FFCP PHASE1:Hg19::chr6:72596184..72596196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-209bp_to_ENST00000370419,ENST00000491071_5end | |association_with_transcript=-209bp_to_ENST00000370419,ENST00000491071_5end | ||
|cluster_id=chr6:72596184..72596196,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_16_at_RIMS1_5end | |description=CAGE_peak_16_at_RIMS1_5end | ||
|id=chr6:72596184..72596196,+ | |id=chr6:72596184..72596196,+ | ||
|ontology_enrichment_celltype=CL:0002580!1.47e-09!3;CL:0002579!7.15e-09!3;CL:0002334!5.41e-08!12;CL:0002617!1.87e-07!2;CL:0000197!2.80e-07!6;CL:0000098!2.80e-07!6;CL:0002167!2.80e-07!6;CL:0002620!4.94e-07!23 | |ontology_enrichment_celltype=CL:0002580!1.47e-09!3;CL:0002579!7.15e-09!3;CL:0002334!5.41e-08!12;CL:0002617!1.87e-07!2;CL:0000197!2.80e-07!6;CL:0000098!2.80e-07!6;CL:0002167!2.80e-07!6;CL:0002620!4.94e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002617;1.86e-31;2!CL:0000511;1.78e-16;1!CL:0002625;1.78e-16;1!CL:0000216;1.78e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,1.37e-31,2;CL:0000511,1.41e-16,1;CL:0002625,1.41e-16,1;CL:0000216,1.41e-16,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.73e-47;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;6.20e-24;6!UBERON:0001136;1.78e-16;1!UBERON:0001343;1.78e-16;1!UBERON:0004910;1.78e-16;1!UBERON:0004813;1.78e-16;1!UBERON:0002680;3.42e-16;9!UBERON:0001895;3.42e-16;9!UBERON:0000310;2.38e-14;10!UBERON:0001443;4.20e-13;11!UBERON:0004733;2.65e-12;12!UBERON:0002028;2.65e-12;12!UBERON:0004732;2.10e-11;13!UBERON:0004909;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.74e-24,6;UBERON:0006215,5.74e-24,6;UBERON:0001136,1.41e-16,1;UBERON:0001343,1.41e-16,1;UBERON:0004910,1.41e-16,1;UBERON:0005154,1.41e-16,1;UBERON:0005295,1.41e-16,1;UBERON:0004813,1.41e-16,1;UBERON:0005297,1.41e-16,1;UBERON:0005294,1.41e-16,1;UBERON:0010141,1.41e-16,1;UBERON:0005891,1.41e-16,1;UBERON:0002680,3.25e-16,9;UBERON:0001895,3.25e-16,9;UBERON:0010092,3.25e-16,9;UBERON:0000310,2.44e-14,10;UBERON:0001443,4.29e-13,11;UBERON:0004733,2.55e-12,12;UBERON:0002028,2.55e-12,12;UBERON:0007277,2.55e-12,12;UBERON:0004732,2.03e-11,13;UBERON:0003076,5.66e-10,15;UBERON:0003057,5.66e-10,15;UBERON:0004909,5.94e-09,2 | |||
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| ||
|short_description=p16@RIMS1 | |short_description=p16@RIMS1 | ||
}} | }} |
Latest revision as of 16:22, 19 September 2015
Short description: | p16@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RIMS1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -209bp_to_ENST00000370419, ENST00000491071_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 1.37e-31 | 2 |
androgen binding protein secreting cell | 1.41e-16 | 1 |
seminiferous tubule epithelial cell | 1.41e-16 | 1 |
Sertoli cell | 1.41e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.74e-24 | 6 |
rhombic lip | 5.74e-24 | 6 |
mesothelium | 1.41e-16 | 1 |
seminiferous tubule of testis | 1.41e-16 | 1 |
epithelium of male gonad | 1.41e-16 | 1 |
epithelial cord | 1.41e-16 | 1 |
sex cord | 1.41e-16 | 1 |
seminiferous tubule epithelium | 1.41e-16 | 1 |
testis sex cord | 1.41e-16 | 1 |
genital ridge | 1.41e-16 | 1 |
primitive sex cord of indifferent gonad | 1.41e-16 | 1 |
coelomic epithelium | 1.41e-16 | 1 |
regional part of metencephalon | 3.25e-16 | 9 |
metencephalon | 3.25e-16 | 9 |
future metencephalon | 3.25e-16 | 9 |
breast | 2.44e-14 | 10 |
chest | 4.29e-13 | 11 |
segmental subdivision of hindbrain | 2.55e-12 | 12 |
hindbrain | 2.55e-12 | 12 |
presumptive hindbrain | 2.55e-12 | 12 |
segmental subdivision of nervous system | 2.03e-11 | 13 |
posterior neural tube | 5.66e-10 | 15 |
chordal neural plate | 5.66e-10 | 15 |
epithelium of gonad | 5.94e-09 | 2 |