FFCP PHASE1:Hg19::chr2:20647862..20647881,+: Difference between revisions
From FANTOM5_SSTAR
m moved FFCP PHASE1 hg19::chr2:20647862..20647881,+ to FFCP PHASE1:Hg19::chr2:20647862..20647881,+: NSchange |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388 | |EntrezGene=388 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=668 | |HGNC=668 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4F6 | |UniProt=Q7Z4F6 | ||
|association_with_transcript=-466bp_to_AF171089_5end | |||
|cluster_id=chr2:20647862..20647881,+ | |||
|coexpression_cluster_id=C830 | |||
|description=CAGE_peak_4_at_RHOB_5end | |||
|id=chr2:20647862..20647881,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.81e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.61e-15;13!CL:0002521;1.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.92e-13,15;CL:0002521,1.20e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.93e-14!115;UBERON:0004111!5.13e-09!241;UBERON:0000477!4.46e-08!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.91e-09;4!UBERON:0003101;3.79e-08;22!UBERON:0000079;3.79e-08;22!UBERON:0006947;7.69e-08;3!UBERON:0004054;7.69e-08;3!UBERON:0002190;1.10e-07;3!UBERON:0004457;1.52e-07;9!UBERON:0000042;1.52e-07;9!UBERON:0002072;2.04e-07;5!UBERON:0003135;3.97e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.41e-11,114;UBERON:0005904,1.17e-09,4;UBERON:0003064,1.30e-08,28;UBERON:0003101,3.38e-08,22;UBERON:0000079,3.38e-08,22;UBERON:0006947,5.96e-08,3;UBERON:0004054,5.96e-08,3;UBERON:0002190,1.20e-07,3;UBERON:0002072,2.00e-07,5;UBERON:0003135,3.15e-07,11;UBERON:0004876,5.83e-07,11 | |||
|phase1_expression=1.63510541343501,2.14100523890983,1.40954404095971,0,2.23480547213644,0.872338524100369,2.53299878168311,5.05375898741465,2.08948502559871,0,0,0,0.527533956456907,0.618831764800233,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.422510572623884,0.850417199860174,0.209658645508376,0.336985893439485,0.150176892841506,0.16072558669708,0.285012743741249,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0,0.722878304769133,1.00267582127178,2.02785126545153,0,0.973269740605272,0,0.221729397462564,0.351339142772504,0.654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,4.19499436209906,3.85165258716094,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,4.43112248820062,0,6.10155143870424,0.367663080345869,8.91156142669936,0.267899184852239,0,0.112611480483322,1.53316637465883,0,0.732806975721629,0,0,0.872188104285069,0.496971951695318,0.379891534993739,0,0.286836620748814,0,0,2.1349799145941,1.97334038733728,0,0.134710672069688,0,0,0,0,0.624320153660641,0.570471821544449,0.448346041655403,0,0,0,0.204154171254893,0,0,0,1.7308685049499,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,0,0.427114777637135,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.57978255948989,0,0,0,0.132529768321485,0.116193942869518,0.310983165046111,0.756962552626885,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,2.21446636387394,0,0.4115740113314,0,0,0,2.95394953340702,0,0,0,0.878002283269004,0,0.100528972411631,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0.117408694235822,1.29929802984966,1.85194205030644,2.66355813128438,0,0.858486162094873,0.246217006087397,0,0,0,0,0.425325291727159,0,0,0,0,0,8.29312462163088,7.78247748451592,11.8667887420797,0,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,1.08524321078289,0,0.65147236858747,0,0,0,0,0.699810938274399,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0.36807447515742,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0,0.234282829985426,1.20378439891088,4.5481500811197,2.0694614258501,0,0.737476674166813,0.347534457872331,0.391602314925481,0.343143423810856,0.206768026122887,1.2942852049117,0.320182673410333,0.909382714338778,0,0.604780586659361,0.248107807818777,0,0.280660094433074,0.512556597022804,1.02341449813341,1.28683136914886,0,0,1.42049380250502,0.246381468041427,0,0.464841513839837,0.604297247958111,1.80455823272956,0.0920809889358963,0.114814448164607,0,1.18011973463482,0,0,0,0,0.211103257785751,0,0,0,41.6413582263781,0,1.00337954770971,0,0,0,0,0,0,0,1.30151357865721,2.7821073144885,0,0,0,0.650060246036521,1.6068392984416,0.193341436584244,0,0,0,0,0.290033387828457,0.0852266274161009,0.534192213880424,0.661139661443912,0,0.127612712494584,0.10115778085555,0.464845549297286,0.62962469366128,0,0.616067160352178,0,0,0.55597265731176,0.858749320451947,0,0.316379424718726,0,0,0.42793898803392,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0,0,0.272999822815972,1.1312434556297,0,0,3.3171948762061,1.75380354101505,0,0,0.202910376962704,0.92947049429925,0,0.143411352204052,0.0982490410131212,0,0,1.26664581178598,1.31717957183961,0,0,0.0962221127255121,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29985170869144,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0.333926115068718,0,0,0.796991953004279,0.828851746593443,0,0,0,0,0.0898683511473268,0.358042349351218,0.511572370226872,4.53759665929895,0,0,3.87733098438087,0.556608588971108,0,0.7812832832557,0.524759999977174,7.97499532978273,0,0,0.236387681767936,0,0,0.173624994933292,1.77148277162768,0.120596438625408,1.52581736317083,0.442317039724898,1.18219047581419,0.658156191461918,0.871507708151921,0.697118721393016,4.00141344219745,0.341826167541004,0.23056390438806,0.359030577639089,0,0.957003479195758,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,2.0345239835768,4.888241159469,0,0.123563938946503,0,0.404406797884062,0.802577647298789,0.937057782901357,0,0,0,2.76209081994573,1.20990716048664,0,0.884612114798832,1.80388103297391,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,4.54289337429278,0,0,0.511625219603299,0.0821154570532092,3.006659511141,0,0.90392296312213,0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| 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| ||
|short_description=p4@RHOB | |||
}} | }} | ||
Latest revision as of 16:51, 19 September 2015
| Short description: | p4@RHOB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_RHOB_5end |
| Coexpression cluster: | C830_Renal_Endothelial_adipose_Mast_ovary_testis_Lymphatic |
| Association with transcript: | -466bp_to_AF171089_5end |
| EntrezGene: | RHOB |
| HGNC: | 668 |
| UniProt: | Q7Z4F6 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 9.92e-13 | 15 |
| subcutaneous fat cell | 1.20e-07 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 2.41e-11 | 114 |
| duct of male reproductive system | 1.17e-09 | 4 |
| intermediate mesoderm | 1.30e-08 | 28 |
| male organism | 3.38e-08 | 22 |
| male reproductive system | 3.38e-08 | 22 |
| male genital duct | 5.96e-08 | 3 |
| internal male genitalia | 5.96e-08 | 3 |
| subcutaneous adipose tissue | 1.20e-07 | 3 |
| hypodermis | 2.00e-07 | 5 |
| male reproductive organ | 3.15e-07 | 11 |
| urogenital ridge | 5.83e-07 | 11 |