FFCP PHASE1:Hg19::chr1:200860122..200860160,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55765 | |EntrezGene=55765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25599 | |HGNC=25599 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK29 | |UniProt=E9PK29 | ||
|association_with_transcript=-15bp_to_ENST00000532631_5end | |association_with_transcript=-15bp_to_ENST00000532631_5end | ||
|cluster_id=chr1:200860122..200860160,+ | |||
|description=CAGE_peak_4_at_C1orf106_5end | |description=CAGE_peak_4_at_C1orf106_5end | ||
|id=chr1:200860122..200860160,+ | |id=chr1:200860122..200860160,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.18e-09!254 | |ontology_enrichment_celltype=CL:0000066!1.18e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.28e-19;5!CL:1000497;2.16e-09;17!CL:0002518;2.16e-09;17!CL:1000507;9.86e-09;10!CL:1000494;9.86e-09;10!CL:0000039;4.83e-08;7!CL:0000586;4.83e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.53e-19,5;CL:1000497,3.01e-09,17;CL:0002518,3.01e-09,17;CL:1000507,1.52e-08,10;CL:1000494,1.52e-08,10;CL:0000039,9.43e-08,7;CL:0000586,9.43e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0003918;9.86e-09;10!UBERON:0007687;9.86e-09;10 | |||
|ontology_enrichment_disease=DOID:305!9.50e-18!106;DOID:0050687!3.76e-16!143;DOID:162!3.42e-13!235;DOID:14566!2.63e-12!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.92e-11!27;UBERON:0003918!1.92e-11!27;UBERON:0005095!1.92e-11!27;UBERON:0007687!1.92e-11!27;UBERON:0000489!2.05e-11!32;UBERON:0005172!1.83e-09!55;UBERON:0005173!1.83e-09!55;UBERON:0005177!3.62e-09!107;UBERON:0006554!3.71e-09!44;UBERON:0002417!5.94e-09!61;UBERON:0000916!5.94e-09!61;UBERON:0001008!9.33e-09!45;UBERON:0001007!7.14e-08!155;UBERON:0001555!7.14e-08!155;UBERON:0007026!7.14e-08!155;UBERON:0004921!1.97e-07!129;UBERON:0004185!1.97e-07!129;UBERON:0004119!2.08e-07!169;UBERON:0000925!2.08e-07!169;UBERON:0006595!2.08e-07!169;UBERON:0000160!6.01e-07!27 | |ontology_enrichment_uberon=UBERON:0002113!1.92e-11!27;UBERON:0003918!1.92e-11!27;UBERON:0005095!1.92e-11!27;UBERON:0007687!1.92e-11!27;UBERON:0000489!2.05e-11!32;UBERON:0005172!1.83e-09!55;UBERON:0005173!1.83e-09!55;UBERON:0005177!3.62e-09!107;UBERON:0006554!3.71e-09!44;UBERON:0002417!5.94e-09!61;UBERON:0000916!5.94e-09!61;UBERON:0001008!9.33e-09!45;UBERON:0001007!7.14e-08!155;UBERON:0001555!7.14e-08!155;UBERON:0007026!7.14e-08!155;UBERON:0004921!1.97e-07!129;UBERON:0004185!1.97e-07!129;UBERON:0004119!2.08e-07!169;UBERON:0000925!2.08e-07!169;UBERON:0006595!2.08e-07!169;UBERON:0000160!6.01e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;6.64e-13;24!UBERON:0011143;6.64e-13;24!UBERON:0000489;2.44e-10;29!UBERON:0006554;6.26e-10;30!UBERON:0001008;6.26e-10;30!UBERON:0004211;9.86e-09;10!UBERON:0009773;9.86e-09;10!UBERON:0001231;9.86e-09;10!UBERON:0004810;9.86e-09;10!UBERON:0005172;2.20e-07;52!UBERON:0005173;2.20e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.25e-11,26;UBERON:0003918,1.25e-11,26;UBERON:0011143,1.25e-11,26;UBERON:0005095,1.25e-11,26;UBERON:0007687,1.25e-11,26;UBERON:0005172,1.26e-09,54;UBERON:0005173,1.26e-09,54;UBERON:0000489,1.92e-09,31;UBERON:0004810,1.52e-08,10;UBERON:0002417,2.32e-08,60;UBERON:0000916,2.32e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0,0.626909442956176,0.286235987131057,1.23186982565596,0.627713197974014,2.13957536094264,1.55991119954897,1.25937250101887,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.263504357079378,0.130979075497713,0,0.741568885568859,0,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.737005903870608,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.860413786167011,5.12289565744301,4.24095258628753,4.88014560051977,2.17688215532278,1.51392510525377,2.55484151353081,0,0,0,0,0,0.591534000199219,0.337169380156203,0.482022059766964,0.220587945464788,0,0.474541238222193,0.404493924480493,0.392442930250692,1.15424147083917,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0.927443239800615,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.320182673410333,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0.321707842287215,0,0,0,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0.368323955743585,0,0,0,2.25599806453706,0.847168708148562,2.35304930753057,1.46139224653261,1.05551628892876,0,0,0.215915916102139,0,0.812839312631559,1.00337954770971,0.764628819135115,0,0.895499018888713,0,0,0.769350375349168,0,0,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6023610669121,2.88743956579008,0.490080431962063,0,0,0,0,0,0.191505370132367,0,0,0,1.36940807419915,0.313359791546046,0,0,0.642352300414798,0.403599414382095,2.98092366383228,0,6.45205605047762,5.5919026973104,5.50602167649298,1.17232857241224,0,0,0.270455678475983,0,0,0.748562161632879,0,0.606802608747567,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0,4.64475897881586,0.398495976502139,0.276283915531148,0,0.715880777515084,0.861593638227486,0,0.269605053441981,0.179021174675609,2.04628948090749,0,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0.69169171316418,1.34636466614658,0.217294743844016,0,0,0,0,2.98262487150547,0.166211681900156,0,0,0,0,0,0.843992258112108,0.326465616318295,0.282706142867882,0.649165919226273,0,0.176915129006678,0.611030144933625,0,0.741383633679017,0.522109747527277,0.269604531922708,0,0.468528891450678,0,0.391329237864179,0,0,0,0,0,0.450970258243478,1.03688191397247,0,0.330991955875499,0.313932918407225,1.19472429772959,0,0,0.867798691675654,0.293977192243133,0.783532859223623,0.17472666824203,0,0,0,0.0821154570532092,0.193978032976839,0.176512253383001,0,0,0,0.0633107959558787,0.586654148204409,0.480952921509202,0.213452994739353,0,1.15272333723285,1.60351234632282,0,0.14405479798815,0.372757606696298,0,0.271808412147228,0.104602846312333,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0,0,3.49487848582361,1.3393140992228,0.329663433524666,0.741438982396034,0.590564889088493,5.75778658047334,0,0.408610218334727,3.21506296930038,5.08895915409765,3.32352270423348,0,0,0.121499113316049,0,0.394028536495991,0.786818822024972,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.79318464064088,0,0,0,0,1.88195521672762,0.704815022316672,0,0,0,0,1.58089305518355,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.110929051536852,0.18628920882415,0.138348634936231,0.37494122388632,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0,0.314531883711793,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,1.1796972334774,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0.887136517302272,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0.255524855279191,0,0,0,0,0,2.88084968889448,0,0.0679697329768317,0.0657727735628491,0.354581522651905,0.889851215136553,0.156986185701028,0,1.40136081656895,0.913158720509496,1.29556554731173,2.8665101273223,0.142953088353313,0,0,0.869291361512897,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.475680363110274,0.11294608203896,0.109940516745429,0.150962843566674,0.308696632431779,0.437119121007915,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0.436350690340377,1.0580536810308,0,0,0,1.51399709802095,1.85751472338282,0.253397002022874,0.713921808193872,1.06886962106224,1.10273879441814,1.0028301571695,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0.244209805832924,0.320182037633146,0,1.61685363791856,0,0,0,0,0.201273793591026,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0,0.626909442956176,0.286235987131057,1.23186982565596,0.627713197974014,2.13957536094264,1.55991119954897,1.25937250101887,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.263504357079378,0.130979075497713,0,0.741568885568859,0,0.348259474598534,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.737005903870608,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.860413786167011,5.12289565744301,4.24095258628753,4.88014560051977,2.17688215532278,1.51392510525377,2.55484151353081,0,0,0,0,0,0.591534000199219,0.337169380156203,0.482022059766964,0.220587945464788,0,0.474541238222193,0.404493924480493,0.392442930250692,1.15424147083917,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0.927443239800615,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.320182673410333,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0.321707842287215,0,0,0,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0.368323955743585,0,0,0,2.25599806453706,0.847168708148562,2.35304930753057,1.46139224653261,1.05551628892876,0,0,0.215915916102139,0,0.812839312631559,1.00337954770971,0.764628819135115,0,0.895499018888713,0,0,0.769350375349168,0,0,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.893288987462089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6023610669121,2.88743956579008,0.490080431962063,0,0,0,0,0,0.191505370132367,0,0,0,1.36940807419915,0.313359791546046,0,0,0.642352300414798,0.403599414382095,2.98092366383228,0,6.45205605047762,5.5919026973104,5.50602167649298,1.17232857241224,0,0,0.270455678475983,0,0,0.748562161632879,0,0.606802608747567,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0,4.64475897881586,0.398495976502139,0.276283915531148,0,0.715880777515084,0.861593638227486,0,0.269605053441981,0.179021174675609,2.04628948090749,0,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0.69169171316418,1.34636466614658,0.217294743844016,0,0,0,0,2.98262487150547,0.166211681900156,0,0,0,0,0,0.843992258112108,0.326465616318295,0.282706142867882,0.649165919226273,0,0.176915129006678,0.611030144933625,0,0.741383633679017,0.522109747527277,0.269604531922708,0,0.468528891450678,0,0.391329237864179,0,0,0,0,0,0.450970258243478,1.03688191397247,0,0.330991955875499,0.313932918407225,1.19472429772959,0,0,0.867798691675654,0.293977192243133,0.783532859223623,0.17472666824203,0,0,0,0.0821154570532092,0.193978032976839,0.176512253383001,0,0,0,0.0633107959558787,0.586654148204409,0.480952921509202,0.213452994739353,0,1.15272333723285,1.60351234632282,0,0.14405479798815,0.372757606696298,0,0.271808412147228,0.104602846312333,0,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0,0,3.49487848582361,1.3393140992228,0.329663433524666,0.741438982396034,0.590564889088493,5.75778658047334,0,0.408610218334727,3.21506296930038,5.08895915409765,3.32352270423348,0,0,0.121499113316049,0,0.394028536495991,0.786818822024972,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.79318464064088,0,0,0,0,1.88195521672762,0.704815022316672,0,0,0,0,1.58089305518355,0,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.110929051536852,0.18628920882415,0.138348634936231,0.37494122388632,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0.127894371303652,0,0.314531883711793,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,1.1796972334774,0,0,0,0,0,0,0.20170506870352,0,0.261906694481422,0,0.887136517302272,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0.255524855279191,0,0,0,0,0,2.88084968889448,0,0.0679697329768317,0.0657727735628491,0.354581522651905,0.889851215136553,0.156986185701028,0,1.40136081656895,0.913158720509496,1.29556554731173,2.8665101273223,0.142953088353313,0,0,0.869291361512897,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.475680363110274,0.11294608203896,0.109940516745429,0.150962843566674,0.308696632431779,0.437119121007915,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0.436350690340377,1.0580536810308,0,0,0,1.51399709802095,1.85751472338282,0.253397002022874,0.713921808193872,1.06886962106224,1.10273879441814,1.0028301571695,0,0.267964130156178,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0.244209805832924,0.320182037633146,0,1.61685363791856,0,0,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p4@C1orf106 | |short_description=p4@C1orf106 | ||
}} | }} |
Latest revision as of 16:40, 19 September 2015
Short description: | p4@C1orf106 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C1orf106_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000532631_5end |
EntrezGene: | C1orf106 |
HGNC: | 25599 |
UniProt: | E9PK29 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.53e-19 | 5 |
kidney cell | 3.01e-09 | 17 |
kidney epithelial cell | 3.01e-09 | 17 |
kidney tubule cell | 1.52e-08 | 10 |
nephron tubule epithelial cell | 1.52e-08 | 10 |
germ line cell | 9.43e-08 | 7 |
germ cell | 9.43e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.25e-11 | 26 |
kidney mesenchyme | 1.25e-11 | 26 |
upper urinary tract | 1.25e-11 | 26 |
kidney rudiment | 1.25e-11 | 26 |
kidney field | 1.25e-11 | 26 |
abdomen element | 1.26e-09 | 54 |
abdominal segment element | 1.26e-09 | 54 |
cavitated compound organ | 1.92e-09 | 31 |
nephron tubule epithelium | 1.52e-08 | 10 |
abdominal segment of trunk | 2.32e-08 | 60 |
abdomen | 2.32e-08 | 60 |