FFCP PHASE1:Hg19::chr8:99306721..99306756,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25854 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H841,A2RTY8 | |||
|association_with_transcript=-100bp_to_ENST00000341166,NM_024759,uc003yil.1,uc003yim.1_5end | |||
|cluster_id=chr8:99306721..99306756,- | |||
|description=CAGE_peak_7_at_NIPAL2_5end | |||
|id=chr8:99306721..99306756,- | |||
|ontology_enrichment_celltype=CL:0002620!1.98e-07!23;CL:0000057!4.98e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002615;3.02e-07;3!CL:0000136;3.19e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.79e-10,15;CL:0002615,1.86e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-22!115;UBERON:0000475!1.33e-12!365;UBERON:0001049!1.59e-10!57;UBERON:0005068!1.59e-10!57;UBERON:0006241!1.59e-10!57;UBERON:0007135!1.59e-10!57;UBERON:0002619!3.66e-10!22;UBERON:0003080!3.77e-10!42;UBERON:0002780!8.67e-10!41;UBERON:0001890!8.67e-10!41;UBERON:0006240!8.67e-10!41;UBERON:0002616!9.68e-10!59;UBERON:0001950!2.57e-09!20;UBERON:0003102!2.99e-09!95;UBERON:0001893!1.60e-08!34;UBERON:0001869!2.63e-08!32;UBERON:0002020!3.22e-08!34;UBERON:0003528!3.22e-08!34;UBERON:0000956!5.75e-08!25;UBERON:0000203!5.75e-08!25;UBERON:0002791!6.16e-08!33;UBERON:0000955!7.14e-08!69;UBERON:0006238!7.14e-08!69;UBERON:0000153!1.68e-07!129;UBERON:0007811!1.68e-07!129;UBERON:0001017!1.92e-07!82;UBERON:0000033!1.98e-07!123;UBERON:0003075!2.04e-07!86;UBERON:0007284!2.04e-07!86;UBERON:0005743!2.61e-07!86;UBERON:0000468!3.33e-07!659;UBERON:0002199!3.89e-07!45;UBERON:0002416!3.89e-07!45;UBERON:0000310!6.43e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.61e-23;20!UBERON:0002619;1.43e-20;22!UBERON:0000956;1.15e-17;25!UBERON:0000203;1.15e-17;25!UBERON:0001869;6.86e-15;32!UBERON:0001893;2.99e-14;34!UBERON:0000200;2.25e-13;6!UBERON:0002791;7.57e-13;32!UBERON:0003528;4.31e-12;34!UBERON:0002020;4.31e-12;34!UBERON:0002780;2.36e-10;41!UBERON:0001890;2.36e-10;41!UBERON:0003688;1.41e-08;6!UBERON:0002358;1.41e-08;6!UBERON:0003684;1.41e-08;6!UBERON:0001178;1.41e-08;6!UBERON:0001872;6.00e-08;5!UBERON:0000073;6.24e-08;53!UBERON:0002616;6.24e-08;53!UBERON:0001870;8.52e-08;3!UBERON:0002021;3.24e-07;5!UBERON:0000310;6.83e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.13e-23,20;UBERON:0002619,3.37e-21,22;UBERON:0000956,3.28e-18,25;UBERON:0000203,3.28e-18,25;UBERON:0001869,3.80e-17,32;UBERON:0007023,8.65e-17,114;UBERON:0001893,7.20e-16,34;UBERON:0002780,1.45e-15,41;UBERON:0001890,1.45e-15,41;UBERON:0003080,1.45e-15,41;UBERON:0006240,1.45e-15,41;UBERON:0002791,4.93e-15,32;UBERON:0003528,6.69e-14,34;UBERON:0002020,6.69e-14,34;UBERON:0000200,1.18e-13,6;UBERON:0000073,2.57e-13,53;UBERON:0002616,2.57e-13,53;UBERON:0001049,2.69e-12,56;UBERON:0005068,2.69e-12,56;UBERON:0006241,2.69e-12,56;UBERON:0007135,2.69e-12,56;UBERON:0000955,3.48e-11,68;UBERON:0006238,3.48e-11,68;UBERON:0001017,1.90e-09,81;UBERON:0003056,8.71e-09,61;UBERON:0003688,1.00e-08,6;UBERON:0002358,1.00e-08,6;UBERON:0003684,1.00e-08,6;UBERON:0001178,1.00e-08,6;UBERON:0003075,3.38e-08,82;UBERON:0007284,3.38e-08,82;UBERON:0010371,5.02e-08,104;UBERON:0001872,6.42e-08,5;UBERON:0001016,6.63e-08,89;UBERON:0001870,7.75e-08,3;UBERON:0002346,1.50e-07,86;UBERON:0002021,1.94e-07,5;UBERON:0000310,3.69e-07,10 | |||
|phase1_expression=4.90531624030503,2.35510576280081,2.67813367782345,3.00219895059391,1.78784437770915,0.872338524100369,0,1.89515962028049,1.04474251279935,0,0,0,0,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0.0945348171640679,0,0.175669571386252,0.851363990735132,0.728590576585084,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0.258416759169329,0.71153252537342,0,0,0,0.24406205754817,0.367663080345869,0,0.357198913136319,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.936480230490962,0.570471821544449,0,0.352303495931295,0,0,0.61246251376468,0,0.206651562351531,2.37600571456411,0.494533858557114,0,0,0,0.500474079487857,0.277064115484183,0,0.612975591598039,1.50238058906597,0,0.358779271377724,0.640672166455702,1.48352330811693,3.90118424909723,1.13357782162283,2.31876486041066,0.37223371266318,0.843881661206331,0.487185025805993,2.77677151668526,2.48534726334208,4.0411514204703,1.42003837006646,0.604512589365842,0.169560592310488,0.773043412653187,0.545492241181669,0.286804595389004,0,0,0,0,0.504641701751257,0,0,0,1.38134921352481,1.39310378409594,0,0,0.168584690078102,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,1.71697232418975,0.246217006087397,0,0,0,0.335964256397719,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0.088048434013226,0,0,0.25248486685276,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,2.83698264046557,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0.871533458600294,0.299918973546171,0,0,0,0.479249710983165,0,0,0.723906533337896,0.205476322550383,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,0.623912584592421,0.178428988797162,0.630809660135739,0.937131319941706,0.902838299183157,2.27407504055985,0,0,0.184369168541703,1.12948698808508,0,0,0,0,0,0,0,0,1.98486246255021,1.38115775959256,1.40330047216537,1.15325234330131,1.53512174720011,0.321707842287215,0,0.925258162815933,0.532685175939381,0.98552587216571,0.519254429183621,0.813472649219715,0,0,0.276242966807689,0.229628896329213,0.910455840033585,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0.384380134730212,1.02090169995667,0.708104465988849,0,0,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0.762520775695299,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,1.09199929126389,0,0,0,0.66343897524122,1.31535265576129,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0.192444225451024,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0.278406173895242,0,0,0,0,0.37428108081644,0.586032717087576,0,0,0.568272293612826,0.95497793895076,0,0.921482106297696,1.9882952955326,0.844016498463076,0,0,0,0.19924798825107,1.38141957765574,0.503865495708552,0,0.123084805461069,3.11039587661807,0.0898683511473268,0,0,0.493217028184668,0,0,2.90799823828566,2.41197055220813,0,0.520855522170466,0.699679999969566,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0.482385754501632,0,1.21637185924347,0.295547618953547,3.07139556015562,0,0.697118721393016,0.846452843541768,0.113942055847001,0,0,0.108647371922008,0,0.183195186803725,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0.216388639742091,2.98578579323551,0.796118080530053,2.4441205797345,0,0,0,0.269604531922708,0,0.468528891450678,0,0.19566461893209,0,1.57833761139756,0,0,0.821425535170343,0,0.311064574191741,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,1.92199335066233,0.171986032471617,0,0,0,1.45483524732629,0,1.12990370390266,0,0.19871461170299,2.78567502205866,0,0.0801588202515337,2.13452994739353,0,0.144090417154106,0.229073192331831,0.514784993585894,0,0,0.707082103850386,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,1.14580212005842,0,0.199679000498991,0.429226048136571,0.223171457441873,0.470284307407084,0.72059976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| |||
|short_description=p7@NIPAL2 | |||
}} |
Latest revision as of 16:50, 19 September 2015
Short description: | p7@NIPAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NIPAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000341166, NM_024759, uc003yil.1, uc003yim.1_5end |
EntrezGene: | NIPAL2 |
HGNC: | 25854 |
UniProt: | Q9H841A2RTY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.79e-10 | 15 |
adipocyte of omentum tissue | 1.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.13e-23 | 20 |
regional part of cerebral cortex | 3.37e-21 | 22 |
cerebral cortex | 3.28e-18 | 25 |
pallium | 3.28e-18 | 25 |
cerebral hemisphere | 3.80e-17 | 32 |
adult organism | 8.65e-17 | 114 |
telencephalon | 7.20e-16 | 34 |
regional part of forebrain | 1.45e-15 | 41 |
forebrain | 1.45e-15 | 41 |
anterior neural tube | 1.45e-15 | 41 |
future forebrain | 1.45e-15 | 41 |
regional part of telencephalon | 4.93e-15 | 32 |
brain grey matter | 6.69e-14 | 34 |
gray matter | 6.69e-14 | 34 |
gyrus | 1.18e-13 | 6 |
regional part of nervous system | 2.57e-13 | 53 |
regional part of brain | 2.57e-13 | 53 |
neural tube | 2.69e-12 | 56 |
neural rod | 2.69e-12 | 56 |
future spinal cord | 2.69e-12 | 56 |
neural keel | 2.69e-12 | 56 |
brain | 3.48e-11 | 68 |
future brain | 3.48e-11 | 68 |
central nervous system | 1.90e-09 | 81 |
pre-chordal neural plate | 8.71e-09 | 61 |
omentum | 1.00e-08 | 6 |
peritoneum | 1.00e-08 | 6 |
abdominal cavity | 1.00e-08 | 6 |
visceral peritoneum | 1.00e-08 | 6 |
neural plate | 3.38e-08 | 82 |
presumptive neural plate | 3.38e-08 | 82 |
ecto-epithelium | 5.02e-08 | 104 |
parietal lobe | 6.42e-08 | 5 |
nervous system | 6.63e-08 | 89 |
frontal cortex | 7.75e-08 | 3 |
neurectoderm | 1.50e-07 | 86 |
occipital lobe | 1.94e-07 | 5 |
breast | 3.69e-07 | 10 |