FFCP PHASE1:Hg19::chr6:108278456..108278473,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:108278456..108278473,-
|short_description=p7@SEC63
|description=CAGE_peak_7_at_SEC63_5end
|association_with_transcript=70bp_to_ENST00000429168_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11231 | |EntrezGene=11231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21082 | |HGNC=21082 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVC9 | |UniProt=A6PVC9 | ||
|association_with_transcript=70bp_to_ENST00000429168_5end | |||
|cluster_id=chr6:108278456..108278473,- | |||
|description=CAGE_peak_7_at_SEC63_5end | |||
|id=chr6:108278456..108278473,- | |||
|ontology_enrichment_celltype=CL:0000048!3.72e-11!430;CL:0000057!6.97e-11!75;CL:0000723!2.05e-10!436;CL:0000034!6.66e-10!444;CL:0000144!3.23e-09!625;CL:0002320!4.60e-09!365;CL:0000055!2.06e-08!180;CL:0000134!3.33e-08!358;CL:0002371!5.31e-08!591;CL:0000012!8.43e-08!682;CL:0002620!1.99e-07!23;CL:0000548!2.11e-07!679;CL:0000004!2.11e-07!679;CL:0000255!2.11e-07!679;CL:0000219!5.70e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.28e-09;23!CL:1000306;2.77e-08;4!CL:0002547;2.77e-08;4!CL:0002334;6.72e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.78e-13,361;CL:0000134,1.01e-12,354;CL:0000048,1.09e-11,427;CL:0000034,2.72e-11,441;CL:0000723,3.09e-11,433;CL:0000219,4.74e-11,386;CL:0000057,9.58e-10,76;CL:0002620,2.50e-09,23;CL:1000306,3.69e-08,4;CL:0002547,3.69e-08,4;CL:0002334,7.64e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.19e-08!31;DOID:1240!1.97e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.85e-12;31!DOID:1240;5.74e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.34e-12,31;DOID:1240,5.97e-09,39;DOID:2531,6.81e-07,51;DOID:0060083,6.81e-07,51;DOID:17,7.26e-07,5;DOID:450,7.26e-07,5;DOID:66,7.26e-07,5;DOID:423,7.26e-07,5;DOID:0080000,7.26e-07,5;DOID:11722,7.26e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.11e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.59e-09;9!UBERON:0000042;1.59e-09;9!UBERON:0004797;2.77e-08;4!UBERON:0000415;2.77e-08;4!UBERON:0007240;2.77e-08;4!UBERON:0005742;2.77e-08;4!UBERON:0005734;2.77e-08;4!UBERON:0004664;2.77e-08;4!UBERON:0004663;2.77e-08;4!UBERON:0003688;5.11e-08;6!UBERON:0002358;5.11e-08;6!UBERON:0003684;5.11e-08;6!UBERON:0001178;5.11e-08;6!UBERON:0003104;6.15e-07;7!UBERON:0009142;6.15e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.59e-13,371;UBERON:0003688,3.48e-08,6;UBERON:0002358,3.48e-08,6;UBERON:0003684,3.48e-08,6;UBERON:0001178,3.48e-08,6;UBERON:0000415,3.69e-08,4;UBERON:0007240,3.69e-08,4;UBERON:0005742,3.69e-08,4;UBERON:0005734,3.69e-08,4;UBERON:0004664,3.69e-08,4;UBERON:0004663,3.69e-08,4;UBERON:0004457,2.98e-07,12;UBERON:0000042,2.98e-07,12 | |||
|phase1_expression=2.90685406832891,0.428201047781966,2.53717927372748,0,1.78784437770915,5.23403114460221,0,0.631719873426831,0.261185628199839,0,0,0,0,1.11389717664042,0.331397375727916,2.01697543935533,0.602694528023977,0,1.95173119516203,0,0,0,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,1.17440175733939,1.10799081706375,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,3.92355994087075,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0.445641827540694,0.294605907474837,0,0,0,0,0.164437904603676,0,0.579606171470105,0.296573126324121,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0.895037932904712,2.1686349143074,0.50133791063589,1.30361867064741,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,1.19245312152671,1.14398982156026,0,0.993812036833525,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0.208994966536811,0.516833518338658,0,0,0,1.52054421143703,0.24406205754817,0.735326160691737,0,0.714397826272638,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0.993943903390637,1.51956613997496,2.1185468930115,3.15520282823695,1.06400514659507,0,0,0.49333509683432,1.55605517699883,0.808264032418128,0.490385709340376,0.605429710579726,0.576175924479999,0,0,0.570471821544449,1.04614076386261,0.117434498643765,0.647491777472526,0,0.408308342509787,0.245668634623536,0.723280468230358,2.37600571456411,0.494533858557114,0,0,0.168336113954066,0,0.554128230968366,0.877955241761676,0.612975591598039,0.150238058906597,0.226864366320042,1.4351170855109,1.49490172172997,3.17897851739343,0.600182192168805,2.88547081867629,1.28820270022815,1.48893485065272,1.18143432568886,0.974370051611986,0.757301322732344,1.93304787148829,2.7479829659198,1.42003837006646,0.705264687593482,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,2.20731549707325,0,0.514703430895577,0,0,0,0.370353780634118,0,0,0,0.231860809950154,1.17408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.738651018262192,0,0.743155811443641,0,0,0,0.716468181622786,0,0,1.97065295158377,0.352193736052904,0.829312462163088,0.288239906833923,0,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0,0.571652865261156,0.224262168690721,0,0.51336800074665,1.16344544182,0,0,1.32969058292435,1.04007436911366,0,0,0.532844358032199,0.857867961948885,1.08524321078289,0,0.325736184293735,1.42156779497018,0,0.602878754119172,0,0.599837947092342,0,0,0,1.4377491329495,4.59447743336456,0,0.723906533337896,0.821905290201534,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0,1.10422342547226,0.500170521059677,0.542530047399471,1.03985430765404,1.24900292158013,1.73472656537328,0.585707074963566,0.300946099727719,0,2.0694614258501,0,0,1.39013783148933,0,0.343143423810856,0,0.215714200818617,0,0,0,0,3.96972492510043,1.99500565274481,1.12264037773229,3.33161788064823,1.02341449813341,1.93024705372329,0,0.154209693802656,0.710246901252508,0.657017248110473,1.03850885836724,0,0,0.200506470303285,0,0.574072240823034,0.546273504020151,0.655622074797121,0,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,4.82051789532479,1.45006077438183,0.154048617114644,0.307007349452259,0.137836572484531,0.859361958946189,0.435050081742686,0.340906509664404,0.890320356467374,0.826424576804891,0.768760269460425,0.127612712494584,0,1.39453664789186,4.40737285562896,0,0.924100740528266,0.532306030317022,0,0.37064843820784,1.00187420719394,0,0.316379424718726,0,0,0,0.636406495851874,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0.9554993798559,0.989838023675989,0,0,0,1.31535265576129,0,0,0.202910376962704,0,0,0.860468113224309,0.785992328104969,0.35667105148125,0.354761064070598,1.89996871767898,1.97576935775941,0.75894634753143,0,0.192444225451024,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721346064882224,0.782560276832555,0.956557636372934,0.199579371432817,1.34053759092657,2.75175657541048,0.324621940274555,0.842391534340376,0.228234679033192,0.313359791546046,5.01268954180134,0.338583555603207,0.802940375518498,1.00899853595524,0.851692475380653,1.03051603426729,3.99412993600995,5.36822658941798,2.83643540910244,0.586164286206121,0,0,1.08182271390393,2.33150377598474,1.4098700508785,0,0.73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|phase1_expression=2.90685406832891,0.428201047781966,2.53717927372748,0,1.78784437770915,5.23403114460221,0,0.631719873426831,0.261185628199839,0,0,0,0,1.11389717664042,0.331397375727916,2.01697543935533,0.602694528023977,0,1.95173119516203,0,0,0,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,0,0.383829398097213,0.154816123316076,0,0,0,0.0774672005803016,0.142169232487422,1.17440175733939,1.10799081706375,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.376484679085209,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,3.92355994087075,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0.445641827540694,0.294605907474837,0,0,0,0,0.164437904603676,0,0.579606171470105,0.296573126324121,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0.895037932904712,2.1686349143074,0.50133791063589,1.30361867064741,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,1.19245312152671,1.14398982156026,0,0.993812036833525,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0.208994966536811,0.516833518338658,0,0,0,1.52054421143703,0.24406205754817,0.735326160691737,0,0.714397826272638,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0.993943903390637,1.51956613997496,2.1185468930115,3.15520282823695,1.06400514659507,0,0,0.49333509683432,1.55605517699883,0.808264032418128,0.490385709340376,0.605429710579726,0.576175924479999,0,0,0.570471821544449,1.04614076386261,0.117434498643765,0.647491777472526,0,0.408308342509787,0.245668634623536,0.723280468230358,2.37600571456411,0.494533858557114,0,0,0.168336113954066,0,0.554128230968366,0.877955241761676,0.612975591598039,0.150238058906597,0.226864366320042,1.4351170855109,1.49490172172997,3.17897851739343,0.600182192168805,2.88547081867629,1.28820270022815,1.48893485065272,1.18143432568886,0.974370051611986,0.757301322732344,1.93304787148829,2.7479829659198,1.42003837006646,0.705264687593482,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,1.26755034821831,0,0,2.20731549707325,0,0.514703430895577,0,0,0,0.370353780634118,0,0,0,0.231860809950154,1.17408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.738651018262192,0,0.743155811443641,0,0,0,0.716468181622786,0,0,1.97065295158377,0.352193736052904,0.829312462163088,0.288239906833923,0,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0,0.571652865261156,0.224262168690721,0,0.51336800074665,1.16344544182,0,0,1.32969058292435,1.04007436911366,0,0,0.532844358032199,0.857867961948885,1.08524321078289,0,0.325736184293735,1.42156779497018,0,0.602878754119172,0,0.599837947092342,0,0,0,1.4377491329495,4.59447743336456,0,0.723906533337896,0.821905290201534,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0.749007023947182,0,0,1.10422342547226,0.500170521059677,0.542530047399471,1.03985430765404,1.24900292158013,1.73472656537328,0.585707074963566,0.300946099727719,0,2.0694614258501,0,0,1.39013783148933,0,0.343143423810856,0,0.215714200818617,0,0,0,0,3.96972492510043,1.99500565274481,1.12264037773229,3.33161788064823,1.02341449813341,1.93024705372329,0,0.154209693802656,0.710246901252508,0.657017248110473,1.03850885836724,0,0,0.200506470303285,0,0.574072240823034,0.546273504020151,0.655622074797121,0,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,4.82051789532479,1.45006077438183,0.154048617114644,0.307007349452259,0.137836572484531,0.859361958946189,0.435050081742686,0.340906509664404,0.890320356467374,0.826424576804891,0.768760269460425,0.127612712494584,0,1.39453664789186,4.40737285562896,0,0.924100740528266,0.532306030317022,0,0.37064843820784,1.00187420719394,0,0.316379424718726,0,0,0,0.636406495851874,0,0.359744915166629,0,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0.9554993798559,0.989838023675989,0,0,0,1.31535265576129,0,0,0.202910376962704,0,0,0.860468113224309,0.785992328104969,0.35667105148125,0.354761064070598,1.89996871767898,1.97576935775941,0.75894634753143,0,0.192444225451024,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721346064882224,0.782560276832555,0.956557636372934,0.199579371432817,1.34053759092657,2.75175657541048,0.324621940274555,0.842391534340376,0.228234679033192,0.313359791546046,5.01268954180134,0.338583555603207,0.802940375518498,1.00899853595524,0.851692475380653,1.03051603426729,3.99412993600995,5.36822658941798,2.83643540910244,0.586164286206121,0,0,1.08182271390393,2.33150377598474,1.4098700508785,0,0.73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| ||
|short_description=p7@SEC63 | |||
}} | }} |
Latest revision as of 16:59, 19 September 2015
Short description: | p7@SEC63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SEC63_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000429168_5end |
EntrezGene: | SEC63 |
HGNC: | 21082 |
UniProt: | A6PVC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.78e-13 | 361 |
mesenchymal cell | 1.01e-12 | 354 |
multi fate stem cell | 1.09e-11 | 427 |
stem cell | 2.72e-11 | 441 |
somatic stem cell | 3.09e-11 | 433 |
motile cell | 4.74e-11 | 386 |
fibroblast | 9.58e-10 | 76 |
skin fibroblast | 2.50e-09 | 23 |
fibroblast of tunica adventitia of artery | 3.69e-08 | 4 |
fibroblast of the aortic adventitia | 3.69e-08 | 4 |
preadipocyte | 7.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.59e-13 | 371 |
omentum | 3.48e-08 | 6 |
peritoneum | 3.48e-08 | 6 |
abdominal cavity | 3.48e-08 | 6 |
visceral peritoneum | 3.48e-08 | 6 |
artery wall | 3.69e-08 | 4 |
tunica adventitia of artery | 3.69e-08 | 4 |
adventitia | 3.69e-08 | 4 |
tunica adventitia of blood vessel | 3.69e-08 | 4 |
aorta tunica adventitia | 3.69e-08 | 4 |
aorta wall | 3.69e-08 | 4 |
cavity lining | 2.98e-07 | 12 |
serous membrane | 2.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.34e-12 | 31 |
leukemia | 5.97e-09 | 39 |
hematologic cancer | 6.81e-07 | 51 |
immune system cancer | 6.81e-07 | 51 |
musculoskeletal system disease | 7.26e-07 | 5 |
myotonic disease | 7.26e-07 | 5 |
muscle tissue disease | 7.26e-07 | 5 |
myopathy | 7.26e-07 | 5 |
muscular disease | 7.26e-07 | 5 |
myotonic dystrophy | 7.26e-07 | 5 |