FFCP PHASE1:Hg19::chr3:79817162..79817175,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=6091 | |EntrezGene=6091 | ||
| Line 8: | Line 8: | ||
|UniProt=Q9Y6N7 | |UniProt=Q9Y6N7 | ||
|association_with_transcript=-103bp_to_NM_002941,uc003dqe.2_5end | |association_with_transcript=-103bp_to_NM_002941,uc003dqe.2_5end | ||
|cluster_id=chr3:79817162..79817175,- | |||
|coexpression_cluster_id=C2754 | |coexpression_cluster_id=C2754 | ||
|description=CAGE_peak_6_at_ROBO1_5end | |description=CAGE_peak_6_at_ROBO1_5end | ||
Latest revision as of 16:51, 19 September 2015
| Short description: | p6@ROBO1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_ROBO1_5end |
| Coexpression cluster: | C2754_temporal_duodenum_nonsmall_occipital_parietal_Nucleus_putamen |
| Association with transcript: | -103bp_to_NM_002941, uc003dqe.2_5end |
| EntrezGene: | ROBO1 |
| HGNC: | 10249 |
| UniProt: | Q9Y6N7 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p6@ROBO1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| smooth muscle cell of the brain vasculature | 2.39e-13 | 3 |
| annulus pulposus cell | 7.90e-10 | 2 |
| fibroblast of choroid plexus | 4.53e-09 | 2 |
| nucleus pulposus cell of intervertebral disc | 4.09e-07 | 3 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 9.56e-31 | 81 |
| nervous system | 1.69e-29 | 89 |
| brain | 3.75e-29 | 68 |
| future brain | 3.75e-29 | 68 |
| neural tube | 4.95e-25 | 56 |
| neural rod | 4.95e-25 | 56 |
| future spinal cord | 4.95e-25 | 56 |
| neural keel | 4.95e-25 | 56 |
| regional part of nervous system | 2.84e-21 | 53 |
| regional part of brain | 2.84e-21 | 53 |
Showing 1 to 10 of 93 entries
