FFCP PHASE1:Hg19::chr6:108145461..108145470,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:108145461..108145470,- to FFCP PHASE1:Hg19::chr6:108145461..108145470,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=256380 | |EntrezGene=256380 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21397 | |HGNC=21397 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2X1 | |UniProt=F2Z2X1 | ||
|association_with_transcript=19bp_to_ENST00000426221_5end | |||
|cluster_id=chr6:108145461..108145470,- | |||
|description=CAGE_peak_8_at_SCML4_5end | |||
|id=chr6:108145461..108145470,- | |||
|ontology_enrichment_celltype=CL:0000542!3.26e-39!53;CL:0000051!3.26e-39!53;CL:0000838!1.64e-37!52;CL:0000791!1.81e-27!18;CL:0000789!1.81e-27!18;CL:0002420!1.81e-27!18;CL:0002419!1.81e-27!18;CL:0000790!1.81e-27!18;CL:0002087!1.04e-25!119;CL:0000738!2.13e-23!140;CL:0000236!2.62e-19!14;CL:0002031!5.11e-19!124;CL:0000625!1.47e-18!11;CL:0000084!2.14e-18!25;CL:0000827!2.14e-18!25;CL:0000037!2.65e-17!172;CL:0000566!2.65e-17!172;CL:0002032!1.13e-15!165;CL:0000837!1.13e-15!165;CL:0000988!1.42e-15!182;CL:0000945!2.40e-15!24;CL:0000826!2.40e-15!24;CL:0000624!5.51e-09!6;CL:0000623!3.39e-07!3;CL:0000825!3.39e-07!3;CL:0000767!6.87e-07!3;CL:0000842!7.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.16e-34;18!CL:0000789;2.16e-34;18!CL:0002419;2.16e-34;18!CL:0000625;3.02e-28;11!CL:0000084;2.73e-24;25!CL:0000542;1.40e-21;53!CL:0000236;8.42e-13;13!CL:0000624;2.49e-10;6!CL:0000623;1.86e-09;3!CL:0002087;1.87e-09;104!CL:0000817;2.89e-08;1!CL:0000945;8.12e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.34e-36,53;CL:0000051,2.34e-36,53;CL:0000791,2.11e-34,18;CL:0000789,2.11e-34,18;CL:0002420,2.11e-34,18;CL:0002419,2.11e-34,18;CL:0000790,2.11e-34,18;CL:0000838,5.80e-33,52;CL:0000625,1.93e-28,11;CL:0000084,2.68e-24,25;CL:0000827,2.68e-24,25;CL:0002087,1.87e-16,115;CL:0000738,5.14e-15,136;CL:0002031,3.36e-12,120;CL:0000236,6.87e-12,14;CL:0000037,2.08e-11,168;CL:0002032,9.81e-11,161;CL:0000837,9.81e-11,161;CL:0000988,1.25e-10,177;CL:0000624,3.44e-10,6;CL:0000623,1.44e-09,3;CL:0000825,1.44e-09,3;CL:0000945,7.93e-07,24;CL:0000826,7.93e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.16e-34;18!CL:0000051;1.40e-21;53!UBERON:0006298;1.04e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.04e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,8.51e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.52e-09!7;UBERON:0002370!4.74e-08!4;UBERON:0005058!4.74e-08!4;UBERON:0009113!4.74e-08!4;UBERON:0003295!4.74e-08!4;UBERON:0005562!4.74e-08!4;UBERON:0000178!1.85e-07!15;UBERON:0000179!1.85e-07!15;UBERON:0000463!1.85e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;1.04e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,1.04e-07,1;UBERON:0006298,1.04e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,1.53531759238885,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,3.27683166757279,1.77901850772711,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,2.27685187643779,0.587237189370939,2.29363936875137,0,0,0,2.55722701147983,0.786021525498329,1.02800749499755,0.167186495390678,1.30368906653436,0,3.89653456815823,0.334231370655521,0,0.221533894583621,0.541607727530031,0.128091319725675,0,0.986627427622057,0.829050053357545,1.15921234294021,1.63115219478266,2.94294910898684,1.04535523804977,0,0.766440987203842,0.34362744548263,1.26509846009751,0.637130828648193,2.60433381542567,0.950452044448374,2.40920190524436,1.4078527226986,0,1.65744076430812,2.46338399076314,1.81446068902259,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.591092280605782,1.50939302401662,1.41177339907723,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,1.19115887728894,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,0,1.48642540100575,3.75099953738757,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0.230467975111559,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.709036767709349,0,0,0,0,0,1.37618785021362,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,1.24149428591716,0,0,0,0,0,0.740872583160463,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,1.53531759238885,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,3.27683166757279,1.77901850772711,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,2.27685187643779,0.587237189370939,2.29363936875137,0,0,0,2.55722701147983,0.786021525498329,1.02800749499755,0.167186495390678,1.30368906653436,0,3.89653456815823,0.334231370655521,0,0.221533894583621,0.541607727530031,0.128091319725675,0,0.986627427622057,0.829050053357545,1.15921234294021,1.63115219478266,2.94294910898684,1.04535523804977,0,0.766440987203842,0.34362744548263,1.26509846009751,0.637130828648193,2.60433381542567,0.950452044448374,2.40920190524436,1.4078527226986,0,1.65744076430812,2.46338399076314,1.81446068902259,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.591092280605782,1.50939302401662,1.41177339907723,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,1.19115887728894,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,0,1.48642540100575,3.75099953738757,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0.230467975111559,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0.709036767709349,0,0,0,0,0,1.37618785021362,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,1.24149428591716,0,0,0,0,0,0.740872583160463,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | ||
|short_description=p8@SCML4 | |||
}} | }} |
Latest revision as of 16:51, 19 September 2015
Short description: | p8@SCML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SCML4_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000426221_5end |
EntrezGene: | SCML4 |
HGNC: | 21397 |
UniProt: | F2Z2X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.34e-36 | 53 |
common lymphoid progenitor | 2.34e-36 | 53 |
mature alpha-beta T cell | 2.11e-34 | 18 |
alpha-beta T cell | 2.11e-34 | 18 |
immature T cell | 2.11e-34 | 18 |
mature T cell | 2.11e-34 | 18 |
immature alpha-beta T cell | 2.11e-34 | 18 |
lymphoid lineage restricted progenitor cell | 5.80e-33 | 52 |
CD8-positive, alpha-beta T cell | 1.93e-28 | 11 |
T cell | 2.68e-24 | 25 |
pro-T cell | 2.68e-24 | 25 |
nongranular leukocyte | 1.87e-16 | 115 |
leukocyte | 5.14e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.36e-12 | 120 |
B cell | 6.87e-12 | 14 |
hematopoietic stem cell | 2.08e-11 | 168 |
hematopoietic oligopotent progenitor cell | 9.81e-11 | 161 |
hematopoietic multipotent progenitor cell | 9.81e-11 | 161 |
hematopoietic cell | 1.25e-10 | 177 |
CD4-positive, alpha-beta T cell | 3.44e-10 | 6 |
natural killer cell | 1.44e-09 | 3 |
pro-NK cell | 1.44e-09 | 3 |
lymphocyte of B lineage | 7.93e-07 | 24 |
pro-B cell | 7.93e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 1.04e-07 | 1 |
submandibular gland primordium | 1.04e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 8.51e-08 | 1 |