FFCP PHASE1:Hg19::chr8:99057769..99057776,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:99057769..99057776,- to FFCP PHASE1:Hg19::chr8:99057769..99057776,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6156 | |EntrezGene=6156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10333 | |HGNC=10333 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJH3 | |UniProt=E5RJH3 | ||
|association_with_transcript=0bp_to_ENST00000396070,ENST00000518164,ENST00000518850,ENST00000520998,ENST00000521112,ENST00000523172,uc003yif.2,uc010mbk.1_5end | |||
|cluster_id=chr8:99057769..99057776,- | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_RPL30_5end | |||
|id=chr8:99057769..99057776,- | |||
|ontology_enrichment_celltype=CL:0002087!2.92e-20!119;CL:0000542!6.18e-18!53;CL:0000051!6.18e-18!53;CL:0000838!1.29e-17!52;CL:0000988!5.38e-16!182;CL:0002031!5.53e-16!124;CL:0000037!6.55e-16!172;CL:0000566!6.55e-16!172;CL:0000738!1.02e-15!140;CL:0002032!1.45e-13!165;CL:0000837!1.45e-13!165;CL:0000791!1.59e-12!18;CL:0000789!1.59e-12!18;CL:0002420!1.59e-12!18;CL:0002419!1.59e-12!18;CL:0000790!1.59e-12!18;CL:0000084!4.66e-11!25;CL:0000827!4.66e-11!25;CL:0002057!2.22e-10!42;CL:0000860!3.85e-09!45;CL:0000236!4.41e-09!14;CL:0000625!2.39e-08!11;CL:0000003!4.91e-07!722;CL:0000945!6.68e-07!24;CL:0000826!6.68e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-12;18!CL:0000789;1.59e-12;18!CL:0002419;1.59e-12;18!CL:0000542;2.70e-11;53!CL:0000084;4.71e-11;25!CL:0002087;9.61e-09;104!CL:0000236;1.36e-08;13!CL:0000625;2.39e-08;11!CL:0000860;5.76e-07;33!CL:0002057;5.76e-07;33!CL:0000945;6.67e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.71e-22,115;CL:0000542,6.18e-18,53;CL:0000051,6.18e-18,53;CL:0000838,1.29e-17,52;CL:0002031,2.82e-17,120;CL:0000037,6.06e-17,168;CL:0000738,6.81e-17,136;CL:0000988,8.14e-17,177;CL:0002032,1.62e-14,161;CL:0000837,1.62e-14,161;CL:0000791,1.59e-12,18;CL:0000789,1.59e-12,18;CL:0002420,1.59e-12,18;CL:0002419,1.59e-12,18;CL:0000790,1.59e-12,18;CL:0000084,4.66e-11,25;CL:0000827,4.66e-11,25;CL:0000860,2.22e-10,42;CL:0002057,2.22e-10,42;CL:0000236,4.41e-09,14;CL:0000625,2.39e-08,11;CL:0000945,6.68e-07,24;CL:0000826,6.68e-07,24;CL:0000473,8.07e-07,48;CL:0000234,8.07e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-12;18!CL:0000051;2.70e-11;53!CL:0002057;8.56e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.28e-07,98;UBERON:0003061,6.28e-07,98 | |||
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| ||
|short_description=p1@RPL30 | |||
}} | }} |
Latest revision as of 16:26, 19 September 2015
Short description: | p1@RPL30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL30_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000396070, ENST00000518164, ENST00000518850, ENST00000520998, ENST00000521112, ENST00000523172, uc003yif.2, uc010mbk.1_5end |
EntrezGene: | RPL30 |
HGNC: | 10333 |
UniProt: | E5RJH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 7.71e-22 | 115 |
lymphocyte | 6.18e-18 | 53 |
common lymphoid progenitor | 6.18e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.29e-17 | 52 |
hematopoietic lineage restricted progenitor cell | 2.82e-17 | 120 |
hematopoietic stem cell | 6.06e-17 | 168 |
leukocyte | 6.81e-17 | 136 |
hematopoietic cell | 8.14e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.62e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.62e-14 | 161 |
mature alpha-beta T cell | 1.59e-12 | 18 |
alpha-beta T cell | 1.59e-12 | 18 |
immature T cell | 1.59e-12 | 18 |
mature T cell | 1.59e-12 | 18 |
immature alpha-beta T cell | 1.59e-12 | 18 |
T cell | 4.66e-11 | 25 |
pro-T cell | 4.66e-11 | 25 |
classical monocyte | 2.22e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.22e-10 | 42 |
B cell | 4.41e-09 | 14 |
CD8-positive, alpha-beta T cell | 2.39e-08 | 11 |
lymphocyte of B lineage | 6.68e-07 | 24 |
pro-B cell | 6.68e-07 | 24 |
defensive cell | 8.07e-07 | 48 |
phagocyte | 8.07e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.28e-07 | 98 |
blood island | 6.28e-07 | 98 |