FFCP PHASE1:Hg19::chr3:77089214..77089314,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCK4 | |UniProt=Q9HCK4 | ||
|association_with_transcript=0bp_to_NM_002942,uc003dpy.3,uc003dpz.2,uc011bgj.1,uc011bgk.1_5end | |association_with_transcript=0bp_to_NM_002942,uc003dpy.3,uc003dpz.2,uc011bgj.1,uc011bgk.1_5end | ||
|cluster_id=chr3:77089214..77089314,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_ROBO2_5end | |description=CAGE_peak_1_at_ROBO2_5end | ||
|id=chr3:77089214..77089314,+ | |id=chr3:77089214..77089314,+ | ||
|ontology_enrichment_celltype=CL:0000133!2.51e-08!59;CL:0000221!4.91e-07!71 | |ontology_enrichment_celltype=CL:0000133!2.51e-08!59;CL:0000221!4.91e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.20e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.84e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-34!82;UBERON:0005743!7.47e-33!86;UBERON:0000073!2.52e-32!94;UBERON:0001016!2.52e-32!94;UBERON:0000924!6.28e-32!173;UBERON:0006601!6.28e-32!173;UBERON:0004121!2.58e-29!169;UBERON:0001049!1.28e-28!57;UBERON:0005068!1.28e-28!57;UBERON:0006241!1.28e-28!57;UBERON:0007135!1.28e-28!57;UBERON:0002346!5.42e-28!90;UBERON:0000955!1.38e-26!69;UBERON:0006238!1.38e-26!69;UBERON:0002616!1.70e-26!59;UBERON:0000153!1.39e-25!129;UBERON:0007811!1.39e-25!129;UBERON:0007023!2.95e-25!115;UBERON:0003075!3.68e-25!86;UBERON:0007284!3.68e-25!86;UBERON:0000033!1.02e-24!123;UBERON:0002780!7.80e-24!41;UBERON:0001890!7.80e-24!41;UBERON:0006240!7.80e-24!41;UBERON:0003080!7.46e-23!42;UBERON:0001893!2.06e-21!34;UBERON:0002020!3.47e-21!34;UBERON:0003528!3.47e-21!34;UBERON:0002791!9.70e-21!33;UBERON:0001869!1.57e-20!32;UBERON:0003056!1.89e-19!61;UBERON:0000956!6.28e-16!25;UBERON:0000203!6.28e-16!25;UBERON:0002619!4.98e-15!22;UBERON:0001950!7.27e-14!20;UBERON:0000475!2.08e-13!365;UBERON:0000064!7.17e-12!219;UBERON:0000481!2.55e-11!347;UBERON:0000062!3.91e-09!511;UBERON:0000468!2.04e-08!659;UBERON:0000922!4.77e-08!612;UBERON:0002420!4.72e-07!9;UBERON:0007245!4.72e-07!9;UBERON:0010009!4.72e-07!9;UBERON:0010011!4.72e-07!9;UBERON:0000454!4.72e-07!9;UBERON:0003076!5.23e-07!15;UBERON:0003057!5.23e-07!15;UBERON:0000119!7.78e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.85e-24;32!UBERON:0002791;4.55e-24;32!UBERON:0003528;7.14e-24;34!UBERON:0002020;7.14e-24;34!UBERON:0001893;8.44e-24;34!UBERON:0002780;3.13e-22;41!UBERON:0001890;3.13e-22;41!UBERON:0002619;2.48e-20;22!UBERON:0000956;3.26e-20;25!UBERON:0000203;3.26e-20;25!UBERON:0000073;7.06e-20;53!UBERON:0002616;7.06e-20;53!UBERON:0001950;9.59e-19;20!UBERON:0000922;1.04e-15;49!UBERON:0000955;7.47e-15;68!UBERON:0001017;9.89e-15;75!UBERON:0001016;5.91e-14;83!UBERON:0002420;2.75e-09;9!UBERON:0007245;2.75e-09;9!UBERON:0010009;2.75e-09;9!UBERON:0010011;2.75e-09;9!UBERON:0000454;2.75e-09;9!UBERON:0000125;7.46e-09;9!UBERON:0002308;7.46e-09;9!UBERON:0011216;7.48e-08;132!UBERON:0009663;1.00e-07;7!UBERON:0001871;1.38e-07;6!UBERON:0007023;3.23e-07;114!UBERON:0002050;4.43e-07;5!UBERON:0005423;4.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.30e-39,81;UBERON:0001016,2.02e-38,89;UBERON:0001049,3.33e-38,56;UBERON:0005068,3.33e-38,56;UBERON:0006241,3.33e-38,56;UBERON:0007135,3.33e-38,56;UBERON:0000073,3.68e-35,53;UBERON:0002616,3.68e-35,53;UBERON:0002346,7.63e-35,86;UBERON:0004121,8.00e-34,171;UBERON:0000924,8.00e-34,171;UBERON:0006601,8.00e-34,171;UBERON:0003075,5.97e-31,82;UBERON:0007284,5.97e-31,82;UBERON:0002780,1.17e-30,41;UBERON:0001890,1.17e-30,41;UBERON:0003080,1.17e-30,41;UBERON:0006240,1.17e-30,41;UBERON:0000955,2.41e-30,68;UBERON:0006238,2.41e-30,68;UBERON:0010371,4.77e-29,104;UBERON:0001893,3.73e-28,34;UBERON:0003528,7.68e-28,34;UBERON:0002020,7.68e-28,34;UBERON:0001869,6.73e-27,32;UBERON:0002791,1.35e-26,32;UBERON:0003056,2.67e-24,61;UBERON:0010314,9.92e-24,132;UBERON:0011216,1.82e-23,223;UBERON:0007023,2.18e-22,114;UBERON:0002619,1.44e-20,22;UBERON:0000956,1.99e-20,25;UBERON:0000203,1.99e-20,25;UBERON:0001950,6.38e-19,20;UBERON:0002420,2.57e-09,9;UBERON:0007245,2.57e-09,9;UBERON:0010009,2.57e-09,9;UBERON:0010011,2.57e-09,9;UBERON:0000454,2.57e-09,9;UBERON:0000125,7.69e-09,9;UBERON:0002308,7.69e-09,9;UBERON:0003076,9.85e-09,15;UBERON:0003057,9.85e-09,15;UBERON:0009663,1.14e-07,7;UBERON:0001871,1.23e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0.369363174230364,0,0,2.86235987131057,0.684372125364421,1.12988375635323,0,0.0821005894499457,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,0.795285947051099,0.486634870302636,0,0,0.351339142772504,4.45328856692223,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0,1.36221684880438,0.576175924479999,0,0,0,0,1.17434498643765,5.6655530528846,4.21352420106745,9.59524604897998,1.47401180774122,5.3729406211398,0,0.247266929278557,0,0,8.58514181165738,8.63317787116553,23.8275139316397,0,0,0.300476117813194,0,3.04962380671065,4.05759038755278,0,0,0,4.3798891807757,4.28068769562657,0,0,0.504867548488229,0.368199594569197,4.36444353410792,0.710019185033229,0.201504196455281,0.508681776931463,0.386521706326594,0.272746120590835,0.286804595389004,0.975789649036763,0.795178609928912,3.83440011469411,3.42081481550722,1.7662459561294,1.45990943630332,15.6449532329816,39.8809381679589,13.8134921352481,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0.109750285408626,0,0,0.833296006426766,0.977424915930974,0,0,1.27523445472584,1.29149563659404,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0.6312121671319,1.39695367442772,0.763976851116555,1.17217447210047,0,1.54241239054985,0,4.85904935471983,0.560655421726804,0.43596006883328,0.66004457238855,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,1.01346914667305,0,0,0,0,0,0,40.6551398755941,39.0419561572865,28.6116860727747,24.4573747388149,32.5348763343113,0,0,0,0.36807447515742,0,0,0.207970861530807,12.3116002270042,2.36553622550902,0.234282829985426,0,0,1.03473071292505,0,0,15.725934218723,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.276242966807689,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,5.97637867556789,6.13515414282901,9.24106399110585,0,0,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,1.61885211824983,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.709522128141196,0,0,1.13841952129715,3.14941248220485,0,0,0,7.15492885903522,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12493582569533,22.1557318105882,14.8750623161791,0,14.098700508785,0,0,0.606802608747567,0,0,0,0,0,4.97073823883149,5.76744607283102,0,0,0,1.39473591775749,0.828851746593443,0,0,0,15.2409397954286,0,0,0,0.197286811273867,0,0,4.84666373047609,4.63840490809256,41.9188975802508,0,0,0,0,0,0.236387681767936,3.44743373241465,31.7849028587747,13.0218746199969,11.5146380155799,7.47697919477529,4.5774520895125,22.668748285901,13.0040952339561,5.92340572315726,0,0,2.6932590476329,0,0,0,0,0.31900115973192,0.824378340616761,0,0,0,21.9399420108206,1.57916962432026,1.37243774022418,1.00692952185506,2.27704479269022,31.6283792170954,0,0.816164040795739,0,1.29833183845255,2.98578579323551,0.530745387020035,7.33236173920351,0,0,0,2.49384192028505,3.21031058919516,5.62234669740814,0,0,0,0.394584402849391,6.04953580243319,56.6234609016407,0.126373159256976,2.40517471063188,5.18440956986236,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,4.46149475846729,0.0882561266915003,9.94315259434343,0,0,6.26776879963199,0,0.0801588202515337,0.85381197895741,0,0,71.0126896228677,32.4314545959113,0,0,0,0,0,0,0.288950589901519,10.2071449080664,2.0535806833799,0,0,0,1.11712960508902,0.229160424011684,0.717873024576814,0.199679000498991,0,0,7.59173239100007,0,0,0,0,0,0,0,4.77137813885582,5.72054305668618,0.964518890790115,1.51293380256957,2.07720169014593,0,0.77380195455795,7.47219546893703,0,0.630445658393585,20.1425618438393,2.21760706690754,0,0,0,0,0,0,0,0,0,9.76900996917134,0,0,0,5.30027555648885,2.58565912723101,2.77688463659649,0,0,6.40724475406168,28.1395706128402,4.14239055347196,0.496166021811951,0,0,0,0,0,0,0,14.4489768550216,6.2024772597689,4.6369980662746,2.6290095448365,3.44045517414043,4.43716206147409,6.58221871178665,0.553394539744923,0.74988244777264,0.454947352624943,4.85291067026445,0,13.5817122683996,12.3182874319201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0.176689145945881,0,0,1.02496607435179,0,0,3.17994403148981,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.767366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| ||
|short_description=p1@ROBO2 | |short_description=p1@ROBO2 | ||
}} | }} |
Latest revision as of 16:11, 19 September 2015
Short description: | p1@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ROBO2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_NM_002942, uc003dpy.3, uc003dpz.2, uc011bgj.1, uc011bgk.1_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | Q9HCK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.20e-07 | 8 |