FFCP PHASE1:Hg19::chr1:200992739..200992763,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23046 | |EntrezGene=23046 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29442 | |HGNC=29442 | ||
|TSSclassifier=strong | |||
|UniProt=O75037,B2RP62 | |UniProt=O75037,B2RP62 | ||
|association_with_transcript=64bp_to_ENST00000332129,ENST00000422435,NM_001252100,NM_001252102,NM_001252103,NM_017596,uc001gvr.1,uc001gvs.1,uc009wzl.1,uc010ppn.1_5end | |association_with_transcript=64bp_to_ENST00000332129,ENST00000422435,NM_001252100,NM_001252102,NM_001252103,NM_017596,uc001gvr.1,uc001gvs.1,uc009wzl.1,uc010ppn.1_5end | ||
|cluster_id=chr1:200992739..200992763,- | |||
|coexpression_cluster_id=C1760 | |||
|description=CAGE_peak_3_at_KIF21B_5end | |description=CAGE_peak_3_at_KIF21B_5end | ||
|id=chr1:200992739..200992763,- | |id=chr1:200992739..200992763,- | ||
|ontology_enrichment_celltype=CL:0000037!2.86e-25!172;CL:0000566!2.86e-25!172;CL:0000988!8.25e-25!182;CL:0000542!6.98e-24!53;CL:0000051!6.98e-24!53;CL:0002032!1.07e-23!165;CL:0000837!1.07e-23!165;CL:0000838!1.20e-23!52;CL:0000738!3.56e-19!140;CL:0002087!1.03e-17!119;CL:0000084!3.58e-15!25;CL:0000827!3.58e-15!25;CL:0002031!4.51e-15!124;CL:0000791!2.93e-12!18;CL:0000789!2.93e-12!18;CL:0002420!2.93e-12!18;CL:0002419!2.93e-12!18;CL:0000790!2.93e-12!18;CL:0000945!3.62e-08!24;CL:0000826!3.62e-08!24;CL:0000625!4.45e-08!11 | |ontology_enrichment_celltype=CL:0000037!2.86e-25!172;CL:0000566!2.86e-25!172;CL:0000988!8.25e-25!182;CL:0000542!6.98e-24!53;CL:0000051!6.98e-24!53;CL:0002032!1.07e-23!165;CL:0000837!1.07e-23!165;CL:0000838!1.20e-23!52;CL:0000738!3.56e-19!140;CL:0002087!1.03e-17!119;CL:0000084!3.58e-15!25;CL:0000827!3.58e-15!25;CL:0002031!4.51e-15!124;CL:0000791!2.93e-12!18;CL:0000789!2.93e-12!18;CL:0002420!2.93e-12!18;CL:0002419!2.93e-12!18;CL:0000790!2.93e-12!18;CL:0000945!3.62e-08!24;CL:0000826!3.62e-08!24;CL:0000625!4.45e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.60e-20;25!CL:0000542;5.27e-19;53!CL:0000791;2.49e-16;18!CL:0000789;2.49e-16;18!CL:0002419;2.49e-16;18!CL:0000945;5.86e-11;24!CL:0000625;1.44e-10;11!CL:0000094;1.55e-07;8!CL:0000236;8.97e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.28e-33,53;CL:0000051,8.28e-33,53;CL:0000838,1.75e-32,52;CL:0000037,6.02e-24,168;CL:0000988,1.46e-23,177;CL:0002032,3.97e-22,161;CL:0000837,3.97e-22,161;CL:0000084,2.47e-20,25;CL:0000827,2.47e-20,25;CL:0000738,7.70e-18,136;CL:0002087,3.81e-17,115;CL:0000791,2.59e-16,18;CL:0000789,2.59e-16,18;CL:0002420,2.59e-16,18;CL:0002419,2.59e-16,18;CL:0000790,2.59e-16,18;CL:0002031,1.98e-12,120;CL:0000945,5.07e-11,24;CL:0000826,5.07e-11,24;CL:0000625,1.50e-10,11;CL:0000094,1.58e-07,8;CL:0000236,3.77e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;5.27e-19;53!CL:0000790;2.49e-16;18 | |||
|ontology_enrichment_disease=DOID:2531!1.77e-10!51;DOID:0060083!1.77e-10!51;DOID:1240!4.11e-08!39 | |ontology_enrichment_disease=DOID:2531!1.77e-10!51;DOID:0060083!1.77e-10!51;DOID:1240!4.11e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:2531;2.76e-07;51!DOID:0060083;2.76e-07;51!DOID:1240;3.54e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.49e-11,51;DOID:0060083,1.49e-11,51;DOID:1240,8.13e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-20!115;UBERON:0001049!7.34e-17!57;UBERON:0005068!7.34e-17!57;UBERON:0006241!7.34e-17!57;UBERON:0007135!7.34e-17!57;UBERON:0001017!6.15e-16!82;UBERON:0005743!1.07e-15!86;UBERON:0002780!2.10e-15!41;UBERON:0001890!2.10e-15!41;UBERON:0006240!2.10e-15!41;UBERON:0003080!1.52e-14!42;UBERON:0001893!1.64e-14!34;UBERON:0002020!1.88e-14!34;UBERON:0003528!1.88e-14!34;UBERON:0002619!4.26e-14!22;UBERON:0002791!5.07e-14!33;UBERON:0001869!5.41e-14!32;UBERON:0000955!9.70e-14!69;UBERON:0006238!9.70e-14!69;UBERON:0001950!5.57e-13!20;UBERON:0002616!7.61e-13!59;UBERON:0000073!5.43e-12!94;UBERON:0001016!5.43e-12!94;UBERON:0000956!7.76e-11!25;UBERON:0000203!7.76e-11!25;UBERON:0000178!9.79e-10!15;UBERON:0000179!9.79e-10!15;UBERON:0000463!9.79e-10!15;UBERON:0003075!2.01e-08!86;UBERON:0007284!2.01e-08!86;UBERON:0002346!9.44e-08!90;UBERON:0003056!1.69e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.18e-20!115;UBERON:0001049!7.34e-17!57;UBERON:0005068!7.34e-17!57;UBERON:0006241!7.34e-17!57;UBERON:0007135!7.34e-17!57;UBERON:0001017!6.15e-16!82;UBERON:0005743!1.07e-15!86;UBERON:0002780!2.10e-15!41;UBERON:0001890!2.10e-15!41;UBERON:0006240!2.10e-15!41;UBERON:0003080!1.52e-14!42;UBERON:0001893!1.64e-14!34;UBERON:0002020!1.88e-14!34;UBERON:0003528!1.88e-14!34;UBERON:0002619!4.26e-14!22;UBERON:0002791!5.07e-14!33;UBERON:0001869!5.41e-14!32;UBERON:0000955!9.70e-14!69;UBERON:0006238!9.70e-14!69;UBERON:0001950!5.57e-13!20;UBERON:0002616!7.61e-13!59;UBERON:0000073!5.43e-12!94;UBERON:0001016!5.43e-12!94;UBERON:0000956!7.76e-11!25;UBERON:0000203!7.76e-11!25;UBERON:0000178!9.79e-10!15;UBERON:0000179!9.79e-10!15;UBERON:0000463!9.79e-10!15;UBERON:0003075!2.01e-08!86;UBERON:0007284!2.01e-08!86;UBERON:0002346!9.44e-08!90;UBERON:0003056!1.69e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.91e-19;22!UBERON:0001869;7.79e-18;32!UBERON:0002791;1.75e-17;32!UBERON:0001893;1.98e-17;34!UBERON:0003528;2.03e-17;34!UBERON:0002020;2.03e-17;34!UBERON:0001950;3.14e-17;20!UBERON:0002780;5.93e-16;41!UBERON:0001890;5.93e-16;41!UBERON:0000956;1.74e-15;25!UBERON:0000203;1.74e-15;25!UBERON:0000178;6.62e-13;15!UBERON:0000179;6.62e-13;15!UBERON:0000463;6.62e-13;15!UBERON:0000073;3.04e-12;53!UBERON:0002616;3.04e-12;53!UBERON:0000955;1.13e-09;68!UBERON:0001017;2.74e-09;75!UBERON:0002390;1.11e-08;32!UBERON:0001016;3.40e-08;83!UBERON:0002420;4.00e-07;9!UBERON:0007245;4.00e-07;9!UBERON:0010009;4.00e-07;9!UBERON:0010011;4.00e-07;9!UBERON:0000454;4.00e-07;9!UBERON:0001871;5.99e-07;6 | |||
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|short_description=p3@KIF21B | |short_description=p3@KIF21B | ||
}} | }} |
Latest revision as of 16:51, 19 September 2015
Short description: | p3@KIF21B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIF21B_5end |
Coexpression cluster: | C1760_brain_occipital_temporal_duodenum_parietal_medulloblastoma_myeloma |
Association with transcript: | 64bp_to_ENST00000332129, ENST00000422435, NM_001252100, NM_001252102, NM_001252103, NM_017596, uc001gvr.1, uc001gvs.1, uc009wzl.1, uc010ppn.1_5end |
EntrezGene: | KIF21B |
HGNC: | 29442 |
UniProt: | O75037B2RP62 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.28e-33 | 53 |
common lymphoid progenitor | 8.28e-33 | 53 |
lymphoid lineage restricted progenitor cell | 1.75e-32 | 52 |
hematopoietic stem cell | 6.02e-24 | 168 |
hematopoietic cell | 1.46e-23 | 177 |
hematopoietic oligopotent progenitor cell | 3.97e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-22 | 161 |
T cell | 2.47e-20 | 25 |
pro-T cell | 2.47e-20 | 25 |
leukocyte | 7.70e-18 | 136 |
nongranular leukocyte | 3.81e-17 | 115 |
mature alpha-beta T cell | 2.59e-16 | 18 |
alpha-beta T cell | 2.59e-16 | 18 |
immature T cell | 2.59e-16 | 18 |
mature T cell | 2.59e-16 | 18 |
immature alpha-beta T cell | 2.59e-16 | 18 |
hematopoietic lineage restricted progenitor cell | 1.98e-12 | 120 |
lymphocyte of B lineage | 5.07e-11 | 24 |
pro-B cell | 5.07e-11 | 24 |
CD8-positive, alpha-beta T cell | 1.50e-10 | 11 |
granulocyte | 1.58e-07 | 8 |
B cell | 3.77e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.49e-11 | 51 |
immune system cancer | 1.49e-11 | 51 |
leukemia | 8.13e-09 | 39 |