FFCP PHASE1:Hg19::chr6:107811359..107811370,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=55084 | |EntrezGene=55084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29256 | |HGNC=29256 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=A7XYQ1,Q24K27 | |UniProt=A7XYQ1,Q24K27 | ||
|association_with_transcript=42bp_to_NM_018013,uc003prw.1,uc003prx.2_5end | |association_with_transcript=42bp_to_NM_018013,uc003prw.1,uc003prx.2_5end | ||
|cluster_id=chr6:107811359..107811370,+ | |||
|description=CAGE_peak_6_at_SOBP_5end | |description=CAGE_peak_6_at_SOBP_5end | ||
|id=chr6:107811359..107811370,+ | |id=chr6:107811359..107811370,+ |
Latest revision as of 16:34, 19 September 2015
Short description: | p6@SOBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SOBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_NM_018013, uc003prw.1, uc003prx.2_5end |
EntrezGene: | SOBP |
HGNC: | 29256 |
UniProt: | A7XYQ1Q24K27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@SOBP |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.71e-62 | 56 |
neural rod | 1.71e-62 | 56 |
future spinal cord | 1.71e-62 | 56 |
neural keel | 1.71e-62 | 56 |
regional part of nervous system | 5.09e-62 | 53 |
regional part of brain | 5.09e-62 | 53 |
brain | 9.04e-53 | 68 |
future brain | 9.04e-53 | 68 |
regional part of forebrain | 4.20e-49 | 41 |
forebrain | 4.20e-49 | 41 |
Showing 1 to 10 of 79 entries