endothelial_mesenchymal_epithelioid_Hepatic_migratory_Neural_Mast |
Association with transcript: | -37bp_to_ENST00000355117, ENST00000360409, ENST00000540178, ENST00000540841, NM_003872, NM_018534, NM_201264, NM_201266, NM_201267, NM_201279, uc002vat.2, uc002vau.2, uc002vav.2, uc002vaw.2, uc002vax.2, uc002vay.2_5end |
EntrezGene: | NRP2 |
HGNC: | 8005 |
UniProt: | E9PF66O60462F5H1G4F5H2X3Q7LBX6Q7Z3T9Q9H2E2Q7LBX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.82e-12 | 48 |
phagocyte | 2.82e-12 | 48 |
granulocyte monocyte progenitor cell | 4.71e-12 | 67 |
endothelial cell | 8.70e-12 | 36 |
macrophage dendritic cell progenitor | 2.23e-11 | 61 |
myeloid lineage restricted progenitor cell | 3.03e-11 | 66 |
monopoietic cell | 3.08e-11 | 59 |
monocyte | 3.08e-11 | 59 |
monoblast | 3.08e-11 | 59 |
promonocyte | 3.08e-11 | 59 |
meso-epithelial cell | 6.34e-11 | 45 |
mesodermal cell | 1.15e-10 | 121 |
embryonic cell | 1.81e-10 | 250 |
lining cell | 1.93e-09 | 58 |
barrier cell | 1.93e-09 | 58 |
classical monocyte | 2.40e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.40e-09 | 42 |
endothelial cell of vascular tree | 7.85e-09 | 24 |
myeloid leukocyte | 2.13e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 2.00e-13 | 581 |
embryonic structure | 1.97e-12 | 564 |
embryo | 2.90e-12 | 592 |
germ layer | 4.98e-12 | 560 |
germ layer / neural crest | 4.98e-12 | 560 |
embryonic tissue | 4.98e-12 | 560 |
presumptive structure | 4.98e-12 | 560 |
germ layer / neural crest derived structure | 4.98e-12 | 560 |
epiblast (generic) | 4.98e-12 | 560 |
bone element | 1.09e-10 | 82 |
mesoderm | 2.01e-10 | 315 |
mesoderm-derived structure | 2.01e-10 | 315 |
presumptive mesoderm | 2.01e-10 | 315 |
bone marrow | 2.18e-10 | 76 |
immune system | 6.91e-10 | 93 |
musculoskeletal system | 8.88e-10 | 167 |
skeletal element | 2.12e-09 | 90 |
vasculature | 3.78e-09 | 78 |
vascular system | 3.78e-09 | 78 |
lateral plate mesoderm | 5.40e-09 | 203 |
vessel | 8.42e-09 | 68 |
skeletal system | 1.22e-08 | 100 |
epithelial tube open at both ends | 2.23e-07 | 59 |
blood vessel | 2.23e-07 | 59 |
blood vasculature | 2.23e-07 | 59 |
vascular cord | 2.23e-07 | 59 |
epithelial tube | 2.25e-07 | 117 |
simple squamous epithelium | 9.56e-07 | 22 |