FFCP PHASE1:Hg19::chr17:34431082..34431115,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr17:34431082..34431115,+ to FFCP PHASE1:Hg19::chr17:34431082..34431115,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6351 | |EntrezGene=6351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10630 | |HGNC=10630 | ||
|TSSclassifier=strong | |||
|UniProt=P13236,Q7M4M2 | |UniProt=P13236,Q7M4M2 | ||
|association_with_transcript=-104bp_to_ENST00000250151,ENST00000394495,NM_002984,uc002hkw.1,uc002hkx.1_5end | |||
|cluster_id=chr17:34431082..34431115,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_4_at_CCL4_5end | |||
|id=chr17:34431082..34431115,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.15e-36!140;CL:0002087!2.84e-34!119;CL:0002031!1.07e-27!124;CL:0000037!6.95e-26!172;CL:0000566!6.95e-26!172;CL:0000542!2.54e-25!53;CL:0000051!2.54e-25!53;CL:0002032!3.01e-24!165;CL:0000837!3.01e-24!165;CL:0000838!4.54e-24!52;CL:0000988!2.02e-23!182;CL:0000625!5.50e-21!11;CL:0000791!1.89e-18!18;CL:0000789!1.89e-18!18;CL:0002420!1.89e-18!18;CL:0002419!1.89e-18!18;CL:0000790!1.89e-18!18;CL:0000084!9.08e-14!25;CL:0000827!9.08e-14!25;CL:0000766!1.17e-12!76;CL:0002057!3.43e-12!42;CL:0000860!5.42e-11!45;CL:0002194!1.13e-08!63;CL:0000576!1.13e-08!63;CL:0000040!1.13e-08!63;CL:0000559!1.13e-08!63;CL:0002009!3.16e-08!65;CL:0000094!3.74e-08!8;CL:0000839!5.71e-08!70;CL:0000945!5.84e-08!24;CL:0000826!5.84e-08!24;CL:0000557!8.98e-08!71;CL:0000623!5.41e-07!3;CL:0000825!5.41e-07!3;CL:0000767!9.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.65e-53;11!CL:0000791;8.15e-38;18!CL:0000789;8.15e-38;18!CL:0002419;8.15e-38;18!CL:0000084;1.67e-26;25!CL:0000542;4.51e-20;53!CL:0000623;5.98e-16;3!CL:0000767;4.15e-15;3!CL:0002087;3.98e-11;104!CL:0000094;6.98e-10;8!CL:0000081;3.33e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.31e-53,11;CL:0000542,5.81e-40,53;CL:0000051,5.81e-40,53;CL:0000791,7.57e-38,18;CL:0000789,7.57e-38,18;CL:0002420,7.57e-38,18;CL:0002419,7.57e-38,18;CL:0000790,7.57e-38,18;CL:0000838,3.63e-37,52;CL:0000738,1.53e-27,136;CL:0000084,1.58e-26,25;CL:0000827,1.58e-26,25;CL:0002087,1.44e-24,115;CL:0000037,4.87e-21,168;CL:0002032,1.41e-20,161;CL:0000837,1.41e-20,161;CL:0000988,1.24e-19,177;CL:0002031,1.34e-19,120;CL:0000623,5.43e-16,3;CL:0000825,5.43e-16,3;CL:0000767,2.63e-15,3;CL:0000094,5.16e-10,8;CL:0000081,2.69e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.15e-38;18!CL:0000051;4.51e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-16!102;UBERON:0003061!1.44e-16!102;UBERON:0002193!4.77e-15!112;UBERON:0000178!2.99e-13!15;UBERON:0000179!2.99e-13!15;UBERON:0000463!2.99e-13!15;UBERON:0007023!1.35e-11!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.31e-19;15!UBERON:0000179;4.31e-19;15!UBERON:0000463;4.31e-19;15!UBERON:0002390;1.29e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.12e-19,15;UBERON:0000179,4.12e-19,15;UBERON:0000463,4.12e-19,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.64201178899891,2.04648031415566,1.96682138424452,8.06041736004147,1.54816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0,0,0,0.929716147622738,0,0.929119112685311,0.28769239232215,0.256160706529101,0.47296445977717,1.03423704220986,0.645484683583826,1.35426486594342,0.188242339542605,0,0,0.918251677112708,0,1.91801137739712,0,0,0.426224750532694,0.290209238628584,2.26954089876456,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0,0,0,0.276350017785848,0,0,0,0,1.47302145506836,3.83220493601921,1.37450978193052,0.506039384039006,4.14135038621326,4.55758417699493,13.3063286222772,2.40920190524436,3.83959833463255,7.49584359314075,5.91943130110042,8.21127996921047,3.42731463482045,2.67440195783507,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,3.94061520403854,4.74380664690938,5.39040752374943,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,2.29391162142713,0,1.66762242820452,2.87953591160336,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,1.30062222588003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.46169610922139,0,0,0,0,0.197286811273867,7.18449277040819,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,1.31577485171795,0.644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0.0636471582781649,0,0.217716747896961,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,1.60284246151616 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.64201178899891,2.04648031415566,1.96682138424452,8.06041736004147,1.54816123316076,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0.647787332037959,0,0,0,0,0.929716147622738,0,0.929119112685311,0.28769239232215,0.256160706529101,0.47296445977717,1.03423704220986,0.645484683583826,1.35426486594342,0.188242339542605,0,0,0.918251677112708,0,1.91801137739712,0,0,0.426224750532694,0.290209238628584,2.26954089876456,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0,0,0,0.276350017785848,0,0,0,0,1.47302145506836,3.83220493601921,1.37450978193052,0.506039384039006,4.14135038621326,4.55758417699493,13.3063286222772,2.40920190524436,3.83959833463255,7.49584359314075,5.91943130110042,8.21127996921047,3.42731463482045,2.67440195783507,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,3.94061520403854,4.74380664690938,5.39040752374943,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.52234282769651,2.29391162142713,0,1.66762242820452,2.87953591160336,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0,1.30062222588003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.46169610922139,0,0,0,0,0.197286811273867,7.18449277040819,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,1.31577485171795,0.644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0.0636471582781649,0,0.217716747896961,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,1.60284246151616 | ||
|short_description=p4@CCL4 | |||
}} | }} |
Latest revision as of 16:44, 19 September 2015
Short description: | p4@CCL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCL4_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -104bp_to_ENST00000250151, ENST00000394495, NM_002984, uc002hkw.1, uc002hkx.1_5end |
EntrezGene: | CCL4 |
HGNC: | 10630 |
UniProt: | P13236Q7M4M2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.31e-53 | 11 |
lymphocyte | 5.81e-40 | 53 |
common lymphoid progenitor | 5.81e-40 | 53 |
mature alpha-beta T cell | 7.57e-38 | 18 |
alpha-beta T cell | 7.57e-38 | 18 |
immature T cell | 7.57e-38 | 18 |
mature T cell | 7.57e-38 | 18 |
immature alpha-beta T cell | 7.57e-38 | 18 |
lymphoid lineage restricted progenitor cell | 3.63e-37 | 52 |
leukocyte | 1.53e-27 | 136 |
T cell | 1.58e-26 | 25 |
pro-T cell | 1.58e-26 | 25 |
nongranular leukocyte | 1.44e-24 | 115 |
hematopoietic stem cell | 4.87e-21 | 168 |
hematopoietic oligopotent progenitor cell | 1.41e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-20 | 161 |
hematopoietic cell | 1.24e-19 | 177 |
hematopoietic lineage restricted progenitor cell | 1.34e-19 | 120 |
natural killer cell | 5.43e-16 | 3 |
pro-NK cell | 5.43e-16 | 3 |
basophil | 2.63e-15 | 3 |
granulocyte | 5.16e-10 | 8 |
blood cell | 2.69e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 4.12e-19 | 15 |
haemolymphatic fluid | 4.12e-19 | 15 |
organism substance | 4.12e-19 | 15 |