FFCP PHASE1:Hg19::chr19:52408257..52408278,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65251 | |EntrezGene=65251 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25741 | |HGNC=25741 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_uc002pxy.2_5end | |association_with_transcript=-10bp_to_uc002pxy.2_5end | ||
|cluster_id=chr19:52408257..52408278,- | |||
|coexpression_cluster_id=C3819 | |||
|description=CAGE_peak_1_at_ZNF649_5end | |description=CAGE_peak_1_at_ZNF649_5end | ||
|id=chr19:52408257..52408278,- | |id=chr19:52408257..52408278,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.07e-29!115;UBERON:0001017!8.71e-22!82;UBERON:0001049!8.96e-22!57;UBERON:0005068!8.96e-22!57;UBERON:0006241!8.96e-22!57;UBERON:0007135!8.96e-22!57;UBERON:0005743!1.79e-21!86;UBERON:0000073!2.21e-20!94;UBERON:0001016!2.21e-20!94;UBERON:0002780!9.64e-19!41;UBERON:0001890!9.64e-19!41;UBERON:0006240!9.64e-19!41;UBERON:0002616!4.16e-18!59;UBERON:0003080!4.69e-18!42;UBERON:0000955!5.12e-16!69;UBERON:0006238!5.12e-16!69;UBERON:0002020!1.89e-15!34;UBERON:0003528!1.89e-15!34;UBERON:0001893!2.19e-15!34;UBERON:0002791!5.05e-15!33;UBERON:0002346!1.64e-14!90;UBERON:0003075!2.86e-14!86;UBERON:0007284!2.86e-14!86;UBERON:0001869!3.43e-14!32;UBERON:0003056!1.69e-11!61;UBERON:0000956!4.86e-11!25;UBERON:0000203!4.86e-11!25;UBERON:0002619!1.29e-10!22;UBERON:0001950!1.49e-09!20;UBERON:0000924!2.36e-09!173;UBERON:0006601!2.36e-09!173;UBERON:0004121!4.79e-09!169;UBERON:0000153!4.03e-08!129;UBERON:0007811!4.03e-08!129;UBERON:0000033!2.12e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.01e-13;41!UBERON:0001890;1.01e-13;41!UBERON:0003528;1.27e-13;34!UBERON:0002020;1.27e-13;34!UBERON:0001893;1.87e-13;34!UBERON:0002791;3.31e-13;32!UBERON:0001869;5.26e-13;32!UBERON:0000073;6.69e-13;53!UBERON:0002616;6.69e-13;53!UBERON:0000956;4.01e-11;25!UBERON:0000203;4.01e-11;25!UBERON:0002619;1.23e-10;22!UBERON:0001950;1.49e-09;20!UBERON:0007023;7.05e-09;114!UBERON:0001017;1.02e-08;75!UBERON:0000955;9.66e-08;68!UBERON:0001016;1.65e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.38e-29,114;UBERON:0001049,2.04e-22,56;UBERON:0005068,2.04e-22,56;UBERON:0006241,2.04e-22,56;UBERON:0007135,2.04e-22,56;UBERON:0001017,2.96e-22,81;UBERON:0000073,5.32e-21,53;UBERON:0002616,5.32e-21,53;UBERON:0001016,5.53e-21,89;UBERON:0002780,9.44e-19,41;UBERON:0001890,9.44e-19,41;UBERON:0003080,9.44e-19,41;UBERON:0006240,9.44e-19,41;UBERON:0000955,1.97e-16,68;UBERON:0006238,1.97e-16,68;UBERON:0002346,1.11e-15,86;UBERON:0003075,1.82e-15,82;UBERON:0007284,1.82e-15,82;UBERON:0003528,1.85e-15,34;UBERON:0002020,1.85e-15,34;UBERON:0001893,2.16e-15,34;UBERON:0002791,2.04e-14,32;UBERON:0001869,3.38e-14,32;UBERON:0010371,8.78e-13,104;UBERON:0003056,2.14e-12,61;UBERON:0000956,4.81e-11,25;UBERON:0000203,4.81e-11,25;UBERON:0002619,1.28e-10,22;UBERON:0004121,1.19e-09,171;UBERON:0000924,1.19e-09,171;UBERON:0006601,1.19e-09,171;UBERON:0001950,1.48e-09,20;UBERON:0010314,7.10e-07,132 | |||
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| ||
|short_description=p1@ZNF649 | |short_description=p1@ZNF649 | ||
}} | }} |
Latest revision as of 16:48, 19 September 2015
Short description: | p1@ZNF649 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF649_5end |
Coexpression cluster: | C3819_testicular_Mast_hepatoblastoma_endometrial_cerebellum_cord_H9 |
Association with transcript: | -10bp_to_uc002pxy.2_5end |
EntrezGene: | ZNF649 |
HGNC: | 25741 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.38e-29 | 114 |
neural tube | 2.04e-22 | 56 |
neural rod | 2.04e-22 | 56 |
future spinal cord | 2.04e-22 | 56 |
neural keel | 2.04e-22 | 56 |
central nervous system | 2.96e-22 | 81 |
regional part of nervous system | 5.32e-21 | 53 |
regional part of brain | 5.32e-21 | 53 |
nervous system | 5.53e-21 | 89 |
regional part of forebrain | 9.44e-19 | 41 |
forebrain | 9.44e-19 | 41 |
anterior neural tube | 9.44e-19 | 41 |
future forebrain | 9.44e-19 | 41 |
brain | 1.97e-16 | 68 |
future brain | 1.97e-16 | 68 |
neurectoderm | 1.11e-15 | 86 |
neural plate | 1.82e-15 | 82 |
presumptive neural plate | 1.82e-15 | 82 |
brain grey matter | 1.85e-15 | 34 |
gray matter | 1.85e-15 | 34 |
telencephalon | 2.16e-15 | 34 |
regional part of telencephalon | 2.04e-14 | 32 |
cerebral hemisphere | 3.38e-14 | 32 |
ecto-epithelium | 8.78e-13 | 104 |
pre-chordal neural plate | 2.14e-12 | 61 |
cerebral cortex | 4.81e-11 | 25 |
pallium | 4.81e-11 | 25 |
regional part of cerebral cortex | 1.28e-10 | 22 |
ectoderm-derived structure | 1.19e-09 | 171 |
ectoderm | 1.19e-09 | 171 |
presumptive ectoderm | 1.19e-09 | 171 |
neocortex | 1.48e-09 | 20 |
structure with developmental contribution from neural crest | 7.10e-07 | 132 |