FFCP PHASE2:Hg19::chr5:108745603..108745631,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9867 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17481 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17481 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O43164 | ||
|association_with_transcript=43bp_to_NM_014819,uc003kos.3_5end | |association_with_transcript=43bp_to_NM_014819,uc003kos.3_5end | ||
|cluster_id=chr5:108745603..108745631,- | |cluster_id=chr5:108745603..108745631,- |
Latest revision as of 16:11, 19 September 2015
Short description: | p1@PJA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PJA2_5end |
Coexpression cluster: | C4448_Neutrophils_pons_brain_frontal_Eosinophils_Mast_spinal |
Association with transcript: | 43bp_to_NM_014819, uc003kos.3_5end |
EntrezGene: | PJA2 |
HGNC: | 17481 |
UniProt: | O43164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PJA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.14e-11 | 72 |
myeloid lineage restricted progenitor cell | 9.96e-09 | 66 |
leukocyte | 2.85e-08 | 136 |
granulocyte monocyte progenitor cell | 7.80e-08 | 67 |
monopoietic cell | 5.10e-07 | 59 |
monocyte | 5.10e-07 | 59 |
monoblast | 5.10e-07 | 59 |
promonocyte | 5.10e-07 | 59 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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adult organism | 1.63e-38 | 114 |
neural tube | 4.40e-21 | 56 |
neural rod | 4.40e-21 | 56 |
future spinal cord | 4.40e-21 | 56 |
neural keel | 4.40e-21 | 56 |
regional part of nervous system | 3.33e-20 | 53 |
regional part of brain | 3.33e-20 | 53 |
regional part of forebrain | 2.27e-19 | 41 |
forebrain | 2.27e-19 | 41 |
anterior neural tube | 2.27e-19 | 41 |
Showing 1 to 10 of 39 entries